RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 MCMDC2Q4G0Z9 681 aa17.08■□□□□ 0.32
ITGB4-208ENST00000582629 MFSD5Q6N075 450 aa17.08■□□□□ 0.32
ITGB4-208ENST00000582629 NOL8Q76FK4 1167 aaKnown RBP17.08■□□□□ 0.32
ITGB4-208ENST00000582629 FAM227BQ96M60 508 aa17.08■□□□□ 0.32
ITGB4-208ENST00000582629 RANBP17Q9H2T7 1088 aaKnown RBP17.08■□□□□ 0.32
ITGB4-208ENST00000582629 TTYH1Q9H313 450 aaPredicted RBP17.08■□□□□ 0.32
ITGB4-208ENST00000582629 CYP39A1Q9NYL5 469 aa17.08■□□□□ 0.32
ITGB4-208ENST00000582629 CCPG1Q9ULG6 757 aa17.08■□□□□ 0.32
ITGB4-208ENST00000582629 A0A0D9SFI3 127 aa17.07■□□□□ 0.32
ITGB4-208ENST00000582629 TLR3O15455 904 aaKnown RBP17.07■□□□□ 0.32
ITGB4-208ENST00000582629 FGAP02671 866 aa17.07■□□□□ 0.32
ITGB4-208ENST00000582629 ICAM1P05362 532 aa17.07■□□□□ 0.32
ITGB4-208ENST00000582629 TOP1P11387 765 aaKnown RBP17.07■□□□□ 0.32
ITGB4-208ENST00000582629 PPIGQ13427 754 aaKnown RBP eCLIP17.07■□□□□ 0.32
ITGB4-208ENST00000582629 MUM1L1Q5H9M0 696 aa17.07■□□□□ 0.32
ITGB4-208ENST00000582629 RRP12Q5JTH9 1297 aaKnown RBP17.07■□□□□ 0.32
ITGB4-208ENST00000582629 BTNL9Q6UXG8 535 aa17.07■□□□□ 0.32
ITGB4-208ENST00000582629 TLK2Q86UE8 772 aa17.07■□□□□ 0.32
ITGB4-208ENST00000582629 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.07■□□□□ 0.32
ITGB4-208ENST00000582629 TCP11L1Q9NUJ3 509 aa17.07■□□□□ 0.32
ITGB4-208ENST00000582629 GNEQ9Y223 722 aaKnown RBP17.07■□□□□ 0.32
ITGB4-208ENST00000582629 CUL9Q8IWT3 2517 aa17.07■□□□□ 0.32
ITGB4-208ENST00000582629 ASTN1O14525 1302 aa17.06■□□□□ 0.32
ITGB4-208ENST00000582629 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.06■□□□□ 0.32
ITGB4-208ENST00000582629 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.06■□□□□ 0.32
ITGB4-208ENST00000582629 CABYRO75952 493 aa17.06■□□□□ 0.32
ITGB4-208ENST00000582629 BEX3Q00994 111 aa17.06■□□□□ 0.32
ITGB4-208ENST00000582629 SYDE2Q5VT97 1194 aa17.06■□□□□ 0.32
ITGB4-208ENST00000582629 NSMFQ6X4W1 530 aa17.06■□□□□ 0.32
ITGB4-208ENST00000582629 FAM126BQ8IXS8 530 aa17.06■□□□□ 0.32
ITGB4-208ENST00000582629 AP5M1Q9H0R1 490 aa17.06■□□□□ 0.32
ITGB4-208ENST00000582629 UNC80Q8N2C7 3258 aa17.05■□□□□ 0.32
ITGB4-208ENST00000582629 ZEB2O60315 1214 aa17.05■□□□□ 0.32
ITGB4-208ENST00000582629 HSPD1P10809 573 aaKnown RBP17.05■□□□□ 0.32
ITGB4-208ENST00000582629 PCP11498 1178 aaKnown RBP17.05■□□□□ 0.32
ITGB4-208ENST00000582629 SMPD1P17405 629 aa17.05■□□□□ 0.32
ITGB4-208ENST00000582629 NMIQ13287 307 aaPredicted RBP17.05■□□□□ 0.32
ITGB4-208ENST00000582629 FSCN1Q16658 493 aaKnown RBP17.05■□□□□ 0.32
ITGB4-208ENST00000582629 IQSEC1Q6DN90 963 aa17.05■□□□□ 0.32
ITGB4-208ENST00000582629 TTBK2Q6IQ55 1244 aa17.05■□□□□ 0.32
ITGB4-208ENST00000582629 CXCL17Q6UXB2 119 aa17.05■□□□□ 0.32
ITGB4-208ENST00000582629 TMEM199Q8N511 208 aa17.05■□□□□ 0.32
ITGB4-208ENST00000582629 MAFAQ8NHW3 353 aaPredicted RBP17.05■□□□□ 0.32
ITGB4-208ENST00000582629 MORC4Q8TE76 937 aa17.05■□□□□ 0.32
ITGB4-208ENST00000582629 MYLIPQ8WY64 445 aa17.05■□□□□ 0.32
ITGB4-208ENST00000582629 TMEM47Q9BQJ4 181 aa17.05■□□□□ 0.32
ITGB4-208ENST00000582629 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.05■□□□□ 0.32
ITGB4-208ENST00000582629 VTA1Q9NP79 307 aa17.05■□□□□ 0.32
ITGB4-208ENST00000582629 ADD3Q9UEY8 706 aaKnown RBP17.05■□□□□ 0.32
ITGB4-208ENST00000582629 Q9Y3F1 56 aa17.05■□□□□ 0.32
ITGB4-208ENST00000582629 CCDC171Q6TFL3 1326 aa17.04■□□□□ 0.32
ITGB4-208ENST00000582629 TRIM6-TRIM34B2RNG4 842 aa17.04■□□□□ 0.32
ITGB4-208ENST00000582629 SLC16A2P36021 539 aa17.04■□□□□ 0.32
ITGB4-208ENST00000582629 TAPT1Q6NXT6 567 aa17.04■□□□□ 0.32
ITGB4-208ENST00000582629 ZNF589Q86UQ0 364 aaPredicted RBP17.04■□□□□ 0.32
ITGB4-208ENST00000582629 FBXO16Q8IX29 292 aaPredicted RBP17.04■□□□□ 0.32
ITGB4-208ENST00000582629 SLC43A3Q8NBI5 491 aa17.04■□□□□ 0.32
ITGB4-208ENST00000582629 SEZ6LQ9BYH1 1024 aa17.04■□□□□ 0.32
ITGB4-208ENST00000582629 PPP1R12CQ9BZL4 782 aa17.04■□□□□ 0.32
ITGB4-208ENST00000582629 PDGFCQ9NRA1 345 aa17.04■□□□□ 0.32
ITGB4-208ENST00000582629 PNMA2Q9UL42 364 aa17.04■□□□□ 0.32
ITGB4-208ENST00000582629 DDX49Q9Y6V7 483 aaKnown RBP17.04■□□□□ 0.32
ITGB4-208ENST00000582629 A0A0C4DFX4 3053 aa17.03■□□□□ 0.32
ITGB4-208ENST00000582629 FRMPD2Q68DX3 1309 aaPredicted RBP17.03■□□□□ 0.32
ITGB4-208ENST00000582629 LOC102724159A0A0B4J2E5 919 aa17.03■□□□□ 0.32
ITGB4-208ENST00000582629 DYNC1LI2O43237 492 aaPredicted RBP17.03■□□□□ 0.32
ITGB4-208ENST00000582629 CD4P01730 458 aa17.03■□□□□ 0.32
ITGB4-208ENST00000582629 PDHBP11177 359 aa17.03■□□□□ 0.32
ITGB4-208ENST00000582629 FOSL2P15408 326 aa17.03■□□□□ 0.32
ITGB4-208ENST00000582629 DNAJB2P25686 324 aa17.03■□□□□ 0.32
ITGB4-208ENST00000582629 AAMPQ13685 434 aa17.03■□□□□ 0.32
ITGB4-208ENST00000582629 PWP2Q15269 919 aaKnown RBP17.03■□□□□ 0.32
ITGB4-208ENST00000582629 PSRC1Q6PGN9 363 aaPredicted RBP17.03■□□□□ 0.32
ITGB4-208ENST00000582629 EEPD1Q7L9B9 569 aa17.03■□□□□ 0.32
ITGB4-208ENST00000582629 TTC14Q96N46 770 aa17.03■□□□□ 0.32
ITGB4-208ENST00000582629 LNPKQ9C0E8 428 aa17.03■□□□□ 0.32
ITGB4-208ENST00000582629 CSF2RAP15509 400 aa17.02■□□□□ 0.32
ITGB4-208ENST00000582629 ALDH5A1P51649 535 aaPredicted RBP17.02■□□□□ 0.32
ITGB4-208ENST00000582629 MFAP1P55081 439 aaKnown RBP17.02■□□□□ 0.32
ITGB4-208ENST00000582629 HAND2P61296 217 aa17.02■□□□□ 0.32
ITGB4-208ENST00000582629 ITGA7Q13683 1181 aa17.02■□□□□ 0.32
ITGB4-208ENST00000582629 BAATQ14032 418 aaPredicted RBP17.02■□□□□ 0.32
ITGB4-208ENST00000582629 TMEM240Q5SV17 173 aa17.02■□□□□ 0.32
ITGB4-208ENST00000582629 AKNAD1Q5T1N1 836 aa17.02■□□□□ 0.32
ITGB4-208ENST00000582629 MFSD6Q6ZSS7 791 aa17.02■□□□□ 0.32
ITGB4-208ENST00000582629 KIAA1211Q6ZU35 1233 aa17.02■□□□□ 0.32
ITGB4-208ENST00000582629 C16orf59Q7L2K0 433 aa17.02■□□□□ 0.32
ITGB4-208ENST00000582629 RILPL2Q969X0 211 aa17.02■□□□□ 0.32
ITGB4-208ENST00000582629 PURBQ96QR8 312 aaKnown RBP17.02■□□□□ 0.32
ITGB4-208ENST00000582629 RNF41Q9H4P4 317 aaPredicted RBP17.02■□□□□ 0.32
ITGB4-208ENST00000582629 GPCPD1Q9NPB8 672 aa17.02■□□□□ 0.32
ITGB4-208ENST00000582629 LAMA4Q16363 1823 aa17.02■□□□□ 0.31
ITGB4-208ENST00000582629 PTPDC1A2A3K4 754 aa17.01■□□□□ 0.31
ITGB4-208ENST00000582629 NFIBO00712 420 aa17.01■□□□□ 0.31
ITGB4-208ENST00000582629 PTGS1P23219 599 aa17.01■□□□□ 0.31
ITGB4-208ENST00000582629 ZNF543Q08ER8 600 aa17.01■□□□□ 0.31
ITGB4-208ENST00000582629 DUSP28Q4G0W2 176 aa17.01■□□□□ 0.31
ITGB4-208ENST00000582629 RASIP1Q5U651 963 aa17.01■□□□□ 0.31
ITGB4-208ENST00000582629 TBC1D10CQ8IV04 446 aa17.01■□□□□ 0.31
ITGB4-208ENST00000582629 SMC5Q8IY18 1101 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms