RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 B4DLN1 442 aa13.31□□□□□ -0.28
SMARCE1-214ENST00000578112 TMEM232C9JQI7 657 aa13.31□□□□□ -0.28
SMARCE1-214ENST00000578112 SUPT20HL2P0C7V6 817 aa13.31□□□□□ -0.28
SMARCE1-214ENST00000578112 MRPL12P52815 198 aaKnown RBP13.31□□□□□ -0.28
SMARCE1-214ENST00000578112 ICAM1P05362 532 aa13.3□□□□□ -0.28
SMARCE1-214ENST00000578112 TFAP4Q01664 338 aa13.3□□□□□ -0.28
SMARCE1-214ENST00000578112 FSCN1Q16658 493 aaKnown RBP13.3□□□□□ -0.28
SMARCE1-214ENST00000578112 TLK2Q86UE8 772 aa13.3□□□□□ -0.28
SMARCE1-214ENST00000578112 TRERF1Q96PN7 1200 aa13.3□□□□□ -0.28
SMARCE1-214ENST00000578112 RANBP17Q9H2T7 1088 aaKnown RBP13.3□□□□□ -0.28
SMARCE1-214ENST00000578112 SOWAHBA6NEL2 793 aa13.3□□□□□ -0.28
SMARCE1-214ENST00000578112 SMARCA5O60264 1052 aaPredicted RBP13.3□□□□□ -0.28
SMARCE1-214ENST00000578112 FGBP02675 491 aa13.3□□□□□ -0.28
SMARCE1-214ENST00000578112 GRIN2CQ14957 1233 aa13.3□□□□□ -0.28
SMARCE1-214ENST00000578112 LRRC47Q8N1G4 583 aaKnown RBP13.3□□□□□ -0.28
SMARCE1-214ENST00000578112 PI4K2BQ8TCG2 481 aa13.3□□□□□ -0.28
SMARCE1-214ENST00000578112 VTI1AQ96AJ9 217 aa13.3□□□□□ -0.28
SMARCE1-214ENST00000578112 LENG1Q96BZ8 264 aaPredicted RBP13.3□□□□□ -0.28
SMARCE1-214ENST00000578112 HELLSQ9NRZ9 838 aa13.3□□□□□ -0.28
SMARCE1-214ENST00000578112 CHGBP05060 677 aa13.29□□□□□ -0.28
SMARCE1-214ENST00000578112 ITGA7Q13683 1181 aa13.29□□□□□ -0.28
SMARCE1-214ENST00000578112 TSPYL2Q9H2G4 693 aaPredicted RBP13.29□□□□□ -0.28
SMARCE1-214ENST00000578112 CYP39A1Q9NYL5 469 aa13.29□□□□□ -0.28
SMARCE1-214ENST00000578112 PCDHA11Q9Y5I1 949 aa13.29□□□□□ -0.28
SMARCE1-214ENST00000578112 RAD50Q92878 1312 aa13.29□□□□□ -0.28
SMARCE1-214ENST00000578112 ADCY6O43306 1168 aa13.29□□□□□ -0.28
SMARCE1-214ENST00000578112 C16orf59Q7L2K0 433 aa13.29□□□□□ -0.28
SMARCE1-214ENST00000578112 FSD1Q9BTV5 496 aa13.29□□□□□ -0.28
SMARCE1-214ENST00000578112 PBX4Q9BYU1 374 aa13.29□□□□□ -0.28
SMARCE1-214ENST00000578112 WDR19Q8NEZ3 1342 aa13.29□□□□□ -0.28
SMARCE1-214ENST00000578112 POU3F3P20264 500 aaPredicted RBP13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 CPT1AP50416 773 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 DUSP28Q4G0W2 176 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 BRDTQ58F21 947 aaPredicted RBP13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 TAPT1Q6NXT6 567 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 ZNF365Q70YC5 407 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 RGS22Q8NE09 1264 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 NOC4LQ9BVI4 516 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 HIPK3Q9H422 1215 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 THEGQ9P2T0 379 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 PRR12Q9ULL5 1215 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 ASTN1O14525 1302 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 LCTP09848 1927 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 MCM3APO60318 1980 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 TSPY2A6NKD2 308 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 TNFRSF10AO00220 468 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 CSF2RAP15509 400 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 CCDC178Q5BJE1 867 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 PHOSPHO2Q8TCD6 241 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 UBE2Q2Q8WVN8 375 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 EVI5LQ96CN4 794 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 TTC14Q96N46 770 aa13.28□□□□□ -0.28
SMARCE1-214ENST00000578112 TOP1P11387 765 aaKnown RBP13.27□□□□□ -0.29
SMARCE1-214ENST00000578112 IKQ13123 557 aaPredicted RBP13.27□□□□□ -0.29
SMARCE1-214ENST00000578112 AAMPQ13685 434 aa13.27□□□□□ -0.29
SMARCE1-214ENST00000578112 DNERQ8NFT8 737 aa13.27□□□□□ -0.29
SMARCE1-214ENST00000578112 CCPG1Q9ULG6 757 aa13.27□□□□□ -0.29
SMARCE1-214ENST00000578112 SALL3Q9BXA9 1300 aa13.27□□□□□ -0.29
SMARCE1-214ENST00000578112 PRDM1O75626 825 aa13.27□□□□□ -0.29
SMARCE1-214ENST00000578112 PARNO95453 639 aaKnown RBP13.27□□□□□ -0.29
SMARCE1-214ENST00000578112 ACTN1P12814 892 aa13.27□□□□□ -0.29
SMARCE1-214ENST00000578112 ALAS1P13196 640 aa13.27□□□□□ -0.29
SMARCE1-214ENST00000578112 SMPD1P17405 629 aa13.27□□□□□ -0.29
SMARCE1-214ENST00000578112 CNTN2Q02246 1040 aa13.27□□□□□ -0.29
SMARCE1-214ENST00000578112 AGBL1Q96MI9 1066 aa13.27□□□□□ -0.29
SMARCE1-214ENST00000578112 TANC1Q9C0D5 1861 aa13.26□□□□□ -0.29
SMARCE1-214ENST00000578112 MX1P20591 662 aa13.26□□□□□ -0.29
SMARCE1-214ENST00000578112 NFRKBQ6P4R8 1299 aa13.26□□□□□ -0.29
SMARCE1-214ENST00000578112 MTG1Q9BT17 334 aaPredicted RBP13.26□□□□□ -0.29
SMARCE1-214ENST00000578112 ALDH5A1P51649 535 aaPredicted RBP13.25□□□□□ -0.29
SMARCE1-214ENST00000578112 MRPS5P82675 430 aaKnown RBP13.25□□□□□ -0.29
SMARCE1-214ENST00000578112 SYDE2Q5VT97 1194 aa13.25□□□□□ -0.29
SMARCE1-214ENST00000578112 SLC9A7Q96T83 725 aa13.25□□□□□ -0.29
SMARCE1-214ENST00000578112 ZBTB47Q9UFB7 747 aaPredicted RBP13.25□□□□□ -0.29
SMARCE1-214ENST00000578112 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.25□□□□□ -0.29
SMARCE1-214ENST00000578112 PITPNM1O00562 1244 aa13.25□□□□□ -0.29
SMARCE1-214ENST00000578112 MCCP23508 829 aa13.25□□□□□ -0.29
SMARCE1-214ENST00000578112 AAK1Q2M2I8 961 aa13.25□□□□□ -0.29
SMARCE1-214ENST00000578112 NOL8Q76FK4 1167 aaKnown RBP13.25□□□□□ -0.29
SMARCE1-214ENST00000578112 CCDC155Q8N6L0 562 aa13.25□□□□□ -0.29
SMARCE1-214ENST00000578112 ALDH8A1Q9H2A2 487 aaPredicted RBP13.25□□□□□ -0.29
SMARCE1-214ENST00000578112 IL17RBQ9NRM6 502 aa13.25□□□□□ -0.29
SMARCE1-214ENST00000578112 STX8Q9UNK0 236 aa13.25□□□□□ -0.29
SMARCE1-214ENST00000578112 DYNC1LI2O43237 492 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-214ENST00000578112 EDNRBP24530 442 aa13.24□□□□□ -0.29
SMARCE1-214ENST00000578112 SLC4A3P48751 1232 aa13.24□□□□□ -0.29
SMARCE1-214ENST00000578112 MFAP1P55081 439 aaKnown RBP13.24□□□□□ -0.29
SMARCE1-214ENST00000578112 CXCL17Q6UXB2 119 aa13.24□□□□□ -0.29
SMARCE1-214ENST00000578112 ASB2Q96Q27 587 aa13.24□□□□□ -0.29
SMARCE1-214ENST00000578112 PPP1R12CQ9BZL4 782 aa13.24□□□□□ -0.29
SMARCE1-214ENST00000578112 SLC28A3Q9HAS3 691 aa13.24□□□□□ -0.29
SMARCE1-214ENST00000578112 HOMER2Q9NSB8 354 aa13.24□□□□□ -0.29
SMARCE1-214ENST00000578112 CXXC1Q9P0U4 656 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-214ENST00000578112 SLC4A7Q9Y6M7 1214 aa13.24□□□□□ -0.29
SMARCE1-214ENST00000578112 GRIN2DO15399 1336 aa13.24□□□□□ -0.29
SMARCE1-214ENST00000578112 BAIAP3O94812 1187 aa13.24□□□□□ -0.29
SMARCE1-214ENST00000578112 SESTD1Q86VW0 696 aa13.24□□□□□ -0.29
SMARCE1-214ENST00000578112 RNF41Q9H4P4 317 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-214ENST00000578112 B4GALT4O60513 344 aa13.23□□□□□ -0.29
SMARCE1-214ENST00000578112 SNHG28P0DPA3 235 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms