RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 ACLYP53396 1101 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 SNAP25P60880 206 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 TLE2Q04725 743 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 CCDC144BQ3MJ40 725 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 MUM1L1Q5H9M0 696 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 TTBK2Q6IQ55 1244 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 CCDC174Q6PII3 467 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 DGKHQ86XP1 1220 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 ESR2Q92731 530 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 PDLIM7Q9NR12 457 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 CYP39A1Q9NYL5 469 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 ASTN1O14525 1302 aa14.68□□□□□ -0.06
SENP3-204ENST00000580997 TRIM43BA6NCK2 446 aa14.68□□□□□ -0.06
SENP3-204ENST00000580997 ASB14A6NK59 587 aa14.68□□□□□ -0.06
SENP3-204ENST00000580997 SLC16A2P36021 539 aa14.68□□□□□ -0.06
SENP3-204ENST00000580997 GJA9P57773 515 aa14.68□□□□□ -0.06
SENP3-204ENST00000580997 KCNA10Q16322 511 aa14.68□□□□□ -0.06
SENP3-204ENST00000580997 CCDC96Q2M329 555 aa14.68□□□□□ -0.06
SENP3-204ENST00000580997 ANKRD33Q7Z3H0 272 aa14.68□□□□□ -0.06
SENP3-204ENST00000580997 NUP133Q8WUM0 1156 aa14.68□□□□□ -0.06
SENP3-204ENST00000580997 ANKS1AQ92625 1134 aa14.68□□□□□ -0.06
SENP3-204ENST00000580997 TRIM43Q96BQ3 446 aaPredicted RBP14.68□□□□□ -0.06
SENP3-204ENST00000580997 TOX2Q96NM4 488 aa14.68□□□□□ -0.06
SENP3-204ENST00000580997 DSCC1Q9BVC3 393 aa14.68□□□□□ -0.06
SENP3-204ENST00000580997 UPF3AQ9H1J1 476 aaKnown RBP14.68□□□□□ -0.06
SENP3-204ENST00000580997 DIAPH3Q9NSV4 1193 aa14.68□□□□□ -0.06
SENP3-204ENST00000580997 CCPG1Q9ULG6 757 aa14.68□□□□□ -0.06
SENP3-204ENST00000580997 ZNF543Q08ER8 600 aa14.67□□□□□ -0.06
SENP3-204ENST00000580997 SYDE2Q5VT97 1194 aa14.67□□□□□ -0.06
SENP3-204ENST00000580997 SH3RF1Q7Z6J0 888 aa14.67□□□□□ -0.06
SENP3-204ENST00000580997 MORC4Q8TE76 937 aa14.67□□□□□ -0.06
SENP3-204ENST00000580997 GPCPD1Q9NPB8 672 aa14.67□□□□□ -0.06
SENP3-204ENST00000580997 MTMR7Q9Y216 660 aa14.67□□□□□ -0.06
SENP3-204ENST00000580997 ELP1O95163 1332 aa14.66□□□□□ -0.06
SENP3-204ENST00000580997 NEDD4P46934 1319 aa14.66□□□□□ -0.06
SENP3-204ENST00000580997 FRMPD2Q68DX3 1309 aaPredicted RBP14.66□□□□□ -0.06
SENP3-204ENST00000580997 MYADML2A6NDP7 307 aa14.66□□□□□ -0.06
SENP3-204ENST00000580997 KIAA0355O15063 1070 aa14.66□□□□□ -0.06
SENP3-204ENST00000580997 CTAGE5O15320 804 aa14.66□□□□□ -0.06
SENP3-204ENST00000580997 CLTBP09497 229 aa14.66□□□□□ -0.06
SENP3-204ENST00000580997 PDE4AP27815 886 aa14.66□□□□□ -0.06
SENP3-204ENST00000580997 CDK7P50613 346 aa14.66□□□□□ -0.06
SENP3-204ENST00000580997 IRX5P78411 483 aaPredicted RBP14.66□□□□□ -0.06
SENP3-204ENST00000580997 CCDC178Q5BJE1 867 aa14.66□□□□□ -0.06
SENP3-204ENST00000580997 PCSK9Q8NBP7 692 aaKnown RBP14.66□□□□□ -0.06
SENP3-204ENST00000580997 SPC25Q9HBM1 224 aa14.66□□□□□ -0.06
SENP3-204ENST00000580997 PRDM5Q9NQX1 630 aaPredicted RBP14.66□□□□□ -0.06
SENP3-204ENST00000580997 STARD7Q9NQZ5 370 aa14.66□□□□□ -0.06
SENP3-204ENST00000580997 CTNNA3Q9UI47 895 aa14.66□□□□□ -0.06
SENP3-204ENST00000580997 PNMA2Q9UL42 364 aa14.66□□□□□ -0.06
SENP3-204ENST00000580997 GNEQ9Y223 722 aaKnown RBP14.66□□□□□ -0.06
SENP3-204ENST00000580997 LOC102724159A0A0B4J2E5 919 aa14.65□□□□□ -0.06
SENP3-204ENST00000580997 KDM4AO75164 1064 aa14.65□□□□□ -0.06
SENP3-204ENST00000580997 ASGR1P07306 291 aa14.65□□□□□ -0.06
SENP3-204ENST00000580997 C6orf222P0C671 652 aaPredicted RBP14.65□□□□□ -0.06
SENP3-204ENST00000580997 ITGB8P26012 769 aa14.65□□□□□ -0.06
SENP3-204ENST00000580997 TNFAIP2Q03169 654 aa14.65□□□□□ -0.06
SENP3-204ENST00000580997 FAAP100Q0VG06 881 aa14.65□□□□□ -0.06
SENP3-204ENST00000580997 PWP2Q15269 919 aaKnown RBP14.65□□□□□ -0.06
SENP3-204ENST00000580997 GNASQ5JWF2 1037 aa14.65□□□□□ -0.06
SENP3-204ENST00000580997 GPATCH4Q5T3I0 446 aaKnown RBP14.65□□□□□ -0.06
SENP3-204ENST00000580997 TAPT1Q6NXT6 567 aa14.65□□□□□ -0.06
SENP3-204ENST00000580997 BADQ92934 168 aa14.65□□□□□ -0.06
SENP3-204ENST00000580997 GLT1D1Q96MS3 346 aa14.65□□□□□ -0.06
SENP3-204ENST00000580997 LTBP2Q14767 1821 aa14.64□□□□□ -0.07
SENP3-204ENST00000580997 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.64□□□□□ -0.07
SENP3-204ENST00000580997 GSPT1P15170 499 aaKnown RBP14.64□□□□□ -0.07
SENP3-204ENST00000580997 BAATQ14032 418 aaPredicted RBP14.64□□□□□ -0.07
SENP3-204ENST00000580997 IMMTQ16891 758 aaKnown RBP14.64□□□□□ -0.07
SENP3-204ENST00000580997 TTC22Q5TAA0 569 aa14.64□□□□□ -0.07
SENP3-204ENST00000580997 IQSEC1Q6DN90 963 aa14.64□□□□□ -0.07
SENP3-204ENST00000580997 NSMFQ6X4W1 530 aa14.64□□□□□ -0.07
SENP3-204ENST00000580997 IQCA1Q86XH1 822 aa14.64□□□□□ -0.07
SENP3-204ENST00000580997 DEFB123Q8N688 67 aa14.64□□□□□ -0.07
SENP3-204ENST00000580997 CLEC4DQ8WXI8 215 aa14.64□□□□□ -0.07
SENP3-204ENST00000580997 PURBQ96QR8 312 aaKnown RBP14.64□□□□□ -0.07
SENP3-204ENST00000580997 ZSCAN10Q96SZ4 725 aaPredicted RBP14.64□□□□□ -0.07
SENP3-204ENST00000580997 ZKSCAN3Q9BRR0 538 aa14.64□□□□□ -0.07
SENP3-204ENST00000580997 MAF1Q9H063 256 aa14.64□□□□□ -0.07
SENP3-204ENST00000580997 IL25Q9H293 177 aa14.64□□□□□ -0.07
SENP3-204ENST00000580997 ZSWIM5Q9P217 1185 aa14.64□□□□□ -0.07
SENP3-204ENST00000580997 Q9Y3F1 56 aa14.64□□□□□ -0.07
SENP3-204ENST00000580997 WDR19Q8NEZ3 1342 aa14.64□□□□□ -0.07
SENP3-204ENST00000580997 DCDC2CA8MYV0 355 aa14.63□□□□□ -0.07
SENP3-204ENST00000580997 NFIBO00712 420 aa14.63□□□□□ -0.07
SENP3-204ENST00000580997 PQBP1O60828 265 aaKnown RBP14.63□□□□□ -0.07
SENP3-204ENST00000580997 SHHQ15465 462 aa14.63□□□□□ -0.07
SENP3-204ENST00000580997 FAM109BQ6ICB4 259 aaPredicted RBP14.63□□□□□ -0.07
SENP3-204ENST00000580997 ENAHQ8N8S7 591 aaPredicted RBP14.63□□□□□ -0.07
SENP3-204ENST00000580997 PNMA1Q8ND90 353 aa14.63□□□□□ -0.07
SENP3-204ENST00000580997 VTA1Q9NP79 307 aa14.63□□□□□ -0.07
SENP3-204ENST00000580997 TMEM39AQ9NV64 488 aa14.63□□□□□ -0.07
SENP3-204ENST00000580997 ADD3Q9UEY8 706 aaKnown RBP14.63□□□□□ -0.07
SENP3-204ENST00000580997 DDX49Q9Y6V7 483 aaKnown RBP14.63□□□□□ -0.07
SENP3-204ENST00000580997 MROH7Q68CQ1 1323 aa14.63□□□□□ -0.07
SENP3-204ENST00000580997 SMPD1P17405 629 aa14.62□□□□□ -0.07
SENP3-204ENST00000580997 C9orf50Q5SZB4 431 aa14.62□□□□□ -0.07
SENP3-204ENST00000580997 Q7L0L9 218 aa14.62□□□□□ -0.07
SENP3-204ENST00000580997 SLC43A3Q8NBI5 491 aa14.62□□□□□ -0.07
SENP3-204ENST00000580997 RGS22Q8NE09 1264 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms