RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 ZBTB38Q8NAP3 1195 aaPredicted RBP3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 THAP3Q8WTV1 239 aaPredicted RBP3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 COPS5Q92905 334 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 PIF1Q9H611 641 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 ARHGEF4Q9NR80 690 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 C19orf73Q9NVV2 129 aa3.35□□□□□ -1.87
PTP4A1-204ENST00000578299 NPHP3-ACAD11A0A0J9YXS1 232 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 A0A1W2PQ45 241 aaPredicted RBP3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 A0A1W2PQY0 241 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 WTIPA6NIX2 430 aaPredicted RBP3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 FADS2P1A8MWK0 482 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 NRDCO43847 1150 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 ADCY3O60266 1144 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 USP2O75604 605 aaPredicted RBP3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 FAM153BP0C7A2 387 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 PABPC1P11940 636 aaKnown RBP3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 PAMP19021 973 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 GRIA2P42262 883 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 IRAK1P51617 712 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 GFRA1P56159 465 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 SLC14A2Q15849 920 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 C2orf27AQ580R0 203 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 IQCEQ6IPM2 695 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 NSMFQ6X4W1 530 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 CEP128Q6ZU80 1094 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 JAMLQ86YT9 394 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 JMYQ8N9B5 988 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 TMEM145Q8NBT3 493 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 TMEM52Q8NDY8 209 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 MYLIPQ8WY64 445 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 KCTD13Q8WZ19 329 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 IPO9Q96P70 1041 aaKnown RBP3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 SLC26A8Q96RN1 970 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 IER2Q9BTL4 223 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 EBF1Q9UH73 591 aa3.34□□□□□ -1.87
PTP4A1-204ENST00000578299 CCDC163A0A0D9SF12 145 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 PRODHO43272 600 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 DLX3O60479 287 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 THBDP07204 575 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 PLS3P13797 630 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 ECI1P42126 302 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 CEBPAP49715 358 aaPredicted RBP3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 CORO7P57737 925 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 RTP1P59025 263 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 ERVFC1P60507 584 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 CYP4F3Q08477 520 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 SNX17Q15036 470 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 TESK1Q15569 626 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 SF1Q15637 639 aaKnown RBP3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 ACBD5Q5T8D3 534 aaPredicted RBP3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 E4F1Q66K89 784 aaPredicted RBP3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 GALNT18Q6P9A2 607 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 SLCO6A1Q86UG4 719 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 SCUBE1Q8IWY4 988 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 LILRB2Q8N423 598 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 ZSWIM2Q8NEG5 633 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 NPLOC4Q8TAT6 608 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 FRS2Q8WU20 508 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 OSBP2Q969R2 916 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 KIRREL1Q96J84 757 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 MMP19Q99542 508 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 CDC6Q99741 560 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 SP110Q9HB58 689 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 GPRC5CQ9NQ84 441 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 CLEC1BQ9P126 229 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 TAF6LQ9Y6J9 622 aa3.33□□□□□ -1.88
PTP4A1-204ENST00000578299 TRBV23-1A0A0A0MS06 115 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 A0A1W2PQ27 194 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 A0A1W2PQ64 194 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 A0A1W2PQC6 194 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 A0A1W2PQD8 194 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 NOTOA8MTQ0 251 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 MEFVO15553 781 aaPredicted RBP3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 NPHS1O60500 1241 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 JUNBP17275 347 aaPredicted RBP3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 ITGB5P18084 799 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 L1CAMP32004 1257 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 LTBRP36941 435 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 SUMO1P63165 101 aaKnown RBP3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 KCNAB2Q13303 367 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 LAPTM5Q13571 262 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 PRSS53Q2L4Q9 553 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 HSF5Q4G112 596 aaPredicted RBP3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 TMEM67Q5HYA8 995 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 SLC35F1Q5T1Q4 408 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 YOD1Q5VVQ6 348 aaPredicted RBP3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 PPIL6Q8IXY8 311 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 KREMEN2Q8NCW0 462 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 ABHD4Q8TB40 342 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 SH3TC2Q8TF17 1288 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 DIO2Q92813 273 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 ASIC4Q96FT7 647 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 C1orf159Q96HA4 380 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 JMJD8Q96S16 334 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 DHRS4Q9BTZ2 278 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 C19orf44Q9H6X5 657 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 CRTAC1Q9NQ79 661 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 GPR160Q9UJ42 338 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 NPFFR2Q9Y5X5 522 aa3.32□□□□□ -1.88
PTP4A1-204ENST00000578299 C7orf72A4D263 438 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms