RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 DSCC1Q9BVC3 393 aa17.56■□□□□ 0.4
MKS1-205ENST00000577315 CYP39A1Q9NYL5 469 aa17.56■□□□□ 0.4
MKS1-205ENST00000577315 CTNNA3Q9UI47 895 aa17.56■□□□□ 0.4
MKS1-205ENST00000577315 LRRC37A2A6NM11 1700 aa17.55■□□□□ 0.4
MKS1-205ENST00000577315 SOWAHBA6NEL2 793 aa17.55■□□□□ 0.4
MKS1-205ENST00000577315 DCDC2CA8MYV0 355 aa17.55■□□□□ 0.4
MKS1-205ENST00000577315 NKX3-2P78367 333 aa17.55■□□□□ 0.4
MKS1-205ENST00000577315 MUM1L1Q5H9M0 696 aa17.55■□□□□ 0.4
MKS1-205ENST00000577315 GPATCH4Q5T3I0 446 aaKnown RBP17.55■□□□□ 0.4
MKS1-205ENST00000577315 NSMFQ6X4W1 530 aa17.55■□□□□ 0.4
MKS1-205ENST00000577315 ANKRD33Q7Z3H0 272 aa17.55■□□□□ 0.4
MKS1-205ENST00000577315 TBC1D10CQ8IV04 446 aa17.55■□□□□ 0.4
MKS1-205ENST00000577315 KATNBL1Q9H079 304 aa17.55■□□□□ 0.4
MKS1-205ENST00000577315 ADD3Q9UEY8 706 aaKnown RBP17.55■□□□□ 0.4
MKS1-205ENST00000577315 KIAA0355O15063 1070 aa17.54■□□□□ 0.4
MKS1-205ENST00000577315 SNHG28P0DPA3 235 aa17.54■□□□□ 0.4
MKS1-205ENST00000577315 SLC16A2P36021 539 aa17.54■□□□□ 0.4
MKS1-205ENST00000577315 SNAP25P60880 206 aa17.54■□□□□ 0.4
MKS1-205ENST00000577315 TNFAIP2Q03169 654 aa17.54■□□□□ 0.4
MKS1-205ENST00000577315 ZNF543Q08ER8 600 aa17.54■□□□□ 0.4
MKS1-205ENST00000577315 IMMTQ16891 758 aaKnown RBP17.54■□□□□ 0.4
MKS1-205ENST00000577315 TTBK2Q6IQ55 1244 aa17.54■□□□□ 0.4
MKS1-205ENST00000577315 BADQ92934 168 aa17.54■□□□□ 0.4
MKS1-205ENST00000577315 GPCPD1Q9NPB8 672 aa17.54■□□□□ 0.4
MKS1-205ENST00000577315 SUPT16HQ9Y5B9 1047 aaKnown RBP17.54■□□□□ 0.4
MKS1-205ENST00000577315 FRMPD2Q68DX3 1309 aaPredicted RBP17.53■□□□□ 0.4
MKS1-205ENST00000577315 WDR19Q8NEZ3 1342 aa17.53■□□□□ 0.4
MKS1-205ENST00000577315 TRIM43BA6NCK2 446 aa17.53■□□□□ 0.4
MKS1-205ENST00000577315 PQBP1O60828 265 aaKnown RBP17.53■□□□□ 0.4
MKS1-205ENST00000577315 ASGR1P07306 291 aa17.53■□□□□ 0.4
MKS1-205ENST00000577315 RAG1P15918 1043 aa17.53■□□□□ 0.4
MKS1-205ENST00000577315 GNASQ5JWF2 1037 aa17.53■□□□□ 0.4
MKS1-205ENST00000577315 IQSEC1Q6DN90 963 aa17.53■□□□□ 0.4
MKS1-205ENST00000577315 FAM109BQ6ICB4 259 aaPredicted RBP17.53■□□□□ 0.4
MKS1-205ENST00000577315 RASGRP2Q7LDG7 609 aa17.53■□□□□ 0.4
MKS1-205ENST00000577315 SH3RF1Q7Z6J0 888 aa17.53■□□□□ 0.4
MKS1-205ENST00000577315 DEFB123Q8N688 67 aa17.53■□□□□ 0.4
MKS1-205ENST00000577315 TRIM43Q96BQ3 446 aaPredicted RBP17.53■□□□□ 0.4
MKS1-205ENST00000577315 MPHOSPH6Q99547 160 aaKnown RBP17.53■□□□□ 0.4
MKS1-205ENST00000577315 SEZ6LQ9BYH1 1024 aa17.53■□□□□ 0.4
MKS1-205ENST00000577315 MAF1Q9H063 256 aa17.53■□□□□ 0.4
MKS1-205ENST00000577315 CNNM2Q9H8M5 875 aa17.53■□□□□ 0.4
MKS1-205ENST00000577315 VTA1Q9NP79 307 aa17.53■□□□□ 0.4
MKS1-205ENST00000577315 TMEM39AQ9NV64 488 aa17.53■□□□□ 0.4
MKS1-205ENST00000577315 Q9Y3F1 56 aa17.53■□□□□ 0.4
MKS1-205ENST00000577315 NEDD4P46934 1319 aa17.52■□□□□ 0.4
MKS1-205ENST00000577315 A0A0U1RQG5 324 aaPredicted RBP17.52■□□□□ 0.4
MKS1-205ENST00000577315 MYADML2A6NDP7 307 aa17.52■□□□□ 0.4
MKS1-205ENST00000577315 ZEB2O60315 1214 aa17.52■□□□□ 0.4
MKS1-205ENST00000577315 CABYRO75952 493 aa17.52■□□□□ 0.4
MKS1-205ENST00000577315 NOL8Q76FK4 1167 aaKnown RBP17.52■□□□□ 0.4
MKS1-205ENST00000577315 MORC4Q8TE76 937 aa17.52■□□□□ 0.4
MKS1-205ENST00000577315 ANKS1AQ92625 1134 aa17.52■□□□□ 0.4
MKS1-205ENST00000577315 VTI1AQ96AJ9 217 aa17.52■□□□□ 0.4
MKS1-205ENST00000577315 KRT23Q9C075 422 aa17.52■□□□□ 0.4
MKS1-205ENST00000577315 AP5M1Q9H0R1 490 aa17.52■□□□□ 0.4
MKS1-205ENST00000577315 GNEQ9Y223 722 aaKnown RBP17.52■□□□□ 0.4
MKS1-205ENST00000577315 RAD50Q92878 1312 aa17.51■□□□□ 0.39
MKS1-205ENST00000577315 B4DLN1 442 aa17.51■□□□□ 0.39
MKS1-205ENST00000577315 TLR3O15455 904 aaKnown RBP17.51■□□□□ 0.39
MKS1-205ENST00000577315 ADCY6O43306 1168 aa17.51■□□□□ 0.39
MKS1-205ENST00000577315 MRPL12P52815 198 aaKnown RBP17.51■□□□□ 0.39
MKS1-205ENST00000577315 BAATQ14032 418 aaPredicted RBP17.51■□□□□ 0.39
MKS1-205ENST00000577315 KAT14Q9H8E8 782 aa17.51■□□□□ 0.39
MKS1-205ENST00000577315 PTPDC1A2A3K4 754 aa17.5■□□□□ 0.39
MKS1-205ENST00000577315 ARVCFO00192 962 aa17.5■□□□□ 0.39
MKS1-205ENST00000577315 KDM4AO75164 1064 aa17.5■□□□□ 0.39
MKS1-205ENST00000577315 CDK7P50613 346 aa17.5■□□□□ 0.39
MKS1-205ENST00000577315 ALDH5A1P51649 535 aaPredicted RBP17.5■□□□□ 0.39
MKS1-205ENST00000577315 FAAP100Q0VG06 881 aa17.5■□□□□ 0.39
MKS1-205ENST00000577315 SHHQ15465 462 aa17.5■□□□□ 0.39
MKS1-205ENST00000577315 TTC22Q5TAA0 569 aa17.5■□□□□ 0.39
MKS1-205ENST00000577315 RNF207Q6ZRF8 634 aa17.5■□□□□ 0.39
MKS1-205ENST00000577315 TLK2Q86UE8 772 aa17.5■□□□□ 0.39
MKS1-205ENST00000577315 PNMA1Q8ND90 353 aa17.5■□□□□ 0.39
MKS1-205ENST00000577315 RUFY2Q8WXA3 655 aa17.5■□□□□ 0.39
MKS1-205ENST00000577315 ZSCAN10Q96SZ4 725 aaPredicted RBP17.5■□□□□ 0.39
MKS1-205ENST00000577315 ZKSCAN3Q9BRR0 538 aa17.5■□□□□ 0.39
MKS1-205ENST00000577315 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.49■□□□□ 0.39
MKS1-205ENST00000577315 B4E1Z4 1266 aa17.49■□□□□ 0.39
MKS1-205ENST00000577315 NFIBO00712 420 aa17.49■□□□□ 0.39
MKS1-205ENST00000577315 FPGSQ05932 587 aa17.49■□□□□ 0.39
MKS1-205ENST00000577315 ASPRV1Q53RT3 343 aa17.49■□□□□ 0.39
MKS1-205ENST00000577315 TAPT1Q6NXT6 567 aa17.49■□□□□ 0.39
MKS1-205ENST00000577315 KIAA1211Q6ZU35 1233 aa17.49■□□□□ 0.39
MKS1-205ENST00000577315 RGS22Q8NE09 1264 aa17.49■□□□□ 0.39
MKS1-205ENST00000577315 DNERQ8NFT8 737 aa17.49■□□□□ 0.39
MKS1-205ENST00000577315 MTMR10Q9NXD2 777 aa17.49■□□□□ 0.39
MKS1-205ENST00000577315 STXBP5LQ9Y2K9 1186 aa17.49■□□□□ 0.39
MKS1-205ENST00000577315 ASTN1O14525 1302 aa17.48■□□□□ 0.39
MKS1-205ENST00000577315 CTAGE5O15320 804 aa17.48■□□□□ 0.39
MKS1-205ENST00000577315 DYNC1LI2O43237 492 aaPredicted RBP17.48■□□□□ 0.39
MKS1-205ENST00000577315 TIMP1P01033 207 aa17.48■□□□□ 0.39
MKS1-205ENST00000577315 SMPD1P17405 629 aa17.48■□□□□ 0.39
MKS1-205ENST00000577315 FSCN1Q16658 493 aaKnown RBP17.48■□□□□ 0.39
MKS1-205ENST00000577315 Q7L0L9 218 aa17.48■□□□□ 0.39
MKS1-205ENST00000577315 FBXO16Q8IX29 292 aaPredicted RBP17.48■□□□□ 0.39
MKS1-205ENST00000577315 CLEC4DQ8WXI8 215 aa17.48■□□□□ 0.39
MKS1-205ENST00000577315 UBAC1Q9BSL1 405 aa17.48■□□□□ 0.39
MKS1-205ENST00000577315 ZSWIM5Q9P217 1185 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms