RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 NSMFQ6X4W1 530 aa16.99■□□□□ 0.31
CCDC57-214ENST00000582040 NOL8Q76FK4 1167 aaKnown RBP16.99■□□□□ 0.31
CCDC57-214ENST00000582040 ZNF589Q86UQ0 364 aaPredicted RBP16.99■□□□□ 0.31
CCDC57-214ENST00000582040 DCAF4Q8WV16 495 aa16.99■□□□□ 0.31
CCDC57-214ENST00000582040 CDX2Q99626 313 aaPredicted RBP16.99■□□□□ 0.31
CCDC57-214ENST00000582040 TTYH1Q9H313 450 aaPredicted RBP16.99■□□□□ 0.31
CCDC57-214ENST00000582040 CYP39A1Q9NYL5 469 aa16.99■□□□□ 0.31
CCDC57-214ENST00000582040 A0A0C4DFX4 3053 aa16.98■□□□□ 0.31
CCDC57-214ENST00000582040 ARVCFO00192 962 aa16.98■□□□□ 0.31
CCDC57-214ENST00000582040 TIMP1P01033 207 aa16.98■□□□□ 0.31
CCDC57-214ENST00000582040 FGAP02671 866 aa16.98■□□□□ 0.31
CCDC57-214ENST00000582040 ICAM1P05362 532 aa16.98■□□□□ 0.31
CCDC57-214ENST00000582040 PTGS1P23219 599 aa16.98■□□□□ 0.31
CCDC57-214ENST00000582040 SLC16A2P36021 539 aa16.98■□□□□ 0.31
CCDC57-214ENST00000582040 CDK7P50613 346 aa16.98■□□□□ 0.31
CCDC57-214ENST00000582040 MCMDC2Q4G0Z9 681 aa16.98■□□□□ 0.31
CCDC57-214ENST00000582040 TTBK2Q6IQ55 1244 aa16.98■□□□□ 0.31
CCDC57-214ENST00000582040 TLK2Q86UE8 772 aa16.98■□□□□ 0.31
CCDC57-214ENST00000582040 FBXO16Q8IX29 292 aaPredicted RBP16.98■□□□□ 0.31
CCDC57-214ENST00000582040 LNPKQ9C0E8 428 aa16.98■□□□□ 0.31
CCDC57-214ENST00000582040 RANBP17Q9H2T7 1088 aaKnown RBP16.98■□□□□ 0.31
CCDC57-214ENST00000582040 SEMA6BQ9H3T3 888 aa16.98■□□□□ 0.31
CCDC57-214ENST00000582040 FRMPD2Q68DX3 1309 aaPredicted RBP16.97■□□□□ 0.31
CCDC57-214ENST00000582040 CCDC171Q6TFL3 1326 aa16.97■□□□□ 0.31
CCDC57-214ENST00000582040 TRIM6-TRIM34B2RNG4 842 aa16.97■□□□□ 0.31
CCDC57-214ENST00000582040 HSPD1P10809 573 aaKnown RBP16.97■□□□□ 0.31
CCDC57-214ENST00000582040 TOP1P11387 765 aaKnown RBP16.97■□□□□ 0.31
CCDC57-214ENST00000582040 HAND2P61296 217 aa16.97■□□□□ 0.31
CCDC57-214ENST00000582040 NKX3-2P78367 333 aa16.97■□□□□ 0.31
CCDC57-214ENST00000582040 SYDE2Q5VT97 1194 aa16.97■□□□□ 0.31
CCDC57-214ENST00000582040 MFSD5Q6N075 450 aa16.97■□□□□ 0.31
CCDC57-214ENST00000582040 CXCL17Q6UXB2 119 aa16.97■□□□□ 0.31
CCDC57-214ENST00000582040 EEPD1Q7L9B9 569 aa16.97■□□□□ 0.31
CCDC57-214ENST00000582040 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.97■□□□□ 0.317e-10■■■■■ 66.3
CCDC57-214ENST00000582040 FAM126BQ8IXS8 530 aa16.97■□□□□ 0.31
CCDC57-214ENST00000582040 MYLIPQ8WY64 445 aa16.97■□□□□ 0.31
CCDC57-214ENST00000582040 PURBQ96QR8 312 aaKnown RBP16.97■□□□□ 0.31
CCDC57-214ENST00000582040 TMEM47Q9BQJ4 181 aa16.97■□□□□ 0.31
CCDC57-214ENST00000582040 PPP1R12CQ9BZL4 782 aa16.97■□□□□ 0.31
CCDC57-214ENST00000582040 GNEQ9Y223 722 aaKnown RBP16.97■□□□□ 0.31
CCDC57-214ENST00000582040 TLR3O15455 904 aaKnown RBP16.96■□□□□ 0.31
CCDC57-214ENST00000582040 SMPD1P17405 629 aa16.96■□□□□ 0.31
CCDC57-214ENST00000582040 BTNL9Q6UXG8 535 aa16.96■□□□□ 0.31
CCDC57-214ENST00000582040 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.96■□□□□ 0.315e-7■■■□□ 18.9
CCDC57-214ENST00000582040 GPCPD1Q9NPB8 672 aa16.96■□□□□ 0.31
CCDC57-214ENST00000582040 PDGFCQ9NRA1 345 aa16.96■□□□□ 0.31
CCDC57-214ENST00000582040 LAMA4Q16363 1823 aa16.96■□□□□ 0.3
CCDC57-214ENST00000582040 TMEM265A0A087WTH1 108 aa16.95■□□□□ 0.3
CCDC57-214ENST00000582040 NFIBO00712 420 aa16.95■□□□□ 0.3
CCDC57-214ENST00000582040 PPIGQ13427 754 aaKnown RBP eCLIP16.95■□□□□ 0.32e-13■■□□□ 14.2
CCDC57-214ENST00000582040 FSCN1Q16658 493 aaKnown RBP16.95■□□□□ 0.3
CCDC57-214ENST00000582040 TAPT1Q6NXT6 567 aa16.95■□□□□ 0.3
CCDC57-214ENST00000582040 TBC1D10CQ8IV04 446 aa16.95■□□□□ 0.3
CCDC57-214ENST00000582040 MAFAQ8NHW3 353 aaPredicted RBP16.95■□□□□ 0.3
CCDC57-214ENST00000582040 RILPL2Q969X0 211 aa16.95■□□□□ 0.3
CCDC57-214ENST00000582040 AP5M1Q9H0R1 490 aa16.95■□□□□ 0.3
CCDC57-214ENST00000582040 VTA1Q9NP79 307 aa16.95■□□□□ 0.3
CCDC57-214ENST00000582040 TCP11L1Q9NUJ3 509 aa16.95■□□□□ 0.3
CCDC57-214ENST00000582040 DYNC1LI2O43237 492 aaPredicted RBP16.94■□□□□ 0.3
CCDC57-214ENST00000582040 PDHBP11177 359 aa16.94■□□□□ 0.3
CCDC57-214ENST00000582040 CSF2RAP15509 400 aa16.94■□□□□ 0.3
CCDC57-214ENST00000582040 DNAJB2P25686 324 aa16.94■□□□□ 0.3
CCDC57-214ENST00000582040 BAATQ14032 418 aaPredicted RBP16.94■□□□□ 0.3
CCDC57-214ENST00000582040 TMEM63BQ5T3F8 832 aa16.94■□□□□ 0.3
CCDC57-214ENST00000582040 SLC30A10Q6XR72 485 aa16.94■□□□□ 0.3
CCDC57-214ENST00000582040 TICAM2Q86XR7 235 aa16.94■□□□□ 0.3
CCDC57-214ENST00000582040 MORC4Q8TE76 937 aa16.94■□□□□ 0.3
CCDC57-214ENST00000582040 UNC80Q8N2C7 3258 aa16.94■□□□□ 0.3
CCDC57-214ENST00000582040 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.93■□□□□ 0.3
CCDC57-214ENST00000582040 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.93■□□□□ 0.3
CCDC57-214ENST00000582040 PTPDC1A2A3K4 754 aa16.93■□□□□ 0.3
CCDC57-214ENST00000582040 CABYRO75952 493 aa16.93■□□□□ 0.3
CCDC57-214ENST00000582040 FOSL2P15408 326 aa16.93■□□□□ 0.3
CCDC57-214ENST00000582040 ALDH5A1P51649 535 aaPredicted RBP16.93■□□□□ 0.3
CCDC57-214ENST00000582040 AKNAD1Q5T1N1 836 aa16.93■□□□□ 0.3
CCDC57-214ENST00000582040 IQSEC1Q6DN90 963 aa16.93■□□□□ 0.3
CCDC57-214ENST00000582040 B4GALNT3Q6L9W6 998 aa16.93■□□□□ 0.3
CCDC57-214ENST00000582040 MFSD6Q6ZSS7 791 aa16.93■□□□□ 0.3
CCDC57-214ENST00000582040 SMC5Q8IY18 1101 aa16.93■□□□□ 0.3
CCDC57-214ENST00000582040 TMEM199Q8N511 208 aa16.93■□□□□ 0.3
CCDC57-214ENST00000582040 SLC43A3Q8NBI5 491 aa16.93■□□□□ 0.3
CCDC57-214ENST00000582040 ADD3Q9UEY8 706 aaKnown RBP16.93■□□□□ 0.3
CCDC57-214ENST00000582040 NEDD4P46934 1319 aa16.93■□□□□ 0.3
CCDC57-214ENST00000582040 ZEB2O60315 1214 aa16.92■□□□□ 0.3
CCDC57-214ENST00000582040 CD4P01730 458 aa16.92■□□□□ 0.3
CCDC57-214ENST00000582040 PCP11498 1178 aaKnown RBP16.92■□□□□ 0.3
CCDC57-214ENST00000582040 CYP2C18P33260 490 aa16.92■□□□□ 0.3
CCDC57-214ENST00000582040 ZNF543Q08ER8 600 aa16.92■□□□□ 0.3
CCDC57-214ENST00000582040 ITGA7Q13683 1181 aa16.92■□□□□ 0.3
CCDC57-214ENST00000582040 TMEM240Q5SV17 173 aa16.92■□□□□ 0.3
CCDC57-214ENST00000582040 PSRC1Q6PGN9 363 aaPredicted RBP16.92■□□□□ 0.3
CCDC57-214ENST00000582040 KIAA1211Q6ZU35 1233 aa16.92■□□□□ 0.3
CCDC57-214ENST00000582040 C16orf59Q7L2K0 433 aa16.92■□□□□ 0.3
CCDC57-214ENST00000582040 GRIN2DO15399 1336 aa16.92■□□□□ 0.3
CCDC57-214ENST00000582040 SNHG28P0DPA3 235 aa16.91■□□□□ 0.3
CCDC57-214ENST00000582040 ACRP10323 421 aa16.91■□□□□ 0.3
CCDC57-214ENST00000582040 SDSP20132 328 aa16.91■□□□□ 0.3
CCDC57-214ENST00000582040 CALML3P27482 149 aa16.91■□□□□ 0.3
CCDC57-214ENST00000582040 MFAP1P55081 439 aaKnown RBP16.91■□□□□ 0.3
CCDC57-214ENST00000582040 PSMC6P62333 389 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms