RNA–Protein interactions for RNA: ENST00000582406.1

BPTF-215, Transcript of bromodomain PHD finger transcription factor, human

TSL 3

Gene BPTF, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BPTF-215	ENST00000582406	INTS4	Q96HW7	963 aa	Known RBP	4.62	□□□□□ -1.67
BPTF-215	ENST00000582406	CCDC140	Q96MF4	163 aa		4.62	□□□□□ -1.67
BPTF-215	ENST00000582406	MCMBP	Q9BTE3	642 aa		4.62	□□□□□ -1.67
BPTF-215	ENST00000582406	CYP26B1	Q9NR63	512 aa		4.62	□□□□□ -1.67
BPTF-215	ENST00000582406	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
BPTF-215	ENST00000582406	SIRPG	Q9P1W8	387 aa		4.62	□□□□□ -1.67
BPTF-215	ENST00000582406	ACSL6	Q9UKU0	697 aa		4.62	□□□□□ -1.67
BPTF-215	ENST00000582406	LRRC10B	A6NIK2	292 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	STXBP3	O00186	592 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	HRK	O00198	91 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	U2SURP	O15042	1029 aa	Known RBP	4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	FARP2	O94887	1054 aa	Predicted RBP	4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	KCNH1	O95259	989 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	ITGAV	P06756	1048 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	SEPHS1	P49903	392 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	GTF2IRD2B	Q6EKJ0	949 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	OGFOD2	Q6N063	350 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	LRP10	Q7Z4F1	713 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	GTF2IRD2	Q86UP8	949 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	NLGN2	Q8NFZ4	835 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	PPP1R14A	Q96A00	147 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	JMJD8	Q96S16	334 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	PLCD4	Q9BRC7	762 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	KRTAP4-8	Q9BYQ9	185 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	NKX2-4	Q9H2Z4	354 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	LRP2BP	Q9P2M1	347 aa		4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	EIF4G1	Q04637	1599 aa	Known RBP	4.61	□□□□□ -1.67
BPTF-215	ENST00000582406	IQCA1L	A6NCM1	817 aa		4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	EFEMP2	O95967	443 aa		4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	CP	P00450	1065 aa		4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	CAPNS1	P04632	268 aa		4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	SCG5	P05408	212 aa		4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	PAM	P19021	973 aa		4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	HOXC12	P31275	282 aa		4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	ARL4A	P40617	200 aa		4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	ERVFRD-1	P60508	538 aa		4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	MLANA	Q16655	118 aa		4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	DPY19L1	Q2PZI1	675 aa		4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	JAML	Q86YT9	394 aa		4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	CCDC113	Q9H0I3	377 aa		4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	EPB41L4B	Q9H329	900 aa		4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	ST7	Q9NRC1	585 aa		4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	PPP1R1B	Q9UD71	204 aa	Predicted RBP	4.6	□□□□□ -1.67
BPTF-215	ENST00000582406	PEX10	O60683	326 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	PRKCA	P17252	672 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	L1CAM	P32004	1257 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	CYP4F8	P98187	520 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	MESP2	Q0VG99	397 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	SCRN1	Q12765	414 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	SERINC3	Q13530	473 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	RASGRF1	Q13972	1273 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	TESK1	Q15569	626 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	PRR23B	Q6ZRT6	265 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	FBXO15	Q8NCQ5	510 aa	Predicted RBP	4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	NUP43	Q8NFH3	380 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	NPLOC4	Q8TAT6	608 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	BTN2A2	Q8WVV5	523 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	FAM84A	Q96KN4	292 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	MMP19	Q99542	508 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	NSUN3	Q9H649	340 aa	Known RBP	4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	ZNF552	Q9H707	407 aa	Predicted RBP	4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	TNFRSF12A	Q9NP84	129 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	IMPACT	Q9P2X3	320 aa		4.59	□□□□□ -1.67
BPTF-215	ENST00000582406	NPHP3-ACAD11	A0A0J9YXS1	232 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406		A0A1W2PQ27	194 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406		A0A1W2PQ64	194 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406		A0A1W2PQC6	194 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406		A0A1W2PQD8	194 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406		A0A1W2PQU0	124 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	OR14I1	A6ND48	311 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	ABLIM1	O14639	778 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	PDE6B	P35913	854 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	YBX1	P67809	324 aa	Known RBP	4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	MVK	Q03426	396 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	TMEM62	Q0P6H9	643 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	E4F1	Q66K89	784 aa	Predicted RBP	4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	OLFML2B	Q68BL8	750 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	IQCE	Q6IPM2	695 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	LRRC47	Q8N1G4	583 aa	Known RBP	4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	MKL1	Q969V6	931 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	SLC26A8	Q96RN1	970 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	PPP1R16B	Q96T49	567 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	PDLIM7	Q9NR12	457 aa		4.58	□□□□□ -1.68
BPTF-215	ENST00000582406	PDPK1	O15530	556 aa		4.57	□□□□□ -1.68
BPTF-215	ENST00000582406	SRGAP3	O43295	1099 aa		4.57	□□□□□ -1.68
BPTF-215	ENST00000582406	TBX1	O43435	398 aa		4.57	□□□□□ -1.68
BPTF-215	ENST00000582406	MPO	P05164	745 aa		4.57	□□□□□ -1.68
BPTF-215	ENST00000582406	THBD	P07204	575 aa		4.57	□□□□□ -1.68
BPTF-215	ENST00000582406	SNRPB2	P08579	225 aa	Known RBP	4.57	□□□□□ -1.68
BPTF-215	ENST00000582406	PLS3	P13797	630 aa		4.57	□□□□□ -1.68
BPTF-215	ENST00000582406	GFRA1	P56159	465 aa		4.57	□□□□□ -1.68
BPTF-215	ENST00000582406	PPP2R2A	P63151	447 aa		4.57	□□□□□ -1.68
BPTF-215	ENST00000582406	CYP4F3	Q08477	520 aa		4.57	□□□□□ -1.68
BPTF-215	ENST00000582406	MAP4K2	Q12851	820 aa		4.57	□□□□□ -1.68
BPTF-215	ENST00000582406	KCNAB2	Q13303	367 aa		4.57	□□□□□ -1.68
BPTF-215	ENST00000582406	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.57	□□□□□ -1.68

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