RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 ALDH8A1Q9H2A2 487 aaPredicted RBP19.08■□□□□ 0.64
RNF43-206ENST00000582293 ACAD9Q9H845 621 aa19.08■□□□□ 0.64
RNF43-206ENST00000582293 CWC22Q9HCG8 908 aaKnown RBP19.08■□□□□ 0.64
RNF43-206ENST00000582293 A1CFQ9NQ94 594 aaKnown RBP19.08■□□□□ 0.64
RNF43-206ENST00000582293 BAZ2BQ9UIF8 2168 aaKnown RBP19.08■□□□□ 0.64
RNF43-206ENST00000582293 PLXNA1Q9UIW2 1896 aa19.07■□□□□ 0.64
RNF43-206ENST00000582293 ZBTB5O15062 677 aa19.07■□□□□ 0.64
RNF43-206ENST00000582293 DHX16O60231 1041 aaKnown RBP19.07■□□□□ 0.64
RNF43-206ENST00000582293 SMARCA1P28370 1054 aa19.07■□□□□ 0.64
RNF43-206ENST00000582293 PDIA3P30101 505 aaKnown RBP19.07■□□□□ 0.64
RNF43-206ENST00000582293 FGD1P98174 961 aa19.07■□□□□ 0.64
RNF43-206ENST00000582293 ZNF792Q3KQV3 632 aa19.07■□□□□ 0.64
RNF43-206ENST00000582293 USH1GQ495M9 461 aa19.07■□□□□ 0.64
RNF43-206ENST00000582293 SLC9C1Q4G0N8 1177 aa19.07■□□□□ 0.64
RNF43-206ENST00000582293 FBXO40Q9UH90 709 aa19.07■□□□□ 0.64
RNF43-206ENST00000582293 MYH6P13533 1939 aa19.07■□□□□ 0.64
RNF43-206ENST00000582293 ASTN1O14525 1302 aa19.06■□□□□ 0.64
RNF43-206ENST00000582293 CNTNAP5Q8WYK1 1306 aa19.06■□□□□ 0.64
RNF43-206ENST00000582293 GOLGA8AA7E2F4 631 aa19.06■□□□□ 0.64
RNF43-206ENST00000582293 GOLGA8BA8MQT2 603 aa19.06■□□□□ 0.64
RNF43-206ENST00000582293 OPLAHO14841 1288 aa19.06■□□□□ 0.64
RNF43-206ENST00000582293 ADD1P35611 737 aaKnown RBP19.06■□□□□ 0.64
RNF43-206ENST00000582293 KCTD2Q14681 263 aa19.06■□□□□ 0.64
RNF43-206ENST00000582293 RTN1Q16799 776 aa19.06■□□□□ 0.64
RNF43-206ENST00000582293 SYNE3Q6ZMZ3 975 aa19.06■□□□□ 0.64
RNF43-206ENST00000582293 HOMER1Q86YM7 354 aa19.06■□□□□ 0.64
RNF43-206ENST00000582293 CYP39A1Q9NYL5 469 aa19.06■□□□□ 0.64
RNF43-206ENST00000582293 INHAP05111 366 aa19.05■□□□□ 0.64
RNF43-206ENST00000582293 GNAQP50148 359 aa19.05■□□□□ 0.64
RNF43-206ENST00000582293 AK2P54819 239 aa19.05■□□□□ 0.64
RNF43-206ENST00000582293 MTFR1Q15390 333 aa19.05■□□□□ 0.64
RNF43-206ENST00000582293 DPP9Q86TI2 863 aa19.05■□□□□ 0.64
RNF43-206ENST00000582293 FBXO11Q86XK2 927 aa19.05■□□□□ 0.64
RNF43-206ENST00000582293 CCDC82Q8N4S0 544 aa19.05■□□□□ 0.64
RNF43-206ENST00000582293 FAM133AQ8N9E0 248 aa19.05■□□□□ 0.64
RNF43-206ENST00000582293 PIBF1Q8WXW3 757 aa19.05■□□□□ 0.64
RNF43-206ENST00000582293 TBC1D5Q92609 795 aa19.05■□□□□ 0.64
RNF43-206ENST00000582293 MAML3Q96JK9 1138 aa19.05■□□□□ 0.64
RNF43-206ENST00000582293 PURBQ96QR8 312 aaKnown RBP19.05■□□□□ 0.64
RNF43-206ENST00000582293 LZTS2Q9BRK4 669 aa19.05■□□□□ 0.64
RNF43-206ENST00000582293 RBM28Q9NW13 759 aaKnown RBP19.05■□□□□ 0.64
RNF43-206ENST00000582293 RBBP6Q7Z6E9 1792 aaKnown RBP19.04■□□□□ 0.64
RNF43-206ENST00000582293 PNMA6FA0A0J9YX94 578 aa19.04■□□□□ 0.64
RNF43-206ENST00000582293 hCG_1642624A0A1W2PR95 340 aa19.04■□□□□ 0.64
RNF43-206ENST00000582293 METAP2P50579 478 aaKnown RBP eCLIP19.04■□□□□ 0.64
RNF43-206ENST00000582293 CNTN2Q02246 1040 aa19.04■□□□□ 0.64
RNF43-206ENST00000582293 MAP3K21Q5TCX8 1036 aa19.04■□□□□ 0.64
RNF43-206ENST00000582293 SLC30A10Q6XR72 485 aa19.04■□□□□ 0.64
RNF43-206ENST00000582293 ANKRD35Q8N283 1001 aa19.04■□□□□ 0.64
RNF43-206ENST00000582293 AMNQ9BXJ7 453 aa19.04■□□□□ 0.64
RNF43-206ENST00000582293 TPCN1Q9ULQ1 816 aa19.04■□□□□ 0.64
RNF43-206ENST00000582293 ABCB11O95342 1321 aa19.03■□□□□ 0.64
RNF43-206ENST00000582293 SOWAHBA6NEL2 793 aa19.03■□□□□ 0.64
RNF43-206ENST00000582293 HMGCRP04035 888 aa19.03■□□□□ 0.64
RNF43-206ENST00000582293 BAATQ14032 418 aaPredicted RBP19.03■□□□□ 0.64
RNF43-206ENST00000582293 NTRK3Q16288 839 aa19.03■□□□□ 0.64
RNF43-206ENST00000582293 OLFML2BQ68BL8 750 aa19.03■□□□□ 0.64
RNF43-206ENST00000582293 DDX11Q96FC9 970 aa19.03■□□□□ 0.64
RNF43-206ENST00000582293 ZNF274Q96GC6 653 aaPredicted RBP19.03■□□□□ 0.64
RNF43-206ENST00000582293 TBC1D32Q96NH3 1257 aa19.03■□□□□ 0.64
RNF43-206ENST00000582293 NCOA5Q9HCD5 579 aaKnown RBP19.03■□□□□ 0.64
RNF43-206ENST00000582293 PNMA2Q9UL42 364 aa19.03■□□□□ 0.64
RNF43-206ENST00000582293 NAP1L2Q9ULW6 460 aaPredicted RBP19.03■□□□□ 0.64
RNF43-206ENST00000582293 DIS3Q9Y2L1 958 aaKnown RBP19.03■□□□□ 0.64
RNF43-206ENST00000582293 BRCA2P51587 3418 aa19.02■□□□□ 0.64
RNF43-206ENST00000582293 LARGE1O95461 756 aa19.02■□□□□ 0.64
RNF43-206ENST00000582293 NEK4P51957 841 aa19.02■□□□□ 0.64
RNF43-206ENST00000582293 CCT2P78371 535 aaKnown RBP19.02■□□□□ 0.64
RNF43-206ENST00000582293 CACNB2Q08289 660 aaPredicted RBP19.02■□□□□ 0.64
RNF43-206ENST00000582293 NSMFQ6X4W1 530 aa19.02■□□□□ 0.64
RNF43-206ENST00000582293 PCDHA1Q9Y5I3 950 aa19.02■□□□□ 0.64
RNF43-206ENST00000582293 MYCP01106 439 aaPredicted RBP19.01■□□□□ 0.63
RNF43-206ENST00000582293 CYP2C19P33261 490 aa19.01■□□□□ 0.63
RNF43-206ENST00000582293 GHRHRQ02643 423 aa19.01■□□□□ 0.63
RNF43-206ENST00000582293 PPP2R5BQ15173 497 aa19.01■□□□□ 0.63
RNF43-206ENST00000582293 TRMT44Q8IYL2 757 aaKnown RBP19.01■□□□□ 0.63
RNF43-206ENST00000582293 RGS22Q8NE09 1264 aa19.01■□□□□ 0.63
RNF43-206ENST00000582293 TRPV1Q8NER1 839 aa19.01■□□□□ 0.63
RNF43-206ENST00000582293 RRP36Q96EU6 259 aaKnown RBP19.01■□□□□ 0.63
RNF43-206ENST00000582293 UNC93B1Q9H1C4 597 aa19.01■□□□□ 0.63
RNF43-206ENST00000582293 DDX49Q9Y6V7 483 aaKnown RBP19.01■□□□□ 0.63
RNF43-206ENST00000582293 PFASO15067 1338 aa19■□□□□ 0.63
RNF43-206ENST00000582293 POTEB2H3BUK9 544 aa19■□□□□ 0.63
RNF43-206ENST00000582293 PRKAR2AP13861 404 aaKnown RBP19■□□□□ 0.63
RNF43-206ENST00000582293 RPS6P62753 249 aaKnown RBP19■□□□□ 0.63
RNF43-206ENST00000582293 MAMDC4Q6UXC1 1216 aa19■□□□□ 0.63
RNF43-206ENST00000582293 ZNF467Q7Z7K2 595 aaPredicted RBP19■□□□□ 0.63
RNF43-206ENST00000582293 COL20A1Q9P218 1284 aa19■□□□□ 0.63
RNF43-206ENST00000582293 MRPL11Q9Y3B7 192 aaKnown RBP19■□□□□ 0.63
RNF43-206ENST00000582293 LRRC37A2A6NM11 1700 aa19■□□□□ 0.63
RNF43-206ENST00000582293 CCL5P13501 91 aa18.99■□□□□ 0.63
RNF43-206ENST00000582293 SCRN1Q12765 414 aa18.99■□□□□ 0.63
RNF43-206ENST00000582293 STK3Q13188 491 aa18.99■□□□□ 0.63
RNF43-206ENST00000582293 TYW1BQ6NUM6 668 aa18.99■□□□□ 0.63
RNF43-206ENST00000582293 RNF207Q6ZRF8 634 aa18.99■□□□□ 0.63
RNF43-206ENST00000582293 TINF2Q9BSI4 451 aa18.99■□□□□ 0.63
RNF43-206ENST00000582293 SLC5A4Q9NY91 659 aa18.99■□□□□ 0.63
RNF43-206ENST00000582293 BIN2Q9UBW5 565 aaPredicted RBP18.99■□□□□ 0.63
RNF43-206ENST00000582293 V9GY48 417 aaPredicted RBP18.99■□□□□ 0.63
RNF43-206ENST00000582293 CCDC196A0A1B0GTZ2 297 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms