RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-223	ENST00000576932	GPR37L1	O60883	481 aa		11.24	□□□□□ -0.61
TOM1L1-223	ENST00000576932	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.24	□□□□□ -0.61
TOM1L1-223	ENST00000576932	POU3F3	P20264	500 aa	Predicted RBP	11.24	□□□□□ -0.61
TOM1L1-223	ENST00000576932	CST5	P28325	142 aa	Predicted RBP	11.24	□□□□□ -0.61
TOM1L1-223	ENST00000576932	GUCY1A2	P33402	732 aa		11.24	□□□□□ -0.61
TOM1L1-223	ENST00000576932	CDK7	P50613	346 aa		11.24	□□□□□ -0.61
TOM1L1-223	ENST00000576932	MCM6	Q14566	821 aa		11.24	□□□□□ -0.61
TOM1L1-223	ENST00000576932	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.24	□□□□□ -0.61
TOM1L1-223	ENST00000576932	NCAPG2	Q86XI2	1143 aa		11.24	□□□□□ -0.61
TOM1L1-223	ENST00000576932	MSL3	Q8N5Y2	521 aa	Known RBP	11.24	□□□□□ -0.61
TOM1L1-223	ENST00000576932	KLHDC9	Q8NEP7	349 aa		11.24	□□□□□ -0.61
TOM1L1-223	ENST00000576932	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.24	□□□□□ -0.61
TOM1L1-223	ENST00000576932	GLT1D1	Q96MS3	346 aa		11.24	□□□□□ -0.61
TOM1L1-223	ENST00000576932	NECAB3	Q96P71	396 aa	Predicted RBP	11.24	□□□□□ -0.61
TOM1L1-223	ENST00000576932	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.24	□□□□□ -0.61
TOM1L1-223	ENST00000576932	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.23	□□□□□ -0.61
TOM1L1-223	ENST00000576932	TCF20	Q9UGU0	1960 aa	Known RBP	11.23	□□□□□ -0.61
TOM1L1-223	ENST00000576932	CSF2RA	P15509	400 aa		11.23	□□□□□ -0.61
TOM1L1-223	ENST00000576932	SHMT1	P34896	483 aa		11.23	□□□□□ -0.61
TOM1L1-223	ENST00000576932	COPB2	P35606	906 aa		11.23	□□□□□ -0.61
TOM1L1-223	ENST00000576932	ZNF792	Q3KQV3	632 aa		11.23	□□□□□ -0.61
TOM1L1-223	ENST00000576932	ZNF365	Q70YC5	407 aa		11.23	□□□□□ -0.61
TOM1L1-223	ENST00000576932	TANGO6	Q9C0B7	1094 aa		11.23	□□□□□ -0.61
TOM1L1-223	ENST00000576932	IL23A	Q9NPF7	189 aa		11.23	□□□□□ -0.61
TOM1L1-223	ENST00000576932	GPR108	Q9NPR9	543 aa		11.23	□□□□□ -0.61
TOM1L1-223	ENST00000576932	COG5	Q9UP83	839 aa		11.23	□□□□□ -0.61
TOM1L1-223	ENST00000576932	CNPY2	Q9Y2B0	182 aa		11.23	□□□□□ -0.61
TOM1L1-223	ENST00000576932	SYNRG	Q9UMZ2	1314 aa		11.23	□□□□□ -0.61
TOM1L1-223	ENST00000576932		E9PSI1	815 aa		11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932	TLR3	O15455	904 aa	Known RBP	11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932	CYP2E1	P05181	493 aa	Predicted RBP	11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932	GNAI3	P08754	354 aa		11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932	USP5	P45974	858 aa		11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932	PLS1	Q14651	629 aa		11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932	CCDC158	Q5M9N0	1113 aa		11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932	LYPD8	Q6UX82	237 aa		11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932	PCSK9	Q8NBP7	692 aa	Known RBP	11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932	MMP19	Q99542	508 aa		11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932	MEIS3	Q99687	375 aa		11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932	API5	Q9BZZ5	524 aa	Known RBP	11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932	NKX2-4	Q9H2Z4	354 aa		11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932	EPHX3	Q9H6B9	360 aa		11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932	SMC4	Q9NTJ3	1288 aa		11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932	FAM184B	Q9ULE4	1060 aa		11.22	□□□□□ -0.61
TOM1L1-223	ENST00000576932		A0A0U1RQG5	324 aa	Predicted RBP	11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932		A0A1W2PRG0	241 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	ARVCF	O00192	962 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	DUSP11	O75319	330 aa	Known RBP	11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	FLOT1	O75955	427 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	DXO	O77932	396 aa	Known RBP	11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	FGB	P02675	491 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	CYP7A1	P22680	504 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	MMP16	P51512	607 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	DYNLL1	P63167	89 aa	Known RBP	11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	TFF2	Q03403	129 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	CTDSPL2	Q05D32	466 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	GABPA	Q06546	454 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	KCTD2	Q14681	263 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	SEPT2	Q15019	361 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	KCNA10	Q16322	511 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	TTC39A	Q5SRH9	613 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	RIOX2	Q8IUF8	465 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	FAM126B	Q8IXS8	530 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	ARMC2	Q8NEN0	867 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	ADAMTS5	Q9UNA0	930 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	YBX2	Q9Y2T7	364 aa	Known RBP	11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	PCDHA11	Q9Y5I1	949 aa		11.21	□□□□□ -0.61
TOM1L1-223	ENST00000576932	WDR46	O15213	610 aa	Known RBP	11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	TLL1	O43897	1013 aa		11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	TAL1	P17542	331 aa	Predicted RBP	11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	KCNQ1	P51787	676 aa		11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	NKX3-2	P78367	333 aa		11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	TMEM132B	Q14DG7	1078 aa		11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	MAMDC4	Q6UXC1	1216 aa		11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	TMEM179	Q6ZVK1	233 aa		11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	ZNF516	Q92618	1163 aa		11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	ATG4C	Q96DT6	458 aa		11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	SEZ6L	Q9BYH1	1024 aa		11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	SH2D4A	Q9H788	454 aa		11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	SPC25	Q9HBM1	224 aa		11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	SNRK	Q9NRH2	765 aa		11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	GBF1	Q92538	1859 aa		11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	PARP14	Q460N5	1801 aa		11.2	□□□□□ -0.62
TOM1L1-223	ENST00000576932	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.19	□□□□□ -0.62
TOM1L1-223	ENST00000576932	CD4	P01730	458 aa		11.19	□□□□□ -0.62
TOM1L1-223	ENST00000576932	PGK2	P07205	417 aa		11.19	□□□□□ -0.62
TOM1L1-223	ENST00000576932	CT47B1	P0C2W7	299 aa	Predicted RBP	11.19	□□□□□ -0.62
TOM1L1-223	ENST00000576932	CCNYL3	P0C7X3	344 aa		11.19	□□□□□ -0.62
TOM1L1-223	ENST00000576932	ACR	P10323	421 aa		11.19	□□□□□ -0.62
TOM1L1-223	ENST00000576932	CTH	P32929	405 aa		11.19	□□□□□ -0.62
TOM1L1-223	ENST00000576932	PLCD1	P51178	756 aa		11.19	□□□□□ -0.62
TOM1L1-223	ENST00000576932	LENG1	Q96BZ8	264 aa	Predicted RBP	11.19	□□□□□ -0.62
TOM1L1-223	ENST00000576932	PPP1R12C	Q9BZL4	782 aa		11.19	□□□□□ -0.62
TOM1L1-223	ENST00000576932	UPF3A	Q9H1J1	476 aa	Known RBP	11.19	□□□□□ -0.62
TOM1L1-223	ENST00000576932	VCPKMT	Q9H867	229 aa		11.19	□□□□□ -0.62
TOM1L1-223	ENST00000576932	ARHGEF10L	Q9HCE6	1279 aa		11.19	□□□□□ -0.62
TOM1L1-223	ENST00000576932	C11orf16	Q9NQ32	467 aa		11.19	□□□□□ -0.62
TOM1L1-223	ENST00000576932	TMX2	Q9Y320	296 aa		11.19	□□□□□ -0.62
TOM1L1-223	ENST00000576932	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.19	□□□□□ -0.62

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