RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 KDM4AO75164 1064 aa18.66■□□□□ 0.58
CRLF3-203ENST00000578692 C6orf222P0C671 652 aaPredicted RBP18.66■□□□□ 0.58
CRLF3-203ENST00000578692 SNHG28P0DPA3 235 aa18.66■□□□□ 0.58
CRLF3-203ENST00000578692 GJA9P57773 515 aa18.66■□□□□ 0.58
CRLF3-203ENST00000578692 ZNF543Q08ER8 600 aa18.66■□□□□ 0.58
CRLF3-203ENST00000578692 IMMTQ16891 758 aaKnown RBP18.66■□□□□ 0.58
CRLF3-203ENST00000578692 GPR153Q6NV75 609 aa18.66■□□□□ 0.58
CRLF3-203ENST00000578692 SH3RF1Q7Z6J0 888 aa18.66■□□□□ 0.58
CRLF3-203ENST00000578692 IQCA1Q86XH1 822 aa18.66■□□□□ 0.58
CRLF3-203ENST00000578692 PCSK9Q8NBP7 692 aaKnown RBP18.66■□□□□ 0.58
CRLF3-203ENST00000578692 STARD7Q9NQZ5 370 aa18.66■□□□□ 0.58
CRLF3-203ENST00000578692 PDLIM7Q9NR12 457 aa18.66■□□□□ 0.58
CRLF3-203ENST00000578692 TRIM43BA6NCK2 446 aa18.65■□□□□ 0.58
CRLF3-203ENST00000578692 MYADML2A6NDP7 307 aa18.65■□□□□ 0.58
CRLF3-203ENST00000578692 CST5P28325 142 aaPredicted RBP18.65■□□□□ 0.58
CRLF3-203ENST00000578692 IRX5P78411 483 aaPredicted RBP18.65■□□□□ 0.58
CRLF3-203ENST00000578692 TTC22Q5TAA0 569 aa18.65■□□□□ 0.58
CRLF3-203ENST00000578692 BADQ92934 168 aa18.65■□□□□ 0.58
CRLF3-203ENST00000578692 TRIM43Q96BQ3 446 aaPredicted RBP18.65■□□□□ 0.58
CRLF3-203ENST00000578692 ASTN1O14525 1302 aa18.64■□□□□ 0.57
CRLF3-203ENST00000578692 B4E1Z4 1266 aa18.64■□□□□ 0.57
CRLF3-203ENST00000578692 ASGR1P07306 291 aa18.64■□□□□ 0.57
CRLF3-203ENST00000578692 CLTBP09497 229 aa18.64■□□□□ 0.57
CRLF3-203ENST00000578692 TNFAIP2Q03169 654 aa18.64■□□□□ 0.57
CRLF3-203ENST00000578692 BAATQ14032 418 aaPredicted RBP18.64■□□□□ 0.57
CRLF3-203ENST00000578692 GNASQ5JWF2 1037 aa18.64■□□□□ 0.57
CRLF3-203ENST00000578692 GPATCH4Q5T3I0 446 aaKnown RBP18.64■□□□□ 0.57
CRLF3-203ENST00000578692 GLT1D1Q96MS3 346 aa18.64■□□□□ 0.57
CRLF3-203ENST00000578692 PURBQ96QR8 312 aaKnown RBP18.64■□□□□ 0.57
CRLF3-203ENST00000578692 UPF3AQ9H1J1 476 aaKnown RBP18.64■□□□□ 0.57
CRLF3-203ENST00000578692 ZSWIM5Q9P217 1185 aa18.64■□□□□ 0.57
CRLF3-203ENST00000578692 PNMA2Q9UL42 364 aa18.64■□□□□ 0.57
CRLF3-203ENST00000578692 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.63■□□□□ 0.57
CRLF3-203ENST00000578692 PQBP1O60828 265 aaKnown RBP18.63■□□□□ 0.57
CRLF3-203ENST00000578692 GOLGA8HP0CJ92 632 aa18.63■□□□□ 0.57
CRLF3-203ENST00000578692 GSPT1P15170 499 aaKnown RBP18.63■□□□□ 0.57
CRLF3-203ENST00000578692 NOL8Q76FK4 1167 aaKnown RBP18.63■□□□□ 0.57
CRLF3-203ENST00000578692 PNMA1Q8ND90 353 aa18.63■□□□□ 0.57
CRLF3-203ENST00000578692 ANKS1AQ92625 1134 aa18.63■□□□□ 0.57
CRLF3-203ENST00000578692 VTI1AQ96AJ9 217 aa18.63■□□□□ 0.57
CRLF3-203ENST00000578692 TOX2Q96NM4 488 aa18.63■□□□□ 0.57
CRLF3-203ENST00000578692 ZSCAN10Q96SZ4 725 aaPredicted RBP18.63■□□□□ 0.57
CRLF3-203ENST00000578692 KRT23Q9C075 422 aa18.63■□□□□ 0.57
CRLF3-203ENST00000578692 KAT14Q9H8E8 782 aa18.63■□□□□ 0.57
CRLF3-203ENST00000578692 ADD3Q9UEY8 706 aaKnown RBP18.63■□□□□ 0.57
CRLF3-203ENST00000578692 DDX49Q9Y6V7 483 aaKnown RBP18.63■□□□□ 0.57
CRLF3-203ENST00000578692 LTBP2Q14767 1821 aa18.62■□□□□ 0.57
CRLF3-203ENST00000578692 ELP1O95163 1332 aa18.62■□□□□ 0.57
CRLF3-203ENST00000578692 PTPDC1A2A3K4 754 aa18.62■□□□□ 0.57
CRLF3-203ENST00000578692 DCDC2CA8MYV0 355 aa18.62■□□□□ 0.57
CRLF3-203ENST00000578692 NFIBO00712 420 aa18.62■□□□□ 0.57
CRLF3-203ENST00000578692 NKX3-2P78367 333 aa18.62■□□□□ 0.57
CRLF3-203ENST00000578692 IQSEC1Q6DN90 963 aa18.62■□□□□ 0.57
CRLF3-203ENST00000578692 EEPD1Q7L9B9 569 aa18.62■□□□□ 0.57
CRLF3-203ENST00000578692 ANKRD33Q7Z3H0 272 aa18.62■□□□□ 0.57
CRLF3-203ENST00000578692 IL25Q9H293 177 aa18.62■□□□□ 0.57
CRLF3-203ENST00000578692 GNEQ9Y223 722 aaKnown RBP18.62■□□□□ 0.57
CRLF3-203ENST00000578692 LAMA4Q16363 1823 aa18.62■□□□□ 0.57
CRLF3-203ENST00000578692 FAAP100Q0VG06 881 aa18.61■□□□□ 0.57
CRLF3-203ENST00000578692 TAPT1Q6NXT6 567 aa18.61■□□□□ 0.57
CRLF3-203ENST00000578692 MORC4Q8TE76 937 aa18.61■□□□□ 0.57
CRLF3-203ENST00000578692 CLEC4DQ8WXI8 215 aa18.61■□□□□ 0.57
CRLF3-203ENST00000578692 UBA5Q9GZZ9 404 aa18.61■□□□□ 0.57
CRLF3-203ENST00000578692 CNNM2Q9H8M5 875 aa18.61■□□□□ 0.57
CRLF3-203ENST00000578692 PDGFCQ9NRA1 345 aa18.61■□□□□ 0.57
CRLF3-203ENST00000578692 TMEM39AQ9NV64 488 aa18.61■□□□□ 0.57
CRLF3-203ENST00000578692 KIAA0355O15063 1070 aa18.6■□□□□ 0.57
CRLF3-203ENST00000578692 CTAGE5O15320 804 aa18.6■□□□□ 0.57
CRLF3-203ENST00000578692 RAG1P15918 1043 aa18.6■□□□□ 0.57
CRLF3-203ENST00000578692 ITGB8P26012 769 aa18.6■□□□□ 0.57
CRLF3-203ENST00000578692 CDK7P50613 346 aa18.6■□□□□ 0.57
CRLF3-203ENST00000578692 ALDH5A1P51649 535 aaPredicted RBP18.6■□□□□ 0.57
CRLF3-203ENST00000578692 BEX3Q00994 111 aa18.6■□□□□ 0.57
CRLF3-203ENST00000578692 SHHQ15465 462 aa18.6■□□□□ 0.57
CRLF3-203ENST00000578692 RNF207Q6ZRF8 634 aa18.6■□□□□ 0.57
CRLF3-203ENST00000578692 DEFB123Q8N688 67 aa18.6■□□□□ 0.57
CRLF3-203ENST00000578692 ENAHQ8N8S7 591 aaPredicted RBP18.6■□□□□ 0.57
CRLF3-203ENST00000578692 RUFY2Q8WXA3 655 aa18.6■□□□□ 0.57
CRLF3-203ENST00000578692 AP5M1Q9H0R1 490 aa18.6■□□□□ 0.57
CRLF3-203ENST00000578692 VTA1Q9NP79 307 aa18.6■□□□□ 0.57
CRLF3-203ENST00000578692 LAMA3Q16787 3333 aa18.6■□□□□ 0.57
CRLF3-203ENST00000578692 WDR19Q8NEZ3 1342 aa18.6■□□□□ 0.57
CRLF3-203ENST00000578692 LOC102724159A0A0B4J2E5 919 aa18.59■□□□□ 0.57
CRLF3-203ENST00000578692 DYNC1LI2O43237 492 aaPredicted RBP18.59■□□□□ 0.57
CRLF3-203ENST00000578692 SMPD1P17405 629 aa18.59■□□□□ 0.57
CRLF3-203ENST00000578692 CALML3P27482 149 aa18.59■□□□□ 0.57
CRLF3-203ENST00000578692 PWP2Q15269 919 aaKnown RBP18.59■□□□□ 0.57
CRLF3-203ENST00000578692 KIAA1211Q6ZU35 1233 aa18.59■□□□□ 0.57
CRLF3-203ENST00000578692 TLK2Q86UE8 772 aa18.59■□□□□ 0.57
CRLF3-203ENST00000578692 FBXO16Q8IX29 292 aaPredicted RBP18.59■□□□□ 0.57
CRLF3-203ENST00000578692 CPVLQ9H3G5 476 aa18.59■□□□□ 0.57
CRLF3-203ENST00000578692 Q9Y3F1 56 aa18.59■□□□□ 0.57
CRLF3-203ENST00000578692 TNKSO95271 1327 aa18.59■□□□□ 0.57
CRLF3-203ENST00000578692 MROH7Q68CQ1 1323 aa18.59■□□□□ 0.57
CRLF3-203ENST00000578692 RAD50Q92878 1312 aa18.59■□□□□ 0.57
CRLF3-203ENST00000578692 LCTP09848 1927 aa18.58■□□□□ 0.57
CRLF3-203ENST00000578692 A0A0U1RQG5 324 aaPredicted RBP18.58■□□□□ 0.57
CRLF3-203ENST00000578692 ARVCFO00192 962 aa18.58■□□□□ 0.57
CRLF3-203ENST00000578692 CHMLP26374 656 aa18.58■□□□□ 0.57
CRLF3-203ENST00000578692 C9orf50Q5SZB4 431 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms