RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 ZCCHC4Q9H5U6 513 aa8.15□□□□□ -1.1
SMCHD1-202ENST00000577300 FAM86C1Q9NVL1 165 aa8.15□□□□□ -1.1
SMCHD1-202ENST00000577300 PCDHA5Q9Y5H7 936 aa8.15□□□□□ -1.1
SMCHD1-202ENST00000577300 SRGAP3O43295 1099 aa8.14□□□□□ -1.11
SMCHD1-202ENST00000577300 MSL3P1P0C860 447 aa8.14□□□□□ -1.11
SMCHD1-202ENST00000577300 GIPRP48546 466 aa8.14□□□□□ -1.11
SMCHD1-202ENST00000577300 MAPKAPK2P49137 400 aa8.14□□□□□ -1.11
SMCHD1-202ENST00000577300 EIF6P56537 245 aaKnown RBP8.14□□□□□ -1.11
SMCHD1-202ENST00000577300 CORO7P57737 925 aa8.14□□□□□ -1.11
SMCHD1-202ENST00000577300 C20orf173Q96LM9 149 aa8.14□□□□□ -1.11
SMCHD1-202ENST00000577300 NOL6Q9H6R4 1146 aaKnown RBP8.14□□□□□ -1.11
SMCHD1-202ENST00000577300 PHAXQ9H814 394 aaKnown RBP8.14□□□□□ -1.11
SMCHD1-202ENST00000577300 WHRNQ9P202 907 aa8.14□□□□□ -1.11
SMCHD1-202ENST00000577300 EFR3BQ9Y2G0 817 aa8.14□□□□□ -1.11
SMCHD1-202ENST00000577300 NCANO14594 1321 aa8.13□□□□□ -1.11
SMCHD1-202ENST00000577300 IRS2Q9Y4H2 1338 aa8.13□□□□□ -1.11
SMCHD1-202ENST00000577300 TRIM13O60858 407 aa8.13□□□□□ -1.11
SMCHD1-202ENST00000577300 TBC1D8O95759 1140 aa8.13□□□□□ -1.11
SMCHD1-202ENST00000577300 CD3EP07766 207 aa8.13□□□□□ -1.11
SMCHD1-202ENST00000577300 PLEKHN1Q494U1 663 aaPredicted RBP8.13□□□□□ -1.11
SMCHD1-202ENST00000577300 CNKSR3Q6P9H4 555 aa8.13□□□□□ -1.11
SMCHD1-202ENST00000577300 FAM129CQ86XR2 697 aa8.13□□□□□ -1.11
SMCHD1-202ENST00000577300 NLGN2Q8NFZ4 835 aa8.13□□□□□ -1.11
SMCHD1-202ENST00000577300 GPRASP2Q96D09 838 aa8.13□□□□□ -1.11
SMCHD1-202ENST00000577300 PTCHD1Q96NR3 888 aa8.13□□□□□ -1.11
SMCHD1-202ENST00000577300 HAUS7Q99871 368 aa8.13□□□□□ -1.11
SMCHD1-202ENST00000577300 PDLIM7Q9NR12 457 aa8.13□□□□□ -1.11
SMCHD1-202ENST00000577300 B8ZZF3 427 aa8.12□□□□□ -1.11
SMCHD1-202ENST00000577300 PRRG2O14669 202 aa8.12□□□□□ -1.11
SMCHD1-202ENST00000577300 CYBBP04839 570 aa8.12□□□□□ -1.11
SMCHD1-202ENST00000577300 DBHP09172 617 aa8.12□□□□□ -1.11
SMCHD1-202ENST00000577300 IFNGR1P15260 489 aa8.12□□□□□ -1.11
SMCHD1-202ENST00000577300 GNPTABQ3T906 1256 aa8.12□□□□□ -1.11
SMCHD1-202ENST00000577300 ZC3H14Q6PJT7 736 aaKnown RBP8.12□□□□□ -1.11
SMCHD1-202ENST00000577300 PAQR3Q6TCH7 311 aa8.12□□□□□ -1.11
SMCHD1-202ENST00000577300 RGS22Q8NE09 1264 aa8.12□□□□□ -1.11
SMCHD1-202ENST00000577300 ZDHHC15Q96MV8 337 aa8.12□□□□□ -1.11
SMCHD1-202ENST00000577300 KLHL25Q9H0H3 589 aa8.12□□□□□ -1.11
SMCHD1-202ENST00000577300 A0A1W2PQH9 124 aa8.11□□□□□ -1.11
SMCHD1-202ENST00000577300 GJA8P48165 433 aa8.11□□□□□ -1.11
SMCHD1-202ENST00000577300 RCSD1Q6JBY9 416 aa8.11□□□□□ -1.11
SMCHD1-202ENST00000577300 GBP3Q9H0R5 595 aa8.11□□□□□ -1.11
SMCHD1-202ENST00000577300 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.11□□□□□ -1.11
SMCHD1-202ENST00000577300 BUB1BO60566 1050 aaPredicted RBP8.1□□□□□ -1.11
SMCHD1-202ENST00000577300 L1CAMP32004 1257 aa8.1□□□□□ -1.11
SMCHD1-202ENST00000577300 HEATR6Q6AI08 1181 aaKnown RBP8.1□□□□□ -1.11
SMCHD1-202ENST00000577300 A0A0G2JLL6 359 aaPredicted RBP8.09□□□□□ -1.11
SMCHD1-202ENST00000577300 A0A1W2PQJ5 194 aa8.09□□□□□ -1.11
SMCHD1-202ENST00000577300 AURKAO14965 403 aa8.09□□□□□ -1.11
SMCHD1-202ENST00000577300 IGFBP6P24592 240 aaPredicted RBP8.09□□□□□ -1.11
SMCHD1-202ENST00000577300 HDLBPQ00341 1268 aaKnown RBP8.09□□□□□ -1.11
SMCHD1-202ENST00000577300 CAP1Q01518 475 aa8.09□□□□□ -1.11
SMCHD1-202ENST00000577300 SLC7A5Q01650 507 aa8.09□□□□□ -1.11
SMCHD1-202ENST00000577300 PPP2R5DQ14738 602 aa8.09□□□□□ -1.11
SMCHD1-202ENST00000577300 EEF1DP3Q658K8 133 aa8.09□□□□□ -1.11
SMCHD1-202ENST00000577300 NT5DC4Q86YG4 428 aa8.09□□□□□ -1.11
SMCHD1-202ENST00000577300 SASH1O94885 1247 aa8.08□□□□□ -1.12
SMCHD1-202ENST00000577300 PFKLP17858 780 aa8.08□□□□□ -1.12
SMCHD1-202ENST00000577300 FBLN1P23142 703 aa8.08□□□□□ -1.12
SMCHD1-202ENST00000577300 NCKAP1LP55160 1127 aa8.08□□□□□ -1.12
SMCHD1-202ENST00000577300 ZNF200P98182 395 aaPredicted RBP8.08□□□□□ -1.12
SMCHD1-202ENST00000577300 BICRALQ6AI39 1079 aa8.08□□□□□ -1.12
SMCHD1-202ENST00000577300 ADCY4Q8NFM4 1077 aa8.08□□□□□ -1.12
SMCHD1-202ENST00000577300 KLHL6Q8WZ60 621 aa8.08□□□□□ -1.12
SMCHD1-202ENST00000577300 RELTQ969Z4 430 aa8.08□□□□□ -1.12
SMCHD1-202ENST00000577300 SHDQ96IW2 340 aa8.08□□□□□ -1.12
SMCHD1-202ENST00000577300 MCMBPQ9BTE3 642 aa8.08□□□□□ -1.12
SMCHD1-202ENST00000577300 PPM1BO75688 479 aa8.07□□□□□ -1.12
SMCHD1-202ENST00000577300 EPHX1P07099 455 aa8.07□□□□□ -1.12
SMCHD1-202ENST00000577300 CASP7P55210 303 aa8.07□□□□□ -1.12
SMCHD1-202ENST00000577300 TARBP2Q15633 366 aaKnown RBP8.07□□□□□ -1.12
SMCHD1-202ENST00000577300 LINC01356Q8N9X3 169 aa8.07□□□□□ -1.12
SMCHD1-202ENST00000577300 MRRFQ96E11 262 aaKnown RBP8.07□□□□□ -1.12
SMCHD1-202ENST00000577300 RCC1LQ96I51 464 aaKnown RBP8.07□□□□□ -1.12
SMCHD1-202ENST00000577300 PWWP2AQ96N64 755 aa8.07□□□□□ -1.12
SMCHD1-202ENST00000577300 XYLT2Q9H1B5 865 aa8.07□□□□□ -1.12
SMCHD1-202ENST00000577300 RTEL1Q9NZ71 1219 aa8.07□□□□□ -1.12
SMCHD1-202ENST00000577300 PCDHB10Q9UN67 800 aa8.07□□□□□ -1.12
SMCHD1-202ENST00000577300 NASPP49321 788 aaPredicted RBP8.06□□□□□ -1.12
SMCHD1-202ENST00000577300 GRB10Q13322 594 aa8.06□□□□□ -1.12
SMCHD1-202ENST00000577300 ADAT2Q7Z6V5 191 aaKnown RBP8.06□□□□□ -1.12
SMCHD1-202ENST00000577300 SP8Q8IXZ3 490 aa8.06□□□□□ -1.12
SMCHD1-202ENST00000577300 ARHGEF39Q8N4T4 335 aa8.06□□□□□ -1.12
SMCHD1-202ENST00000577300 SEC16BQ96JE7 1060 aa8.06□□□□□ -1.12
SMCHD1-202ENST00000577300 CGGBP1Q9UFW8 167 aaPredicted RBP8.06□□□□□ -1.12
SMCHD1-202ENST00000577300 VMACQ2NL98 169 aa8.05□□□□□ -1.12
SMCHD1-202ENST00000577300 NLGN1Q8N2Q7 840 aa8.05□□□□□ -1.12
SMCHD1-202ENST00000577300 FGD4Q96M96 766 aa8.05□□□□□ -1.12
SMCHD1-202ENST00000577300 BACE2Q9Y5Z0 518 aa8.05□□□□□ -1.12
SMCHD1-202ENST00000577300 HCFC2Q9Y5Z7 792 aa8.05□□□□□ -1.12
SMCHD1-202ENST00000577300 F8W031 263 aaPredicted RBP8.04□□□□□ -1.12
SMCHD1-202ENST00000577300 STXBP3O00186 592 aa8.04□□□□□ -1.12
SMCHD1-202ENST00000577300 VAMP4O75379 141 aa8.04□□□□□ -1.12
SMCHD1-202ENST00000577300 GLI4P10075 376 aa8.04□□□□□ -1.12
SMCHD1-202ENST00000577300 TACR1P25103 407 aa8.04□□□□□ -1.12
SMCHD1-202ENST00000577300 AMPD2Q01433 879 aa8.04□□□□□ -1.12
SMCHD1-202ENST00000577300 NFIXQ14938 502 aa8.04□□□□□ -1.12
SMCHD1-202ENST00000577300 RNF38Q9H0F5 515 aa8.04□□□□□ -1.12
SMCHD1-202ENST00000577300 LUC7LQ9NQ29 371 aaKnown RBP8.04□□□□□ -1.12
SMCHD1-202ENST00000577300 SUSD2Q9UGT4 822 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms