RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 AP5M1Q9H0R1 490 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 HIPK3Q9H422 1215 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 PRDM12Q9H4Q4 367 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 RNF146Q9NTX7 359 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 MSRAQ9UJ68 235 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 RCAN3Q9UKA8 241 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 ISY1Q9ULR0 285 aaKnown RBP10.17□□□□□ -0.78
CASC3-206ENST00000579238 TTC28Q96AY4 2481 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 MUC3AQ02505 3323 aa10.17□□□□□ -0.78
CASC3-206ENST00000579238 ZNF536O15090 1300 aa10.16□□□□□ -0.78
CASC3-206ENST00000579238 DYNC1LI2O43237 492 aaPredicted RBP10.16□□□□□ -0.78
CASC3-206ENST00000579238 FGBP02675 491 aa10.16□□□□□ -0.78
CASC3-206ENST00000579238 SLC1A4P43007 532 aa10.16□□□□□ -0.78
CASC3-206ENST00000579238 IKQ13123 557 aaPredicted RBP10.16□□□□□ -0.78
CASC3-206ENST00000579238 ITGA7Q13683 1181 aa10.16□□□□□ -0.78
CASC3-206ENST00000579238 IQSEC1Q6DN90 963 aa10.16□□□□□ -0.78
CASC3-206ENST00000579238 PPM1EQ8WY54 764 aa10.16□□□□□ -0.78
CASC3-206ENST00000579238 TRERF1Q96PN7 1200 aa10.16□□□□□ -0.78
CASC3-206ENST00000579238 NAPBQ9H115 298 aa10.16□□□□□ -0.78
CASC3-206ENST00000579238 DCTPP1Q9H773 170 aa10.16□□□□□ -0.78
CASC3-206ENST00000579238 CXXC1Q9P0U4 656 aaPredicted RBP10.16□□□□□ -0.78
CASC3-206ENST00000579238 THEGQ9P2T0 379 aa10.16□□□□□ -0.78
CASC3-206ENST00000579238 Q9Y3F1 56 aa10.16□□□□□ -0.78
CASC3-206ENST00000579238 MYO9BQ13459 2157 aa10.16□□□□□ -0.78
CASC3-206ENST00000579238 GRIN2DO15399 1336 aa10.15□□□□□ -0.78
CASC3-206ENST00000579238 ALAS1P13196 640 aa10.15□□□□□ -0.78
CASC3-206ENST00000579238 SMPD1P17405 629 aa10.15□□□□□ -0.78
CASC3-206ENST00000579238 MCCP23508 829 aa10.15□□□□□ -0.78
CASC3-206ENST00000579238 PPARAQ07869 468 aa10.15□□□□□ -0.78
CASC3-206ENST00000579238 ADGRE1Q14246 886 aa10.15□□□□□ -0.78
CASC3-206ENST00000579238 C20orf194Q5TEA3 1177 aa10.15□□□□□ -0.78
CASC3-206ENST00000579238 RCSD1Q6JBY9 416 aa10.15□□□□□ -0.78
CASC3-206ENST00000579238 TAPT1Q6NXT6 567 aa10.15□□□□□ -0.78
CASC3-206ENST00000579238 ASB2Q96Q27 587 aa10.15□□□□□ -0.78
CASC3-206ENST00000579238 NOC4LQ9BVI4 516 aaKnown RBP10.15□□□□□ -0.78
CASC3-206ENST00000579238 NKX2-4Q9H2Z4 354 aa10.15□□□□□ -0.78
CASC3-206ENST00000579238 CYP39A1Q9NYL5 469 aa10.15□□□□□ -0.78
CASC3-206ENST00000579238 UMODL1Q5DID0 1318 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 TTC41PQ6P2S7 1318 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 ERC2O15083 957 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 B4GALT4O60513 344 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 IGFBP4P22692 258 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 CCL23P55773 120 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 MRPS5P82675 430 aaKnown RBP10.14□□□□□ -0.79
CASC3-206ENST00000579238 MUM1L1Q5H9M0 696 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 KCTD1Q719H9 257 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 OTOP2Q7RTS6 562 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 FBXO16Q8IX29 292 aaPredicted RBP10.14□□□□□ -0.79
CASC3-206ENST00000579238 RPUSD2Q8IZ73 545 aaKnown RBP10.14□□□□□ -0.79
CASC3-206ENST00000579238 MORC4Q8TE76 937 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 SEC62Q99442 399 aaKnown RBP10.14□□□□□ -0.79
CASC3-206ENST00000579238 TRPV6Q9H1D0 765 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 WNT8AQ9H1J5 351 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 SLC28A3Q9HAS3 691 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 VTA1Q9NP79 307 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 PDGFCQ9NRA1 345 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 PRR12Q9ULL5 1215 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 STX8Q9UNK0 236 aa10.14□□□□□ -0.79
CASC3-206ENST00000579238 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.14□□□□□ -0.79
CASC3-206ENST00000579238 YBX2Q9Y2T7 364 aaKnown RBP10.14□□□□□ -0.79
CASC3-206ENST00000579238 TSPY2A6NKD2 308 aa10.13□□□□□ -0.79
CASC3-206ENST00000579238 PTGS1P23219 599 aa10.13□□□□□ -0.79
CASC3-206ENST00000579238 SNAP25P60880 206 aa10.13□□□□□ -0.79
CASC3-206ENST00000579238 PSMC6P62333 389 aa10.13□□□□□ -0.79
CASC3-206ENST00000579238 CCDC85BQ15834 202 aaPredicted RBP10.13□□□□□ -0.79
CASC3-206ENST00000579238 ZMYM1Q5SVZ6 1142 aa10.13□□□□□ -0.79
CASC3-206ENST00000579238 DIEXFQ68CQ4 756 aaKnown RBP10.13□□□□□ -0.79
CASC3-206ENST00000579238 NSMFQ6X4W1 530 aa10.13□□□□□ -0.79
CASC3-206ENST00000579238 KIAA1211Q6ZU35 1233 aa10.13□□□□□ -0.79
CASC3-206ENST00000579238 EEPD1Q7L9B9 569 aa10.13□□□□□ -0.79
CASC3-206ENST00000579238 PI4K2BQ8TCG2 481 aa10.13□□□□□ -0.79
CASC3-206ENST00000579238 CHMP4CQ96CF2 233 aa10.13□□□□□ -0.79
CASC3-206ENST00000579238 FSD1Q9BTV5 496 aa10.13□□□□□ -0.79
CASC3-206ENST00000579238 IL17RBQ9NRM6 502 aa10.13□□□□□ -0.79
CASC3-206ENST00000579238 CCPG1Q9ULG6 757 aa10.13□□□□□ -0.79
CASC3-206ENST00000579238 SLC4A7Q9Y6M7 1214 aa10.13□□□□□ -0.79
CASC3-206ENST00000579238 DDX49Q9Y6V7 483 aaKnown RBP10.13□□□□□ -0.79
CASC3-206ENST00000579238 LOC102724159A0A0B4J2E5 919 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 ICAM1P05362 532 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 PFKMP08237 780 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 SUPT20HL2P0C7V6 817 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 COL9A1P20849 921 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 NOVP48745 357 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 RABGGTBP53611 331 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 PWP2Q15269 919 aaKnown RBP10.12□□□□□ -0.79
CASC3-206ENST00000579238 DUSP28Q4G0W2 176 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 TMEM63BQ5T3F8 832 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 PPP2R2DQ66LE6 453 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 IL27Q8NEV9 243 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 ADAMTS19Q8TE59 1207 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 DCAF4Q8WV16 495 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 VWCEQ96DN2 955 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 ALDH8A1Q9H2A2 487 aaPredicted RBP10.12□□□□□ -0.79
CASC3-206ENST00000579238 TSPYL2Q9H2G4 693 aaPredicted RBP10.12□□□□□ -0.79
CASC3-206ENST00000579238 RANBP17Q9H2T7 1088 aaKnown RBP10.12□□□□□ -0.79
CASC3-206ENST00000579238 POLR3EQ9NVU0 708 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 ADD3Q9UEY8 706 aaKnown RBP10.12□□□□□ -0.79
CASC3-206ENST00000579238 PCDHA11Q9Y5I1 949 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 LRRC37A2A6NM11 1700 aa10.12□□□□□ -0.79
CASC3-206ENST00000579238 ZBBXA8MT70 800 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms