RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 FGRP09769 529 aa10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 ITGB8P26012 769 aa10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 TNFAIP2Q03169 654 aa10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 GNASQ5JWF2 1037 aa10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 TBC1D10CQ8IV04 446 aa10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 PCSK9Q8NBP7 692 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 KLHDC9Q8NEP7 349 aa10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 PURBQ96QR8 312 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 RANBP17Q9H2T7 1088 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 RNF41Q9H4P4 317 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 MTMR10Q9NXD2 777 aa10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 CYP39A1Q9NYL5 469 aa10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 NEDD4P46934 1319 aa10.84□□□□□ -0.67
CDK5RAP3-211ENST00000578996 PDHBP11177 359 aa10.83□□□□□ -0.68
CDK5RAP3-211ENST00000578996 CST5P28325 142 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-211ENST00000578996 NOVP48745 357 aa10.83□□□□□ -0.68
CDK5RAP3-211ENST00000578996 GJA9P57773 515 aa10.83□□□□□ -0.68
CDK5RAP3-211ENST00000578996 BEX3Q00994 111 aa10.83□□□□□ -0.68
CDK5RAP3-211ENST00000578996 FAAP100Q0VG06 881 aa10.83□□□□□ -0.68
CDK5RAP3-211ENST00000578996 ZNF697Q5TEC3 545 aa10.83□□□□□ -0.68
CDK5RAP3-211ENST00000578996 TLK2Q86UE8 772 aa10.83□□□□□ -0.68
CDK5RAP3-211ENST00000578996 TICAM2Q86XR7 235 aa10.83□□□□□ -0.68
CDK5RAP3-211ENST00000578996 FBXO16Q8IX29 292 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-211ENST00000578996 ESR2Q92731 530 aa10.83□□□□□ -0.68
CDK5RAP3-211ENST00000578996 KATNBL1Q9H079 304 aa10.83□□□□□ -0.68
CDK5RAP3-211ENST00000578996 TCP11L1Q9NUJ3 509 aa10.83□□□□□ -0.68
CDK5RAP3-211ENST00000578996 ASTN1O14525 1302 aa10.83□□□□□ -0.68
CDK5RAP3-211ENST00000578996 MROH7Q68CQ1 1323 aa10.83□□□□□ -0.68
CDK5RAP3-211ENST00000578996 SMCHD1A6NHR9 2005 aa10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 A0A0U1RQG5 324 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 HIP1O00291 1037 aa10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 NFIBO00712 420 aa10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 GOLGA8HP0CJ92 632 aa10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 PCP11498 1178 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 PTGS1P23219 599 aa10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 CALML3P27482 149 aa10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 FPGSQ05932 587 aa10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 BAATQ14032 418 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 CCSAPQ6IQ19 270 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 ANKRD33Q7Z3H0 272 aa10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 RNPC3Q96LT9 517 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 AP5M1Q9H0R1 490 aa10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 UPF3AQ9H1J1 476 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 OSBPL3Q9H4L5 887 aa10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 PDGFCQ9NRA1 345 aa10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 ELP1O95163 1332 aa10.82□□□□□ -0.68
CDK5RAP3-211ENST00000578996 KIAA0355O15063 1070 aa10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 TLR3O15455 904 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 DYNC1LI2O43237 492 aaPredicted RBP10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 KDM4AO75164 1064 aa10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 SMPD1P17405 629 aa10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 ALDH5A1P51649 535 aaPredicted RBP10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 ZNF543Q08ER8 600 aa10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 IMMTQ16891 758 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 USH1GQ495M9 461 aa10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 CXCL17Q6UXB2 119 aa10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 BTNL9Q6UXG8 535 aa10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 SLC30A10Q6XR72 485 aa10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 KIAA1211Q6ZU35 1233 aa10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 IQCA1Q86XH1 822 aa10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 TTC14Q96N46 770 aa10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 TOX2Q96NM4 488 aa10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 PPP1R12CQ9BZL4 782 aa10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 KAT14Q9H8E8 782 aa10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 ADD3Q9UEY8 706 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 STXBP5LQ9Y2K9 1186 aa10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 SUPT16HQ9Y5B9 1047 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-211ENST00000578996 B4E1Z4 1266 aa10.8□□□□□ -0.68
CDK5RAP3-211ENST00000578996 ARVCFO00192 962 aa10.8□□□□□ -0.68
CDK5RAP3-211ENST00000578996 DHX16O60231 1041 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-211ENST00000578996 ZEB2O60315 1214 aa10.8□□□□□ -0.68
CDK5RAP3-211ENST00000578996 TIMP1P01033 207 aa10.8□□□□□ -0.68
CDK5RAP3-211ENST00000578996 EPHB4P54760 987 aa10.8□□□□□ -0.68
CDK5RAP3-211ENST00000578996 IRX6P78412 446 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-211ENST00000578996 FSCN1Q16658 493 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-211ENST00000578996 TMEM63BQ5T3F8 832 aa10.8□□□□□ -0.68
CDK5RAP3-211ENST00000578996 RNF207Q6ZRF8 634 aa10.8□□□□□ -0.68
CDK5RAP3-211ENST00000578996 PNMA1Q8ND90 353 aa10.8□□□□□ -0.68
CDK5RAP3-211ENST00000578996 UBA5Q9GZZ9 404 aa10.8□□□□□ -0.68
CDK5RAP3-211ENST00000578996 CPVLQ9H3G5 476 aa10.8□□□□□ -0.68
CDK5RAP3-211ENST00000578996 VTA1Q9NP79 307 aa10.8□□□□□ -0.68
CDK5RAP3-211ENST00000578996 GNEQ9Y223 722 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-211ENST00000578996 MCM3APO60318 1980 aa10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 LRRC37A2A6NM11 1700 aa10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 CTAGE5O15320 804 aa10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 CDK7P50613 346 aa10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 PSMC6P62333 389 aa10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 SMAD3P84022 425 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 PDE4DQ08499 809 aa10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 GPATCH4Q5T3I0 446 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 IQSEC1Q6DN90 963 aa10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 FAM109BQ6ICB4 259 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 TAPT1Q6NXT6 567 aa10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 DGKHQ86XP1 1220 aa10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 FAM126BQ8IXS8 530 aa10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 GUCD1Q96NT3 240 aa10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 ZSCAN10Q96SZ4 725 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 MPHOSPH6Q99547 160 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 DSCC1Q9BVC3 393 aa10.79□□□□□ -0.68
CDK5RAP3-211ENST00000578996 TBX21Q9UL17 535 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms