RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.11■□□□□ 0.01
CSNK1D-218ENST00000581655 TRMT13Q9NUP7 481 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-218ENST00000581655 GREB1LQ9C091 1923 aaPredicted RBP15.11■□□□□ 0.01
CSNK1D-218ENST00000581655 KIF28PB7ZC32 967 aa15.1■□□□□ 0.01
CSNK1D-218ENST00000581655 NDUFB10O96000 172 aa15.1■□□□□ 0.01
CSNK1D-218ENST00000581655 SMPD1P17405 629 aa15.1■□□□□ 0.01
CSNK1D-218ENST00000581655 NHLH1Q02575 133 aa15.1■□□□□ 0.01
CSNK1D-218ENST00000581655 HERC6Q8IVU3 1022 aa15.1■□□□□ 0.01
CSNK1D-218ENST00000581655 GJD3Q8N144 294 aa15.1■□□□□ 0.01
CSNK1D-218ENST00000581655 PHOSPHO2Q8TCD6 241 aa15.1■□□□□ 0.01
CSNK1D-218ENST00000581655 SLC38A10Q9HBR0 1119 aa15.1■□□□□ 0.01
CSNK1D-218ENST00000581655 HOMER2Q9NSB8 354 aa15.1■□□□□ 0.01
CSNK1D-218ENST00000581655 SOWAHBA6NEL2 793 aa15.09■□□□□ 0.01
CSNK1D-218ENST00000581655 SUPT20HL2P0C7V6 817 aa15.09■□□□□ 0.01
CSNK1D-218ENST00000581655 TMEM63BQ5T3F8 832 aa15.09■□□□□ 0.01
CSNK1D-218ENST00000581655 FAM178BQ8IXR5 827 aa15.09■□□□□ 0.01
CSNK1D-218ENST00000581655 FAM133AQ8N9E0 248 aa15.09■□□□□ 0.01
CSNK1D-218ENST00000581655 PDGFCQ9NRA1 345 aa15.09■□□□□ 0.01
CSNK1D-218ENST00000581655 EXOC6BQ9Y2D4 811 aa15.09■□□□□ 0.01
CSNK1D-218ENST00000581655 DDX49Q9Y6V7 483 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-218ENST00000581655 TNKSO95271 1327 aa15.09■□□□□ 0.01
CSNK1D-218ENST00000581655 MYH4Q9Y623 1939 aa15.08■□□□□ 0
CSNK1D-218ENST00000581655 SSTR3P32745 418 aaPredicted RBP15.08■□□□□ 0
CSNK1D-218ENST00000581655 GDPD5Q8WTR4 605 aa15.08■□□□□ 0
CSNK1D-218ENST00000581655 DDRGK1Q96HY6 314 aa15.08■□□□□ 0
CSNK1D-218ENST00000581655 UBE2ZQ9H832 354 aaPredicted RBP15.08■□□□□ 0
CSNK1D-218ENST00000581655 IL1RAPL2Q9NP60 686 aa15.08■□□□□ 0
CSNK1D-218ENST00000581655 NYAP2Q9P242 653 aa15.08■□□□□ 0
CSNK1D-218ENST00000581655 PTPRSQ13332 1948 aa15.07■□□□□ 0
CSNK1D-218ENST00000581655 ASB14A6NK59 587 aa15.07■□□□□ 0
CSNK1D-218ENST00000581655 ADD2P35612 726 aa15.07■□□□□ 0
CSNK1D-218ENST00000581655 OAZ1P54368 228 aa15.07■□□□□ 0
CSNK1D-218ENST00000581655 CSPP1Q1MSJ5 1256 aa15.07■□□□□ 0
CSNK1D-218ENST00000581655 IQSEC1Q6DN90 963 aa15.07■□□□□ 0
CSNK1D-218ENST00000581655 CTR9Q6PD62 1173 aa15.07■□□□□ 0
CSNK1D-218ENST00000581655 EEPD1Q7L9B9 569 aa15.07■□□□□ 0
CSNK1D-218ENST00000581655 FBXO16Q8IX29 292 aaPredicted RBP15.07■□□□□ 0
CSNK1D-218ENST00000581655 FBXL18Q96ME1 805 aa15.07■□□□□ 0
CSNK1D-218ENST00000581655 FTOQ9C0B1 505 aaKnown RBP eCLIP15.07■□□□□ 04e-6■■■■■ 39.9
CSNK1D-218ENST00000581655 ACAD9Q9H845 621 aa15.07■□□□□ 0
CSNK1D-218ENST00000581655 A1CFQ9NQ94 594 aaKnown RBP15.07■□□□□ 0
CSNK1D-218ENST00000581655 COG6Q9Y2V7 657 aa15.07■□□□□ 0
CSNK1D-218ENST00000581655 TANC1Q9C0D5 1861 aa15.07■□□□□ 0
CSNK1D-218ENST00000581655 ZNF318Q5VUA4 2279 aa15.06■□□□□ 0
CSNK1D-218ENST00000581655 LCHNA4D1U4 455 aa15.06■□□□□ 0
CSNK1D-218ENST00000581655 ALADP13716 330 aa15.06■□□□□ 0
CSNK1D-218ENST00000581655 IL9P15248 144 aa15.06■□□□□ 0
CSNK1D-218ENST00000581655 RFC2P35250 354 aa15.06■□□□□ 0
CSNK1D-218ENST00000581655 TAPT1Q6NXT6 567 aa15.06■□□□□ 0
CSNK1D-218ENST00000581655 ERC1Q8IUD2 1116 aa15.06■□□□□ 0
CSNK1D-218ENST00000581655 RNF146Q9NTX7 359 aa15.06■□□□□ 0
CSNK1D-218ENST00000581655 LMCD1Q9NZU5 365 aa15.06■□□□□ 0
CSNK1D-218ENST00000581655 CLIP2Q9UDT6 1046 aa15.06■□□□□ 0
CSNK1D-218ENST00000581655 FEM1BQ9UK73 627 aa15.06■□□□□ 0
CSNK1D-218ENST00000581655 Q9Y3F1 56 aa15.06■□□□□ 0
CSNK1D-218ENST00000581655 ZBED9Q6R2W3 1325 aa15.06■□□□□ 0
CSNK1D-218ENST00000581655 CHGBP05060 677 aa15.05■□□□□ -0
CSNK1D-218ENST00000581655 IQCF3P0C7M6 154 aa15.05■□□□□ -0
CSNK1D-218ENST00000581655 RASA1P20936 1047 aa15.05■□□□□ -0
CSNK1D-218ENST00000581655 KCNA5P22460 613 aa15.05■□□□□ -0
CSNK1D-218ENST00000581655 LEXMQ3ZCV2 418 aa15.05■□□□□ -0
CSNK1D-218ENST00000581655 FAM47CQ5HY64 1035 aa15.05■□□□□ -0
CSNK1D-218ENST00000581655 STK11IPQ8N1F8 1099 aa15.05■□□□□ -0
CSNK1D-218ENST00000581655 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.05■□□□□ -0
CSNK1D-218ENST00000581655 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.05■□□□□ -0
CSNK1D-218ENST00000581655 SLC4A4Q9Y6R1 1079 aa15.05■□□□□ -0
CSNK1D-218ENST00000581655 TRIP12Q14669 1992 aaPredicted RBP15.05■□□□□ -0
CSNK1D-218ENST00000581655 SCN10AQ9Y5Y9 1956 aa15.04■□□□□ -0
CSNK1D-218ENST00000581655 ZNF536O15090 1300 aa15.04■□□□□ -0
CSNK1D-218ENST00000581655 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.04■□□□□ -0
CSNK1D-218ENST00000581655 KCNJ6P48051 423 aa15.04■□□□□ -0
CSNK1D-218ENST00000581655 PURAQ00577 322 aaKnown RBP15.04■□□□□ -0
CSNK1D-218ENST00000581655 KIAA1211Q6ZU35 1233 aa15.04■□□□□ -0
CSNK1D-218ENST00000581655 TMCO2Q7Z6W1 182 aaPredicted RBP15.04■□□□□ -0
CSNK1D-218ENST00000581655 RETREG2Q8NC44 543 aa15.04■□□□□ -0
CSNK1D-218ENST00000581655 PPP1R13LQ8WUF5 828 aa15.04■□□□□ -0
CSNK1D-218ENST00000581655 POLR3EQ9NVU0 708 aa15.04■□□□□ -0
CSNK1D-218ENST00000581655 MTUS1Q9ULD2 1270 aa15.04■□□□□ -0
CSNK1D-218ENST00000581655 PITPNM1O00562 1244 aa15.03■□□□□ -0
CSNK1D-218ENST00000581655 BAIAP3O94812 1187 aa15.03■□□□□ -0
CSNK1D-218ENST00000581655 MYL3P08590 195 aa15.03■□□□□ -0
CSNK1D-218ENST00000581655 ZKSCAN2Q63HK3 967 aa15.03■□□□□ -0
CSNK1D-218ENST00000581655 PTCRAQ6ISU1 281 aaPredicted RBP15.03■□□□□ -0
CSNK1D-218ENST00000581655 CEP85Q6P2H3 762 aa15.03■□□□□ -0
CSNK1D-218ENST00000581655 LRRC47Q8N1G4 583 aaKnown RBP15.03■□□□□ -0
CSNK1D-218ENST00000581655 KCNH6Q9H252 994 aa15.03■□□□□ -0
CSNK1D-218ENST00000581655 SUGCTQ9HAC7 445 aa15.03■□□□□ -0
CSNK1D-218ENST00000581655 MKNK2Q9HBH9 465 aa15.03■□□□□ -0
CSNK1D-218ENST00000581655 VTA1Q9NP79 307 aa15.03■□□□□ -0
CSNK1D-218ENST00000581655 PAG1Q9NWQ8 432 aa15.03■□□□□ -0
CSNK1D-218ENST00000581655 ARPP21Q9UBL0 812 aaPredicted RBP15.03■□□□□ -0
CSNK1D-218ENST00000581655 MYH7P12883 1935 aa15.03■□□□□ -0
CSNK1D-218ENST00000581655 LCTP09848 1927 aa15.02■□□□□ -0
CSNK1D-218ENST00000581655 IGKV6D-41A0A0C4DH26 115 aa15.02■□□□□ -0
CSNK1D-218ENST00000581655 DCXO43602 365 aa15.02■□□□□ -0
CSNK1D-218ENST00000581655 FDX1P10109 184 aa15.02■□□□□ -0
CSNK1D-218ENST00000581655 ALAS1P13196 640 aa15.02■□□□□ -0
CSNK1D-218ENST00000581655 WDR5P61964 334 aaKnown RBP15.02■□□□□ -0
CSNK1D-218ENST00000581655 NBPF20Q3BBV1 942 aa15.02■□□□□ -0
CSNK1D-218ENST00000581655 DUSP28Q4G0W2 176 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms