RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 FYB2Q5VWT5 728 aa6.95□□□□□ -1.3
SMCHD1-204ENST00000581226 EEF1DP3Q658K8 133 aa6.95□□□□□ -1.3
SMCHD1-204ENST00000581226 CYP2R1Q6VVX0 501 aa6.95□□□□□ -1.3
SMCHD1-204ENST00000581226 KSR1Q8IVT5 923 aa6.95□□□□□ -1.3
SMCHD1-204ENST00000581226 LRRC47Q8N1G4 583 aaKnown RBP6.95□□□□□ -1.3
SMCHD1-204ENST00000581226 ABHD4Q8TB40 342 aa6.95□□□□□ -1.3
SMCHD1-204ENST00000581226 KIRREL1Q96J84 757 aa6.95□□□□□ -1.3
SMCHD1-204ENST00000581226 SNRPB2P08579 225 aaKnown RBP6.94□□□□□ -1.3
SMCHD1-204ENST00000581226 HOXC12P31275 282 aa6.94□□□□□ -1.3
SMCHD1-204ENST00000581226 KCNJ6P48051 423 aa6.94□□□□□ -1.3
SMCHD1-204ENST00000581226 SSRP1Q08945 709 aaKnown RBP6.94□□□□□ -1.3
SMCHD1-204ENST00000581226 NR0B2Q15466 257 aa6.94□□□□□ -1.3
SMCHD1-204ENST00000581226 TIGD5Q53EQ6 642 aa6.94□□□□□ -1.3
SMCHD1-204ENST00000581226 HLA-DQA1Q5Y7H0 255 aa6.94□□□□□ -1.3
SMCHD1-204ENST00000581226 DPH6Q7L8W6 267 aa6.94□□□□□ -1.3
SMCHD1-204ENST00000581226 LILRA2Q8N149 483 aa6.94□□□□□ -1.3
SMCHD1-204ENST00000581226 CCDC140Q96MF4 163 aa6.94□□□□□ -1.3
SMCHD1-204ENST00000581226 SPATA9Q9BWV2 254 aa6.94□□□□□ -1.3
SMCHD1-204ENST00000581226 SP110Q9HB58 689 aa6.94□□□□□ -1.3
SMCHD1-204ENST00000581226 GPRC5CQ9NQ84 441 aa6.94□□□□□ -1.3
SMCHD1-204ENST00000581226 GPR160Q9UJ42 338 aa6.94□□□□□ -1.3
SMCHD1-204ENST00000581226 CDK11AQ9UQ88 783 aaPredicted RBP6.94□□□□□ -1.3
SMCHD1-204ENST00000581226 A0A1W2PQ45 241 aaPredicted RBP6.93□□□□□ -1.3
SMCHD1-204ENST00000581226 A0A1W2PQY0 241 aa6.93□□□□□ -1.3
SMCHD1-204ENST00000581226 PAPLNO95428 1278 aa6.93□□□□□ -1.3
SMCHD1-204ENST00000581226 JUNBP17275 347 aaPredicted RBP6.93□□□□□ -1.3
SMCHD1-204ENST00000581226 ITGB5P18084 799 aa6.93□□□□□ -1.3
SMCHD1-204ENST00000581226 ECI1P42126 302 aa6.93□□□□□ -1.3
SMCHD1-204ENST00000581226 GRIA2P42262 883 aa6.93□□□□□ -1.3
SMCHD1-204ENST00000581226 SF1Q15637 639 aaKnown RBP6.93□□□□□ -1.3
SMCHD1-204ENST00000581226 KCNMB1Q16558 191 aa6.93□□□□□ -1.3
SMCHD1-204ENST00000581226 LCE1DQ5T752 114 aa6.93□□□□□ -1.3
SMCHD1-204ENST00000581226 JAMLQ86YT9 394 aa6.93□□□□□ -1.3
SMCHD1-204ENST00000581226 COPS5Q92905 334 aa6.93□□□□□ -1.3
SMCHD1-204ENST00000581226 MRFAP1L1Q96HT8 127 aa6.93□□□□□ -1.3
SMCHD1-204ENST00000581226 DNAJC7Q99615 494 aa6.93□□□□□ -1.3
SMCHD1-204ENST00000581226 WTIPA6NIX2 430 aaPredicted RBP6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 NRDCO43847 1150 aa6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 PSPNO60542 156 aa6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 DIAPH1O60610 1272 aaKnown RBP6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 THBDP07204 575 aa6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 PLS3P13797 630 aa6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 PAMP19021 973 aa6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 CEBPAP49715 358 aaPredicted RBP6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 HSF5Q4G112 596 aaPredicted RBP6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 TMEM67Q5HYA8 995 aa6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 SLCO6A1Q86UG4 719 aa6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 ZSWIM9Q86XI8 627 aa6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 JMJD8Q96S16 334 aa6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 AARSD1Q9BTE6 412 aaKnown RBP6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 IER2Q9BTL4 223 aa6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 ARHGEF4Q9NR80 690 aa6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 CLEC1BQ9P126 229 aa6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 TAF6LQ9Y6J9 622 aa6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 KDM2BQ8NHM5 1336 aa6.92□□□□□ -1.3
SMCHD1-204ENST00000581226 TRBV23OR9-2A0A075B6M9 112 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 TRAV20A0A0B4J274 112 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 NPHP3-ACAD11A0A0J9YXS1 232 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 A0A1W2PQ27 194 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 A0A1W2PQ64 194 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 A0A1W2PQC6 194 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 A0A1W2PQD8 194 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 NOTOA8MTQ0 251 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 PAX4O43316 350 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 CPP00450 1065 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 CAPNS1P04632 268 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 GFRA1P56159 465 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 CYP4F3Q08477 520 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 LAPTM5Q13571 262 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 SNX17Q15036 470 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 PRSS53Q2L4Q9 553 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 GALNT18Q6P9A2 607 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 FAM168AQ92567 244 aa6.91□□□□□ -1.3
SMCHD1-204ENST00000581226 PRODHO43272 600 aa6.9□□□□□ -1.3
SMCHD1-204ENST00000581226 SCG5P05408 212 aa6.9□□□□□ -1.3
SMCHD1-204ENST00000581226 GLI1P08151 1106 aa6.9□□□□□ -1.3
SMCHD1-204ENST00000581226 L1CAMP32004 1257 aa6.9□□□□□ -1.3
SMCHD1-204ENST00000581226 GALK1P51570 392 aa6.9□□□□□ -1.3
SMCHD1-204ENST00000581226 CPNE8Q86YQ8 564 aa6.9□□□□□ -1.3
SMCHD1-204ENST00000581226 SIRT2Q8IXJ6 389 aa6.9□□□□□ -1.3
SMCHD1-204ENST00000581226 TMEM145Q8NBT3 493 aa6.9□□□□□ -1.3
SMCHD1-204ENST00000581226 FRS2Q8WU20 508 aa6.9□□□□□ -1.3
SMCHD1-204ENST00000581226 ASIC4Q96FT7 647 aa6.9□□□□□ -1.3
SMCHD1-204ENST00000581226 PLCD4Q9BRC7 762 aa6.9□□□□□ -1.3
SMCHD1-204ENST00000581226 RNF32Q9H0A6 362 aa6.9□□□□□ -1.3
SMCHD1-204ENST00000581226 ADCY3O60266 1144 aa6.89□□□□□ -1.31
SMCHD1-204ENST00000581226 FAM153BP0C7A2 387 aa6.89□□□□□ -1.31
SMCHD1-204ENST00000581226 FGFR1P11362 822 aa6.89□□□□□ -1.31
SMCHD1-204ENST00000581226 PABPC1P11940 636 aaKnown RBP6.89□□□□□ -1.31
SMCHD1-204ENST00000581226 PRKCAP17252 672 aa6.89□□□□□ -1.31
SMCHD1-204ENST00000581226 YOD1Q5VVQ6 348 aaPredicted RBP6.89□□□□□ -1.31
SMCHD1-204ENST00000581226 NSMFQ6X4W1 530 aa6.89□□□□□ -1.31
SMCHD1-204ENST00000581226 NLRX1Q86UT6 975 aa6.89□□□□□ -1.31
SMCHD1-204ENST00000581226 ZBTB38Q8NAP3 1195 aaPredicted RBP6.89□□□□□ -1.31
SMCHD1-204ENST00000581226 NUP43Q8NFH3 380 aa6.89□□□□□ -1.31
SMCHD1-204ENST00000581226 NPLOC4Q8TAT6 608 aa6.89□□□□□ -1.31
SMCHD1-204ENST00000581226 KCTD13Q8WZ19 329 aa6.89□□□□□ -1.31
SMCHD1-204ENST00000581226 CDC6Q99741 560 aa6.89□□□□□ -1.31
SMCHD1-204ENST00000581226 PIF1Q9H611 641 aa6.89□□□□□ -1.31
SMCHD1-204ENST00000581226 IMPACTQ9P2X3 320 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms