RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 XRCC5P13010 732 aaKnown RBP26.34■■□□□ 1.81
NDEL1-207ENST00000580012 IFNAR1P17181 557 aa26.34■■□□□ 1.81
NDEL1-207ENST00000580012 SLC4A3P48751 1232 aa26.34■■□□□ 1.81
NDEL1-207ENST00000580012 MAP2K5Q13163 448 aa26.34■■□□□ 1.81
NDEL1-207ENST00000580012 MUM1L1Q5H9M0 696 aa26.34■■□□□ 1.81
NDEL1-207ENST00000580012 HOMER1Q86YM7 354 aa26.34■■□□□ 1.81
NDEL1-207ENST00000580012 RGS22Q8NE09 1264 aa26.34■■□□□ 1.81
NDEL1-207ENST00000580012 MAF1Q9H063 256 aa26.34■■□□□ 1.81
NDEL1-207ENST00000580012 LIMCH1Q9UPQ0 1083 aa26.34■■□□□ 1.81
NDEL1-207ENST00000580012 CNTNAP5Q8WYK1 1306 aa26.34■■□□□ 1.81
NDEL1-207ENST00000580012 SCRN1Q12765 414 aa26.33■■□□□ 1.81
NDEL1-207ENST00000580012 TRAF1Q13077 416 aa26.33■■□□□ 1.81
NDEL1-207ENST00000580012 MMP19Q99542 508 aa26.33■■□□□ 1.81
NDEL1-207ENST00000580012 SLKQ9H2G2 1235 aaPredicted RBP26.33■■□□□ 1.81
NDEL1-207ENST00000580012 HOMER2Q9NSB8 354 aa26.33■■□□□ 1.81
NDEL1-207ENST00000580012 V9GY48 417 aaPredicted RBP26.33■■□□□ 1.81
NDEL1-207ENST00000580012 ABCB11O95342 1321 aa26.33■■□□□ 1.81
NDEL1-207ENST00000580012 DNAJC25-GNG10A0A024R161 153 aa26.32■■□□□ 1.8
NDEL1-207ENST00000580012 COBLO75128 1261 aa26.32■■□□□ 1.8
NDEL1-207ENST00000580012 ADORA2AP29274 412 aa26.32■■□□□ 1.8
NDEL1-207ENST00000580012 KCTD2Q14681 263 aa26.32■■□□□ 1.8
NDEL1-207ENST00000580012 FBXO46Q6PJ61 603 aaPredicted RBP26.32■■□□□ 1.8
NDEL1-207ENST00000580012 CWC22Q9HCG8 908 aaKnown RBP26.32■■□□□ 1.8
NDEL1-207ENST00000580012 PCDHA1Q9Y5I3 950 aa26.32■■□□□ 1.8
NDEL1-207ENST00000580012 PRPF3O43395 683 aaKnown RBP26.31■■□□□ 1.8
NDEL1-207ENST00000580012 LARGE1O95461 756 aa26.31■■□□□ 1.8
NDEL1-207ENST00000580012 IGHA2P01877 340 aa26.31■■□□□ 1.8
NDEL1-207ENST00000580012 RGS2P41220 211 aa26.31■■□□□ 1.8
NDEL1-207ENST00000580012 STK3Q13188 491 aa26.31■■□□□ 1.8
NDEL1-207ENST00000580012 USH1GQ495M9 461 aa26.31■■□□□ 1.8
NDEL1-207ENST00000580012 PIBF1Q8WXW3 757 aa26.31■■□□□ 1.8
NDEL1-207ENST00000580012 A1CFQ9NQ94 594 aaKnown RBP26.31■■□□□ 1.8
NDEL1-207ENST00000580012 MRPL11Q9Y3B7 192 aaKnown RBP26.31■■□□□ 1.8
NDEL1-207ENST00000580012 PTCH2Q9Y6C5 1203 aa26.31■■□□□ 1.8
NDEL1-207ENST00000580012 NFIBO00712 420 aa26.3■■□□□ 1.8
NDEL1-207ENST00000580012 ST18O60284 1047 aa26.3■■□□□ 1.8
NDEL1-207ENST00000580012 ZNF792Q3KQV3 632 aa26.3■■□□□ 1.8
NDEL1-207ENST00000580012 PXYLP1Q8TE99 480 aa26.3■■□□□ 1.8
NDEL1-207ENST00000580012 SEC63Q9UGP8 760 aaKnown RBP26.3■■□□□ 1.8
NDEL1-207ENST00000580012 DIS3Q9Y2L1 958 aaKnown RBP26.3■■□□□ 1.8
NDEL1-207ENST00000580012 hCG_1642624A0A1W2PR95 340 aa26.29■■□□□ 1.8
NDEL1-207ENST00000580012 OPLAHO14841 1288 aa26.29■■□□□ 1.8
NDEL1-207ENST00000580012 CYP2B6P20813 491 aa26.29■■□□□ 1.8
NDEL1-207ENST00000580012 GHRHRQ02643 423 aa26.29■■□□□ 1.8
NDEL1-207ENST00000580012 ANKRD35Q8N283 1001 aa26.29■■□□□ 1.8
NDEL1-207ENST00000580012 GTF3C6Q969F1 213 aa26.29■■□□□ 1.8
NDEL1-207ENST00000580012 ZSCAN31Q96LW9 406 aaPredicted RBP26.29■■□□□ 1.8
NDEL1-207ENST00000580012 CYP39A1Q9NYL5 469 aa26.29■■□□□ 1.8
NDEL1-207ENST00000580012 COL11A1P12107 1806 aaPredicted RBP26.29■■□□□ 1.8
NDEL1-207ENST00000580012 PKN1Q16512 942 aa26.28■■□□□ 1.8
NDEL1-207ENST00000580012 NOL8Q76FK4 1167 aaKnown RBP26.28■■□□□ 1.8
NDEL1-207ENST00000580012 NECAB1Q8N987 351 aa26.28■■□□□ 1.8
NDEL1-207ENST00000580012 NPLOC4Q8TAT6 608 aa26.28■■□□□ 1.8
NDEL1-207ENST00000580012 RAET1EQ8TD07 263 aa26.28■■□□□ 1.8
NDEL1-207ENST00000580012 RNF26Q9BY78 433 aaPredicted RBP26.28■■□□□ 1.8
NDEL1-207ENST00000580012 RBM27Q9P2N5 1060 aaKnown RBP26.28■■□□□ 1.8
NDEL1-207ENST00000580012 ZSWIM8A7E2V4 1837 aa26.28■■□□□ 1.8
NDEL1-207ENST00000580012 CD2BP2O95400 341 aaKnown RBP26.27■■□□□ 1.8
NDEL1-207ENST00000580012 CTDNEP1O95476 244 aa26.27■■□□□ 1.8
NDEL1-207ENST00000580012 PGK2P07205 417 aa26.27■■□□□ 1.8
NDEL1-207ENST00000580012 ST3GAL1Q11201 340 aa26.27■■□□□ 1.8
NDEL1-207ENST00000580012 BAATQ14032 418 aaPredicted RBP26.27■■□□□ 1.8
NDEL1-207ENST00000580012 PFKFB3Q16875 520 aaPredicted RBP26.27■■□□□ 1.8
NDEL1-207ENST00000580012 DPP9Q86TI2 863 aa26.27■■□□□ 1.8
NDEL1-207ENST00000580012 SAMD3Q8N6K7 520 aa26.27■■□□□ 1.8
NDEL1-207ENST00000580012 FAM133AQ8N9E0 248 aa26.27■■□□□ 1.8
NDEL1-207ENST00000580012 TBC1D5Q92609 795 aa26.27■■□□□ 1.8
NDEL1-207ENST00000580012 PHKBQ93100 1093 aa26.27■■□□□ 1.8
NDEL1-207ENST00000580012 DDX11Q96FC9 970 aa26.27■■□□□ 1.8
NDEL1-207ENST00000580012 APBA2Q99767 749 aa26.27■■□□□ 1.8
NDEL1-207ENST00000580012 PFASO15067 1338 aa26.27■■□□□ 1.8
NDEL1-207ENST00000580012 BAZ2BQ9UIF8 2168 aaKnown RBP26.26■■□□□ 1.79
NDEL1-207ENST00000580012 CPLX1O14810 134 aa26.26■■□□□ 1.79
NDEL1-207ENST00000580012 ADCY3O60266 1144 aa26.26■■□□□ 1.79
NDEL1-207ENST00000580012 MCM2P49736 904 aa26.26■■□□□ 1.79
NDEL1-207ENST00000580012 RGS19P49795 217 aa26.26■■□□□ 1.79
NDEL1-207ENST00000580012 CPLX2Q6PUV4 134 aaKnown RBP26.26■■□□□ 1.79
NDEL1-207ENST00000580012 MCF2L2Q86YR7 1114 aa26.26■■□□□ 1.79
NDEL1-207ENST00000580012 SH2B1Q9NRF2 756 aaPredicted RBP26.26■■□□□ 1.79
NDEL1-207ENST00000580012 SLC5A4Q9NY91 659 aa26.26■■□□□ 1.79
NDEL1-207ENST00000580012 MLLT1Q03111 559 aaPredicted RBP26.25■■□□□ 1.79
NDEL1-207ENST00000580012 NSMFQ6X4W1 530 aa26.25■■□□□ 1.79
NDEL1-207ENST00000580012 RNF207Q6ZRF8 634 aa26.25■■□□□ 1.79
NDEL1-207ENST00000580012 TRMT44Q8IYL2 757 aaKnown RBP26.25■■□□□ 1.79
NDEL1-207ENST00000580012 FGD4Q96M96 766 aa26.25■■□□□ 1.79
NDEL1-207ENST00000580012 MAP3K20Q9NYL2 800 aaKnown RBP26.25■■□□□ 1.79
NDEL1-207ENST00000580012 DOCK3Q8IZD9 2030 aa26.25■■□□□ 1.79
NDEL1-207ENST00000580012 hCG_1984214I3L0E3 225 aa26.24■■□□□ 1.79
NDEL1-207ENST00000580012 RPS6P62753 249 aaKnown RBP26.24■■□□□ 1.79
NDEL1-207ENST00000580012 SSRP1Q08945 709 aaKnown RBP26.24■■□□□ 1.79
NDEL1-207ENST00000580012 OLFML2BQ68BL8 750 aa26.24■■□□□ 1.79
NDEL1-207ENST00000580012 WWC2Q6AWC2 1192 aa26.24■■□□□ 1.79
NDEL1-207ENST00000580012 ZNF467Q7Z7K2 595 aaPredicted RBP26.24■■□□□ 1.79
NDEL1-207ENST00000580012 ZNF713Q8N859 430 aaPredicted RBP26.24■■□□□ 1.79
NDEL1-207ENST00000580012 SLAIN1Q8ND83 568 aa26.24■■□□□ 1.79
NDEL1-207ENST00000580012 MAML3Q96JK9 1138 aa26.24■■□□□ 1.79
NDEL1-207ENST00000580012 SLC26A6Q9BXS9 759 aa26.24■■□□□ 1.79
NDEL1-207ENST00000580012 BARHL2Q9NY43 387 aa26.24■■□□□ 1.79
NDEL1-207ENST00000580012 FLRT1Q9NZU1 646 aa26.24■■□□□ 1.79
NDEL1-207ENST00000580012 SOWAHBA6NEL2 793 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms