RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 B4E1Z4 1266 aa25.01■■□□□ 1.59
CSNK1D-216ENST00000581108 SNHG28P0DPA3 235 aa25.01■■□□□ 1.59
CSNK1D-216ENST00000581108 ACLYP53396 1101 aa25.01■■□□□ 1.59
CSNK1D-216ENST00000581108 TLE2Q04725 743 aa25.01■■□□□ 1.59
CSNK1D-216ENST00000581108 KCNA10Q16322 511 aa25.01■■□□□ 1.59
CSNK1D-216ENST00000581108 IMMTQ16891 758 aaKnown RBP25.01■■□□□ 1.59
CSNK1D-216ENST00000581108 PURBQ96QR8 312 aaKnown RBP25.01■■□□□ 1.59
CSNK1D-216ENST00000581108 ASB14A6NK59 587 aa25■■□□□ 1.59
CSNK1D-216ENST00000581108 CCSAPQ6IQ19 270 aaPredicted RBP25■■□□□ 1.59
CSNK1D-216ENST00000581108 SH3RF1Q7Z6J0 888 aa25■■□□□ 1.59
CSNK1D-216ENST00000581108 IQCA1Q86XH1 822 aa25■■□□□ 1.59
CSNK1D-216ENST00000581108 ZSWIM5Q9P217 1185 aa25■■□□□ 1.59
CSNK1D-216ENST00000581108 C6orf222P0C671 652 aaPredicted RBP24.99■■□□□ 1.59
CSNK1D-216ENST00000581108 GOLGA8HP0CJ92 632 aa24.99■■□□□ 1.59
CSNK1D-216ENST00000581108 LRIT3Q3SXY7 679 aa24.99■■□□□ 1.59
CSNK1D-216ENST00000581108 PDLIM7Q9NR12 457 aa24.99■■□□□ 1.59
CSNK1D-216ENST00000581108 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.98■■□□□ 1.59
CSNK1D-216ENST00000581108 TRIM43BA6NCK2 446 aa24.98■■□□□ 1.59
CSNK1D-216ENST00000581108 NFIBO00712 420 aa24.98■■□□□ 1.59
CSNK1D-216ENST00000581108 NT5C2P49902 561 aa24.98■■□□□ 1.59
CSNK1D-216ENST00000581108 GJA9P57773 515 aa24.98■■□□□ 1.59
CSNK1D-216ENST00000581108 BAATQ14032 418 aaPredicted RBP24.98■■□□□ 1.59
CSNK1D-216ENST00000581108 CCDC178Q5BJE1 867 aa24.98■■□□□ 1.59
CSNK1D-216ENST00000581108 PNMA1Q8ND90 353 aa24.98■■□□□ 1.59
CSNK1D-216ENST00000581108 ANKS1AQ92625 1134 aa24.98■■□□□ 1.59
CSNK1D-216ENST00000581108 TRIM43Q96BQ3 446 aaPredicted RBP24.98■■□□□ 1.59
CSNK1D-216ENST00000581108 ZSCAN10Q96SZ4 725 aaPredicted RBP24.98■■□□□ 1.59
CSNK1D-216ENST00000581108 MOXD2PA6NHM9 499 aa24.97■■□□□ 1.59
CSNK1D-216ENST00000581108 CST5P28325 142 aaPredicted RBP24.97■■□□□ 1.59
CSNK1D-216ENST00000581108 TNFAIP2Q03169 654 aa24.97■■□□□ 1.59
CSNK1D-216ENST00000581108 GPATCH4Q5T3I0 446 aaKnown RBP24.97■■□□□ 1.59
CSNK1D-216ENST00000581108 EEPD1Q7L9B9 569 aa24.97■■□□□ 1.59
CSNK1D-216ENST00000581108 NUP133Q8WUM0 1156 aa24.97■■□□□ 1.59
CSNK1D-216ENST00000581108 UBA5Q9GZZ9 404 aa24.97■■□□□ 1.59
CSNK1D-216ENST00000581108 UPF3AQ9H1J1 476 aaKnown RBP24.97■■□□□ 1.59
CSNK1D-216ENST00000581108 CPVLQ9H3G5 476 aa24.97■■□□□ 1.59
CSNK1D-216ENST00000581108 KAT14Q9H8E8 782 aa24.97■■□□□ 1.59
CSNK1D-216ENST00000581108 SPC25Q9HBM1 224 aa24.97■■□□□ 1.59
CSNK1D-216ENST00000581108 STARD7Q9NQZ5 370 aa24.97■■□□□ 1.59
CSNK1D-216ENST00000581108 CHMLP26374 656 aa24.96■■□□□ 1.59
CSNK1D-216ENST00000581108 GNASQ5JWF2 1037 aa24.96■■□□□ 1.59
CSNK1D-216ENST00000581108 ENAHQ8N8S7 591 aaPredicted RBP24.96■■□□□ 1.59
CSNK1D-216ENST00000581108 CLEC4DQ8WXI8 215 aa24.96■■□□□ 1.59
CSNK1D-216ENST00000581108 BADQ92934 168 aa24.96■■□□□ 1.59
CSNK1D-216ENST00000581108 KRT23Q9C075 422 aa24.96■■□□□ 1.59
CSNK1D-216ENST00000581108 PDGFCQ9NRA1 345 aa24.96■■□□□ 1.59
CSNK1D-216ENST00000581108 LRRC37A2A6NM11 1700 aa24.95■■□□□ 1.59
CSNK1D-216ENST00000581108 PQBP1O60828 265 aaKnown RBP24.95■■□□□ 1.58
CSNK1D-216ENST00000581108 ASGR1P07306 291 aa24.95■■□□□ 1.58
CSNK1D-216ENST00000581108 NOL8Q76FK4 1167 aaKnown RBP24.95■■□□□ 1.58
CSNK1D-216ENST00000581108 PCSK9Q8NBP7 692 aaKnown RBP24.95■■□□□ 1.58
CSNK1D-216ENST00000581108 CNNM2Q9H8M5 875 aa24.95■■□□□ 1.58
CSNK1D-216ENST00000581108 TNKSO95271 1327 aa24.94■■□□□ 1.58
CSNK1D-216ENST00000581108 PTPDC1A2A3K4 754 aa24.94■■□□□ 1.58
CSNK1D-216ENST00000581108 CTAGE5O15320 804 aa24.94■■□□□ 1.58
CSNK1D-216ENST00000581108 CLTBP09497 229 aa24.94■■□□□ 1.58
CSNK1D-216ENST00000581108 PTGS1P23219 599 aa24.94■■□□□ 1.58
CSNK1D-216ENST00000581108 TAPT1Q6NXT6 567 aa24.94■■□□□ 1.58
CSNK1D-216ENST00000581108 FBXO16Q8IX29 292 aaPredicted RBP24.94■■□□□ 1.58
CSNK1D-216ENST00000581108 GLT1D1Q96MS3 346 aa24.94■■□□□ 1.58
CSNK1D-216ENST00000581108 LAMA2P24043 3122 aaKnown RBP24.93■■□□□ 1.58
CSNK1D-216ENST00000581108 RAD50Q92878 1312 aa24.93■■□□□ 1.58
CSNK1D-216ENST00000581108 ITGB8P26012 769 aa24.93■■□□□ 1.58
CSNK1D-216ENST00000581108 CALML3P27482 149 aa24.93■■□□□ 1.58
CSNK1D-216ENST00000581108 BEX3Q00994 111 aa24.93■■□□□ 1.58
CSNK1D-216ENST00000581108 PTH1RQ03431 593 aa24.93■■□□□ 1.58
CSNK1D-216ENST00000581108 TMEM63BQ5T3F8 832 aa24.93■■□□□ 1.58
CSNK1D-216ENST00000581108 SLC30A10Q6XR72 485 aa24.93■■□□□ 1.58
CSNK1D-216ENST00000581108 MORC4Q8TE76 937 aa24.93■■□□□ 1.58
CSNK1D-216ENST00000581108 RUFY2Q8WXA3 655 aa24.93■■□□□ 1.58
CSNK1D-216ENST00000581108 VTI1AQ96AJ9 217 aa24.93■■□□□ 1.58
CSNK1D-216ENST00000581108 ADD3Q9UEY8 706 aaKnown RBP24.93■■□□□ 1.58
CSNK1D-216ENST00000581108 PNMA2Q9UL42 364 aa24.93■■□□□ 1.58
CSNK1D-216ENST00000581108 GNEQ9Y223 722 aaKnown RBP24.93■■□□□ 1.58
CSNK1D-216ENST00000581108 MYH6P13533 1939 aa24.92■■□□□ 1.58
CSNK1D-216ENST00000581108 WDR19Q8NEZ3 1342 aa24.92■■□□□ 1.58
CSNK1D-216ENST00000581108 SMPD1P17405 629 aa24.92■■□□□ 1.58
CSNK1D-216ENST00000581108 ALDH5A1P51649 535 aaPredicted RBP24.92■■□□□ 1.58
CSNK1D-216ENST00000581108 NKX3-2P78367 333 aa24.92■■□□□ 1.58
CSNK1D-216ENST00000581108 FAAP100Q0VG06 881 aa24.92■■□□□ 1.58
CSNK1D-216ENST00000581108 IQSEC1Q6DN90 963 aa24.92■■□□□ 1.58
CSNK1D-216ENST00000581108 RNF207Q6ZRF8 634 aa24.92■■□□□ 1.58
CSNK1D-216ENST00000581108 ANKRD33Q7Z3H0 272 aa24.92■■□□□ 1.58
CSNK1D-216ENST00000581108 UBAC1Q9BSL1 405 aa24.92■■□□□ 1.58
CSNK1D-216ENST00000581108 ELP1O95163 1332 aa24.91■■□□□ 1.58
CSNK1D-216ENST00000581108 USH1GQ495M9 461 aa24.91■■□□□ 1.58
CSNK1D-216ENST00000581108 GPR153Q6NV75 609 aa24.91■■□□□ 1.58
CSNK1D-216ENST00000581108 CYB5R4Q7L1T6 521 aa24.91■■□□□ 1.58
CSNK1D-216ENST00000581108 TLK2Q86UE8 772 aa24.91■■□□□ 1.58
CSNK1D-216ENST00000581108 ADGRF4Q8IZF3 695 aa24.91■■□□□ 1.58
CSNK1D-216ENST00000581108 TOX2Q96NM4 488 aa24.91■■□□□ 1.58
CSNK1D-216ENST00000581108 VTA1Q9NP79 307 aa24.91■■□□□ 1.58
CSNK1D-216ENST00000581108 TMEM39AQ9NV64 488 aa24.91■■□□□ 1.58
CSNK1D-216ENST00000581108 DCDC2CA8MYV0 355 aa24.9■■□□□ 1.58
CSNK1D-216ENST00000581108 KIAA0355O15063 1070 aa24.9■■□□□ 1.58
CSNK1D-216ENST00000581108 DYNC1LI2O43237 492 aaPredicted RBP24.9■■□□□ 1.58
CSNK1D-216ENST00000581108 CDK7P50613 346 aa24.9■■□□□ 1.58
CSNK1D-216ENST00000581108 RPS6P62753 249 aaKnown RBP24.9■■□□□ 1.58
CSNK1D-216ENST00000581108 SHHQ15465 462 aa24.9■■□□□ 1.58
CSNK1D-216ENST00000581108 ASPRV1Q53RT3 343 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms