RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.58□□□□□ -1.2
CCDC178-209ENST00000579947 TRMT13Q9NUP7 481 aaKnown RBP7.58□□□□□ -1.2
CCDC178-209ENST00000579947 NCDNQ9UBB6 729 aa7.58□□□□□ -1.2
CCDC178-209ENST00000579947 FOCADQ5VW36 1801 aa7.58□□□□□ -1.2
CCDC178-209ENST00000579947 BRD1O95696 1058 aa7.58□□□□□ -1.2
CCDC178-209ENST00000579947 IFIT1P09914 478 aaKnown RBP7.58□□□□□ -1.2
CCDC178-209ENST00000579947 BFSP2Q13515 415 aa7.58□□□□□ -1.2
CCDC178-209ENST00000579947 ZYXQ15942 572 aaKnown RBP7.58□□□□□ -1.2
CCDC178-209ENST00000579947 CCDC144BQ3MJ40 725 aa7.58□□□□□ -1.2
CCDC178-209ENST00000579947 FBXO11Q86XK2 927 aa7.58□□□□□ -1.2
CCDC178-209ENST00000579947 EFHBQ8N7U6 833 aa7.58□□□□□ -1.2
CCDC178-209ENST00000579947 DHX36Q9H2U1 1008 aaKnown RBP7.58□□□□□ -1.2
CCDC178-209ENST00000579947 LAS1LQ9Y4W2 734 aaKnown RBP7.58□□□□□ -1.2
CCDC178-209ENST00000579947 ASTN1O14525 1302 aa7.58□□□□□ -1.2
CCDC178-209ENST00000579947 CXCL10P02778 98 aa7.57□□□□□ -1.2
CCDC178-209ENST00000579947 TMPOP42166 694 aaKnown RBP7.57□□□□□ -1.2
CCDC178-209ENST00000579947 PSMC6P62333 389 aa7.57□□□□□ -1.2
CCDC178-209ENST00000579947 VARS2Q5ST30 1063 aaKnown RBP7.57□□□□□ -1.2
CCDC178-209ENST00000579947 CCDC30Q5VVM6 783 aa7.57□□□□□ -1.2
CCDC178-209ENST00000579947 UNQ6494/PRO21346Q6UXR6 183 aa7.57□□□□□ -1.2
CCDC178-209ENST00000579947 NETO1Q8TDF5 533 aa7.57□□□□□ -1.2
CCDC178-209ENST00000579947 C5orf67F2Z3F1 127 aa7.57□□□□□ -1.2
CCDC178-209ENST00000579947 NPR3P17342 541 aa7.57□□□□□ -1.2
CCDC178-209ENST00000579947 GTF2F1P35269 517 aaKnown RBP eCLIP7.57□□□□□ -1.2
CCDC178-209ENST00000579947 COPB2P35606 906 aa7.57□□□□□ -1.2
CCDC178-209ENST00000579947 FOXP4Q8IVH2 680 aaPredicted RBP7.57□□□□□ -1.2
CCDC178-209ENST00000579947 LINS1Q8NG48 757 aa7.57□□□□□ -1.2
CCDC178-209ENST00000579947 ABHD16BQ9H3Z7 469 aa7.57□□□□□ -1.2
CCDC178-209ENST00000579947 TET1Q8NFU7 2136 aa7.56□□□□□ -1.2
CCDC178-209ENST00000579947 SRRM3A6NNA2 597 aaPredicted RBP7.56□□□□□ -1.2
CCDC178-209ENST00000579947 SEMA3EO15041 775 aa7.56□□□□□ -1.2
CCDC178-209ENST00000579947 PI15O43692 258 aa7.56□□□□□ -1.2
CCDC178-209ENST00000579947 PARNO95453 639 aaKnown RBP7.56□□□□□ -1.2
CCDC178-209ENST00000579947 FSCN1Q16658 493 aaKnown RBP7.56□□□□□ -1.2
CCDC178-209ENST00000579947 METTL24Q5JXM2 366 aa7.56□□□□□ -1.2
CCDC178-209ENST00000579947 RIOX2Q8IUF8 465 aa7.56□□□□□ -1.2
CCDC178-209ENST00000579947 SECISBP2LQ93073 1101 aaKnown RBP7.56□□□□□ -1.2
CCDC178-209ENST00000579947 IGFLR1Q9H665 355 aa7.56□□□□□ -1.2
CCDC178-209ENST00000579947 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.56□□□□□ -1.2
CCDC178-209ENST00000579947 RB1P06400 928 aa7.56□□□□□ -1.2
CCDC178-209ENST00000579947 PLS1Q14651 629 aa7.56□□□□□ -1.2
CCDC178-209ENST00000579947 GPNMBQ14956 572 aa7.56□□□□□ -1.2
CCDC178-209ENST00000579947 PUM3Q15397 648 aaKnown RBP7.56□□□□□ -1.2
CCDC178-209ENST00000579947 TCTN1Q2MV58 587 aa7.56□□□□□ -1.2
CCDC178-209ENST00000579947 OTOGLQ3ZCN5 2332 aa7.56□□□□□ -1.2
CCDC178-209ENST00000579947 HNRNPABQ99729 332 aaKnown RBP7.56□□□□□ -1.2
CCDC178-209ENST00000579947 CACNA2D2Q9NY47 1150 aa7.56□□□□□ -1.2
CCDC178-209ENST00000579947 SP9P0CG40 484 aa7.55□□□□□ -1.2
CCDC178-209ENST00000579947 DZIP1Q86YF9 867 aaKnown RBP7.55□□□□□ -1.2
CCDC178-209ENST00000579947 AFAP1L1Q8TED9 768 aa7.55□□□□□ -1.2
CCDC178-209ENST00000579947 DDX1Q92499 740 aaKnown RBP7.55□□□□□ -1.2
CCDC178-209ENST00000579947 KATNBL1Q9H079 304 aa7.55□□□□□ -1.2
CCDC178-209ENST00000579947 DENND2AQ9ULE3 1009 aa7.55□□□□□ -1.2
CCDC178-209ENST00000579947 GNEQ9Y223 722 aaKnown RBP7.55□□□□□ -1.2
CCDC178-209ENST00000579947 C1QTNF9BB2RNN3 333 aa7.55□□□□□ -1.2
CCDC178-209ENST00000579947 C1QTNF9P0C862 333 aa7.55□□□□□ -1.2
CCDC178-209ENST00000579947 TGM1P22735 817 aa7.55□□□□□ -1.2
CCDC178-209ENST00000579947 N4BP2L1Q5TBK1 243 aaPredicted RBP7.55□□□□□ -1.2
CCDC178-209ENST00000579947 CCDC155Q8N6L0 562 aa7.55□□□□□ -1.2
CCDC178-209ENST00000579947 FLNBO75369 2602 aaKnown RBP7.55□□□□□ -1.2
CCDC178-209ENST00000579947 MICAL3Q7RTP6 2002 aa7.55□□□□□ -1.2
CCDC178-209ENST00000579947 DNAJC25-GNG10A0A024R161 153 aa7.55□□□□□ -1.2
CCDC178-209ENST00000579947 KINO60870 393 aaKnown RBP7.55□□□□□ -1.2
CCDC178-209ENST00000579947 MMP1P03956 469 aa7.55□□□□□ -1.2
CCDC178-209ENST00000579947 PTPN11Q06124 597 aaPredicted RBP7.55□□□□□ -1.2
CCDC178-209ENST00000579947 FLCNQ8NFG4 579 aa7.55□□□□□ -1.2
CCDC178-209ENST00000579947 TANGO6Q9C0B7 1094 aa7.55□□□□□ -1.2
CCDC178-209ENST00000579947 Q9Y3F1 56 aa7.55□□□□□ -1.2
CCDC178-209ENST00000579947 NR2E1Q9Y466 385 aa7.55□□□□□ -1.2
CCDC178-209ENST00000579947 EP300Q09472 2414 aaPredicted RBP7.54□□□□□ -1.2
CCDC178-209ENST00000579947 PDS5AQ29RF7 1337 aaKnown RBP7.54□□□□□ -1.2
CCDC178-209ENST00000579947 SPTLC1O15269 473 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 GH2P01242 217 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 SMPD1P17405 629 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 MCAMP43121 646 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 IKBKEQ14164 716 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 FAM117BQ6P1L5 589 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 TLK2Q86UE8 772 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 ADAM32Q8TC27 787 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 PPP2R3CQ969Q6 453 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 C11orf84Q9BUA3 381 aaPredicted RBP7.54□□□□□ -1.2
CCDC178-209ENST00000579947 AP5M1Q9H0R1 490 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 GRM6O15303 877 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 AMHP03971 560 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 TNFAIP2Q03169 654 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 TMEM132BQ14DG7 1078 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 CAGE1Q8TC20 777 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 ACER1Q8TDN7 264 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 TRIM34Q9BYJ4 488 aa7.54□□□□□ -1.2
CCDC178-209ENST00000579947 ARP10275 920 aa7.53□□□□□ -1.2
CCDC178-209ENST00000579947 RBL2Q08999 1139 aa7.53□□□□□ -1.2
CCDC178-209ENST00000579947 LRRC24Q50LG9 513 aa7.53□□□□□ -1.2
CCDC178-209ENST00000579947 SPTY2D1Q68D10 685 aaPredicted RBP7.53□□□□□ -1.2
CCDC178-209ENST00000579947 TMEM121BQ9BXQ6 578 aaPredicted RBP7.53□□□□□ -1.2
CCDC178-209ENST00000579947 GNL3LQ9NVN8 582 aaKnown RBP7.53□□□□□ -1.2
CCDC178-209ENST00000579947 RWDD3Q9Y3V2 267 aa7.53□□□□□ -1.2
CCDC178-209ENST00000579947 GLP2RO95838 553 aa7.53□□□□□ -1.2
CCDC178-209ENST00000579947 CNGB1Q14028 1251 aaPredicted RBP7.53□□□□□ -1.2
CCDC178-209ENST00000579947 LPIN2Q92539 896 aa7.53□□□□□ -1.2
CCDC178-209ENST00000579947 ATG4CQ96DT6 458 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms