RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 BRPF3Q9ULD4 1205 aa18.26■□□□□ 0.51
NCBP3-207ENST00000577169 POTEB2H3BUK9 544 aa18.25■□□□□ 0.51
NCBP3-207ENST00000577169 NFIBO00712 420 aa18.25■□□□□ 0.51
NCBP3-207ENST00000577169 CYTH3O43739 400 aa18.25■□□□□ 0.51
NCBP3-207ENST00000577169 SEC24BO95487 1268 aa18.25■□□□□ 0.51
NCBP3-207ENST00000577169 TFRCP02786 760 aaKnown RBP18.25■□□□□ 0.51
NCBP3-207ENST00000577169 CALM1P0DP23 149 aa18.25■□□□□ 0.51
NCBP3-207ENST00000577169 CALM2P0DP24 149 aa18.25■□□□□ 0.51
NCBP3-207ENST00000577169 CALM3P0DP25 149 aa18.25■□□□□ 0.51
NCBP3-207ENST00000577169 RPS6KB1P23443 525 aa18.25■□□□□ 0.51
NCBP3-207ENST00000577169 SYNE3Q6ZMZ3 975 aa18.25■□□□□ 0.51
NCBP3-207ENST00000577169 Q6ZUG5 572 aa18.25■□□□□ 0.51
NCBP3-207ENST00000577169 CCDC144CPQ8IYA2 1237 aa18.25■□□□□ 0.51
NCBP3-207ENST00000577169 TRPV1Q8NER1 839 aa18.25■□□□□ 0.51
NCBP3-207ENST00000577169 TINF2Q9BSI4 451 aa18.25■□□□□ 0.51
NCBP3-207ENST00000577169 CYP39A1Q9NYL5 469 aa18.25■□□□□ 0.51
NCBP3-207ENST00000577169 SOWAHBA6NEL2 793 aa18.24■□□□□ 0.51
NCBP3-207ENST00000577169 CASTP20810 708 aaKnown RBP18.24■□□□□ 0.51
NCBP3-207ENST00000577169 CNGA1P29973 690 aa18.24■□□□□ 0.51
NCBP3-207ENST00000577169 KIF5BP33176 963 aa18.24■□□□□ 0.51
NCBP3-207ENST00000577169 FGD1P98174 961 aa18.24■□□□□ 0.51
NCBP3-207ENST00000577169 BAATQ14032 418 aaPredicted RBP18.24■□□□□ 0.51
NCBP3-207ENST00000577169 FAM133AQ8N9E0 248 aa18.24■□□□□ 0.51
NCBP3-207ENST00000577169 FANCBQ8NB91 859 aa18.24■□□□□ 0.51
NCBP3-207ENST00000577169 FGD4Q96M96 766 aa18.24■□□□□ 0.51
NCBP3-207ENST00000577169 PIGSQ96S52 555 aa18.24■□□□□ 0.51
NCBP3-207ENST00000577169 RBBP6Q7Z6E9 1792 aaKnown RBP18.24■□□□□ 0.51
NCBP3-207ENST00000577169 PFASO15067 1338 aa18.23■□□□□ 0.51
NCBP3-207ENST00000577169 ZBTB5O15062 677 aa18.23■□□□□ 0.51
NCBP3-207ENST00000577169 CYBAP13498 195 aa18.23■□□□□ 0.51
NCBP3-207ENST00000577169 GNAQP50148 359 aa18.23■□□□□ 0.51
NCBP3-207ENST00000577169 APOA5Q6Q788 366 aa18.23■□□□□ 0.51
NCBP3-207ENST00000577169 MAMDC4Q6UXC1 1216 aa18.23■□□□□ 0.51
NCBP3-207ENST00000577169 ZNF467Q7Z7K2 595 aaPredicted RBP18.23■□□□□ 0.51
NCBP3-207ENST00000577169 HOMER1Q86YM7 354 aa18.23■□□□□ 0.51
NCBP3-207ENST00000577169 SRBD1Q8N5C6 995 aaKnown RBP18.23■□□□□ 0.51
NCBP3-207ENST00000577169 PIBF1Q8WXW3 757 aa18.23■□□□□ 0.51
NCBP3-207ENST00000577169 TBC1D5Q92609 795 aa18.23■□□□□ 0.51
NCBP3-207ENST00000577169 SHISA4Q96DD7 197 aa18.23■□□□□ 0.51
NCBP3-207ENST00000577169 PURBQ96QR8 312 aaKnown RBP18.23■□□□□ 0.51
NCBP3-207ENST00000577169 LZTS2Q9BRK4 669 aa18.23■□□□□ 0.51
NCBP3-207ENST00000577169 AMNQ9BXJ7 453 aa18.23■□□□□ 0.51
NCBP3-207ENST00000577169 ZSWIM6Q9HCJ5 1215 aa18.23■□□□□ 0.51
NCBP3-207ENST00000577169 KIAA0100Q14667 2235 aaKnown RBP18.23■□□□□ 0.51
NCBP3-207ENST00000577169 MYH6P13533 1939 aa18.23■□□□□ 0.51
NCBP3-207ENST00000577169 ABCB11O95342 1321 aa18.23■□□□□ 0.51
NCBP3-207ENST00000577169 BAZ2BQ9UIF8 2168 aaKnown RBP18.23■□□□□ 0.51
NCBP3-207ENST00000577169 KLF18A0A0U1RQI7 1052 aa18.22■□□□□ 0.51
NCBP3-207ENST00000577169 PTPDC1A2A3K4 754 aa18.22■□□□□ 0.51
NCBP3-207ENST00000577169 EIF5BO60841 1220 aaKnown RBP18.22■□□□□ 0.51
NCBP3-207ENST00000577169 PPP1R11O60927 126 aaPredicted RBP18.22■□□□□ 0.51
NCBP3-207ENST00000577169 PLEKHA8P1O95397 391 aa18.22■□□□□ 0.51
NCBP3-207ENST00000577169 SNAI1O95863 264 aaPredicted RBP18.22■□□□□ 0.51
NCBP3-207ENST00000577169 SMARCA1P28370 1054 aa18.22■□□□□ 0.51
NCBP3-207ENST00000577169 APOBRQ0VD83 1088 aa18.22■□□□□ 0.51
NCBP3-207ENST00000577169 LHX8Q68G74 356 aa18.22■□□□□ 0.51
NCBP3-207ENST00000577169 RNF207Q6ZRF8 634 aa18.22■□□□□ 0.51
NCBP3-207ENST00000577169 RUFY3Q7L099 469 aa18.22■□□□□ 0.51
NCBP3-207ENST00000577169 MICU3Q86XE3 530 aa18.22■□□□□ 0.51
NCBP3-207ENST00000577169 CMTR1Q8N1G2 835 aaKnown RBP18.22■□□□□ 0.51
NCBP3-207ENST00000577169 MSL3Q8N5Y2 521 aaKnown RBP18.22■□□□□ 0.51
NCBP3-207ENST00000577169 TM6SF1Q9BZW5 370 aa18.22■□□□□ 0.51
NCBP3-207ENST00000577169 CRISPLD2Q9H0B8 497 aa18.22■□□□□ 0.51
NCBP3-207ENST00000577169 MRPL11Q9Y3B7 192 aaKnown RBP18.22■□□□□ 0.51
NCBP3-207ENST00000577169 PNMA6FA0A0J9YX94 578 aa18.21■□□□□ 0.51
NCBP3-207ENST00000577169 ZBTB43O43298 467 aa18.21■□□□□ 0.51
NCBP3-207ENST00000577169 CALML3P27482 149 aa18.21■□□□□ 0.51
NCBP3-207ENST00000577169 MLLT1Q03111 559 aaPredicted RBP18.21■□□□□ 0.51
NCBP3-207ENST00000577169 CCDC82Q8N4S0 544 aa18.21■□□□□ 0.51
NCBP3-207ENST00000577169 RGS22Q8NE09 1264 aa18.21■□□□□ 0.51
NCBP3-207ENST00000577169 BRF1Q92994 677 aa18.21■□□□□ 0.51
NCBP3-207ENST00000577169 SPZ1Q9BXG8 430 aa18.21■□□□□ 0.51
NCBP3-207ENST00000577169 NAP1L2Q9ULW6 460 aaPredicted RBP18.21■□□□□ 0.51
NCBP3-207ENST00000577169 CYP46A1Q9Y6A2 500 aa18.21■□□□□ 0.51
NCBP3-207ENST00000577169 CAPN2P17655 700 aa18.2■□□□□ 0.5
NCBP3-207ENST00000577169 RPS6P62753 249 aaKnown RBP18.2■□□□□ 0.5
NCBP3-207ENST00000577169 SLC30A10Q6XR72 485 aa18.2■□□□□ 0.5
NCBP3-207ENST00000577169 FBXL16Q8N461 479 aa18.2■□□□□ 0.5
NCBP3-207ENST00000577169 AGXT2Q9BYV1 514 aa18.2■□□□□ 0.5
NCBP3-207ENST00000577169 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.2■□□□□ 0.5
NCBP3-207ENST00000577169 DDX20Q9UHI6 824 aaKnown RBP18.2■□□□□ 0.5
NCBP3-207ENST00000577169 NRBP1Q9UHY1 535 aa18.2■□□□□ 0.5
NCBP3-207ENST00000577169 PCDHA1Q9Y5I3 950 aa18.2■□□□□ 0.5
NCBP3-207ENST00000577169 GTF3C3Q9Y5Q9 886 aa18.2■□□□□ 0.5
NCBP3-207ENST00000577169 HTTP42858 3142 aa18.2■□□□□ 0.5
NCBP3-207ENST00000577169 SYNGAP1Q96PV0 1343 aa18.2■□□□□ 0.5
NCBP3-207ENST00000577169 ASB14A6NK59 587 aa18.19■□□□□ 0.5
NCBP3-207ENST00000577169 ZNF865P0CJ78 1059 aaPredicted RBP18.19■□□□□ 0.5
NCBP3-207ENST00000577169 C8orf34Q49A92 452 aa18.19■□□□□ 0.5
NCBP3-207ENST00000577169 ANO1Q5XXA6 986 aa18.19■□□□□ 0.5
NCBP3-207ENST00000577169 TMTC3Q6ZXV5 915 aa18.19■□□□□ 0.5
NCBP3-207ENST00000577169 ARMCX2Q7L311 632 aa18.19■□□□□ 0.5
NCBP3-207ENST00000577169 MCF2L2Q86YR7 1114 aa18.19■□□□□ 0.5
NCBP3-207ENST00000577169 RRP36Q96EU6 259 aaKnown RBP18.19■□□□□ 0.5
NCBP3-207ENST00000577169 UPF3BQ9BZI7 483 aaKnown RBP18.19■□□□□ 0.5
NCBP3-207ENST00000577169 FAM217BQ9NTX9 383 aaPredicted RBP18.19■□□□□ 0.5
NCBP3-207ENST00000577169 RBM28Q9NW13 759 aaKnown RBP18.19■□□□□ 0.5
NCBP3-207ENST00000577169 OGDHLQ9ULD0 1010 aa18.19■□□□□ 0.5
NCBP3-207ENST00000577169 CNPY2Q9Y2B0 182 aa18.19■□□□□ 0.5
NCBP3-207ENST00000577169 DDX49Q9Y6V7 483 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms