RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 ARPP21Q9UBL0 812 aaPredicted RBP10.91□□□□□ -0.66
PTPRM-210ENST00000578916 CLIP2Q9UDT6 1046 aa10.91□□□□□ -0.66
PTPRM-210ENST00000578916 GNEQ9Y223 722 aaKnown RBP10.91□□□□□ -0.66
PTPRM-210ENST00000578916 GPR37L1O60883 481 aa10.9□□□□□ -0.66
PTPRM-210ENST00000578916 SUPT20HL2P0C7V6 817 aa10.9□□□□□ -0.66
PTPRM-210ENST00000578916 SMPD1P17405 629 aa10.9□□□□□ -0.66
PTPRM-210ENST00000578916 RASA1P20936 1047 aa10.9□□□□□ -0.66
PTPRM-210ENST00000578916 PSMC6P62333 389 aa10.9□□□□□ -0.66
PTPRM-210ENST00000578916 UBE3CQ15386 1083 aa10.9□□□□□ -0.66
PTPRM-210ENST00000578916 DEFB128Q7Z7B8 93 aa10.9□□□□□ -0.66
PTPRM-210ENST00000578916 FAM133AQ8N9E0 248 aa10.9□□□□□ -0.66
PTPRM-210ENST00000578916 ARNTL2Q8WYA1 636 aa10.9□□□□□ -0.66
PTPRM-210ENST00000578916 KIF1BPQ96EK5 621 aa10.9□□□□□ -0.66
PTPRM-210ENST00000578916 AGBL1Q96MI9 1066 aa10.9□□□□□ -0.66
PTPRM-210ENST00000578916 ALDH8A1Q9H2A2 487 aaPredicted RBP10.9□□□□□ -0.66
PTPRM-210ENST00000578916 BOLA2Q9H3K6 86 aa10.9□□□□□ -0.66
PTPRM-210ENST00000578916 ACAD9Q9H845 621 aa10.9□□□□□ -0.66
PTPRM-210ENST00000578916 ISY1Q9ULR0 285 aaKnown RBP10.9□□□□□ -0.66
PTPRM-210ENST00000578916 REV3LO60673 3130 aa10.9□□□□□ -0.66
PTPRM-210ENST00000578916 MYO9BQ13459 2157 aa10.9□□□□□ -0.66
PTPRM-210ENST00000578916 TCF20Q9UGU0 1960 aaKnown RBP10.9□□□□□ -0.66
PTPRM-210ENST00000578916 NCOR1O75376 2440 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 ZBED9Q6R2W3 1325 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 SOWAHBA6NEL2 793 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 FAM86C2PA6NEL3 165 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 MINDY4BA8MYZ0 360 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 KIF28PB7ZC32 967 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 CHGBP05060 677 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 FDX1P10109 184 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 CYP2C9P11712 490 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 RLBP1P12271 317 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 SBK1Q52WX2 424 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 KRT40Q6A162 431 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 IQSEC1Q6DN90 963 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 ZSCAN25Q6NSZ9 544 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 ZNF444Q8N0Y2 327 aaPredicted RBP10.89□□□□□ -0.67
PTPRM-210ENST00000578916 PHOSPHO2Q8TCD6 241 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 VWCEQ96DN2 955 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 SLC9A7Q96T83 725 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 PDGFCQ9NRA1 345 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 RNF146Q9NTX7 359 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 COG6Q9Y2V7 657 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 Q9Y3F1 56 aa10.89□□□□□ -0.67
PTPRM-210ENST00000578916 MYH8P13535 1937 aa10.88□□□□□ -0.67
PTPRM-210ENST00000578916 EPOPA6NHQ4 379 aa10.88□□□□□ -0.67
PTPRM-210ENST00000578916 BMP3P12645 472 aa10.88□□□□□ -0.67
PTPRM-210ENST00000578916 ATP5JP18859 108 aa10.88□□□□□ -0.67
PTPRM-210ENST00000578916 PTGS1P23219 599 aa10.88□□□□□ -0.67
PTPRM-210ENST00000578916 RFC2P35250 354 aa10.88□□□□□ -0.67
PTPRM-210ENST00000578916 TAP1Q03518 808 aa10.88□□□□□ -0.67
PTPRM-210ENST00000578916 TKFCQ3LXA3 575 aa10.88□□□□□ -0.67
PTPRM-210ENST00000578916 SLFN13Q68D06 897 aa10.88□□□□□ -0.67
PTPRM-210ENST00000578916 EEPD1Q7L9B9 569 aa10.88□□□□□ -0.67
PTPRM-210ENST00000578916 MKL1Q969V6 931 aa10.88□□□□□ -0.67
PTPRM-210ENST00000578916 FTOQ9C0B1 505 aaKnown RBP eCLIP10.88□□□□□ -0.67
PTPRM-210ENST00000578916 PUS7LQ9H0K6 701 aaKnown RBP10.88□□□□□ -0.67
PTPRM-210ENST00000578916 A1CFQ9NQ94 594 aaKnown RBP10.88□□□□□ -0.67
PTPRM-210ENST00000578916 TRMT13Q9NUP7 481 aaKnown RBP10.88□□□□□ -0.67
PTPRM-210ENST00000578916 TNKSO95271 1327 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 IGKV6D-41A0A0C4DH26 115 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 TMEM232C9JQI7 657 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 TTLL1O95922 423 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 ALAS1P13196 640 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 IKQ13123 557 aaPredicted RBP10.87□□□□□ -0.67
PTPRM-210ENST00000578916 GRB10Q13322 594 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 TAPT1Q6NXT6 567 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 KIAA1211Q6ZU35 1233 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 ALYREFQ86V81 257 aaKnown RBP10.87□□□□□ -0.67
PTPRM-210ENST00000578916 FBXO16Q8IX29 292 aaPredicted RBP10.87□□□□□ -0.67
PTPRM-210ENST00000578916 RPAP2Q8IXW5 612 aaPredicted RBP10.87□□□□□ -0.67
PTPRM-210ENST00000578916 LRRC47Q8N1G4 583 aaKnown RBP10.87□□□□□ -0.67
PTPRM-210ENST00000578916 RETREG2Q8NC44 543 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 GMCL1P1Q8NEA9 526 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 CHURC1Q8WUH1 139 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 KHSRPQ92945 711 aaKnown RBP eCLIP10.87□□□□□ -0.67
PTPRM-210ENST00000578916 TRERF1Q96PN7 1200 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 HAUS7Q99871 368 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 ZNF287Q9HBT7 754 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 VTA1Q9NP79 307 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 C11orf16Q9NQ32 467 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 POLR3EQ9NVU0 708 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 MTMR4Q9NYA4 1195 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 SYNPO2Q9UMS6 1093 aa10.87□□□□□ -0.67
PTPRM-210ENST00000578916 DDX49Q9Y6V7 483 aaKnown RBP10.87□□□□□ -0.67
PTPRM-210ENST00000578916 PI4K2BG5E9Z4 385 aa10.86□□□□□ -0.67
PTPRM-210ENST00000578916 RAB11FIP3O75154 756 aa10.86□□□□□ -0.67
PTPRM-210ENST00000578916 HMMRO75330 724 aa10.86□□□□□ -0.67
PTPRM-210ENST00000578916 MYL3P08590 195 aa10.86□□□□□ -0.67
PTPRM-210ENST00000578916 STAT2P52630 851 aa10.86□□□□□ -0.67
PTPRM-210ENST00000578916 FAM47CQ5HY64 1035 aa10.86□□□□□ -0.67
PTPRM-210ENST00000578916 TMEM63BQ5T3F8 832 aa10.86□□□□□ -0.67
PTPRM-210ENST00000578916 GIMAP6Q6P9H5 292 aa10.86□□□□□ -0.67
PTPRM-210ENST00000578916 FAM160B2Q86V87 743 aa10.86□□□□□ -0.67
PTPRM-210ENST00000578916 HERC6Q8IVU3 1022 aa10.86□□□□□ -0.67
PTPRM-210ENST00000578916 CEP95Q96GE4 821 aa10.86□□□□□ -0.67
PTPRM-210ENST00000578916 STRBPQ96SI9 672 aaKnown RBP10.86□□□□□ -0.67
PTPRM-210ENST00000578916 GPHNQ9NQX3 736 aaPredicted RBP10.86□□□□□ -0.67
PTPRM-210ENST00000578916 GBF1Q92538 1859 aa10.86□□□□□ -0.67
PTPRM-210ENST00000578916 BAZ2AQ9UIF9 1905 aaKnown RBP10.86□□□□□ -0.67
PTPRM-210ENST00000578916 ZNF536O15090 1300 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms