RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 RPS12P25398 132 aaKnown RBP9.4□□□□□ -0.91
NCBP3-205ENST00000575815 FKBP15Q5T1M5 1219 aa9.4□□□□□ -0.91
NCBP3-205ENST00000575815 PPP4R3AQ6IN85 833 aa9.4□□□□□ -0.91
NCBP3-205ENST00000575815 VTI1AQ96AJ9 217 aa9.4□□□□□ -0.91
NCBP3-205ENST00000575815 RPAP3Q9H6T3 665 aaPredicted RBP9.4□□□□□ -0.91
NCBP3-205ENST00000575815 POTEMA6NI47 508 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 KIF20AO95235 890 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 FOSP01100 380 aaPredicted RBP9.39□□□□□ -0.91
NCBP3-205ENST00000575815 RCAN1P53805 252 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 MYL5Q02045 173 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 PABPC4Q13310 644 aaKnown RBP eCLIP9.39□□□□□ -0.91
NCBP3-205ENST00000575815 NTRK3Q16288 839 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 USP49Q70CQ1 688 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 CACNA2D4Q7Z3S7 1137 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 PRPF38AQ8NAV1 312 aaKnown RBP9.39□□□□□ -0.91
NCBP3-205ENST00000575815 GJA10Q969M2 543 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 NAP1L4Q99733 375 aaKnown RBP9.39□□□□□ -0.91
NCBP3-205ENST00000575815 AGXT2Q9BYV1 514 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 NYAP2Q9P242 653 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 PRR12Q9ULL5 1215 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 GAKO14976 1311 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 MYH14Q7Z406 1995 aaKnown RBP9.39□□□□□ -0.91
NCBP3-205ENST00000575815 A0A1W2PQ27 194 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 A0A1W2PQ64 194 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 A0A1W2PQD8 194 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 ARHGEF35A5YM69 484 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 TRAF5O00463 557 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 NOP56O00567 594 aaKnown RBP9.39□□□□□ -0.91
NCBP3-205ENST00000575815 PPP6R2O75170 966 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 TRAPPC10P48553 1259 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 UVSSAQ2YD98 709 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 SNRNP48Q6IEG0 339 aaKnown RBP9.39□□□□□ -0.91
NCBP3-205ENST00000575815 FAM160B2Q86V87 743 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 CEP89Q96ST8 783 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 SLF1Q9BQI6 1058 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 VPS16Q9H269 839 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 PDCL3Q9H2J4 239 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 JMJD4Q9H9V9 463 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 FAM217BQ9NTX9 383 aaPredicted RBP9.39□□□□□ -0.91
NCBP3-205ENST00000575815 MAD2L2Q9UI95 211 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 ABT1Q9ULW3 272 aaKnown RBP9.39□□□□□ -0.91
NCBP3-205ENST00000575815 CNTNAP5Q8WYK1 1306 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 MARF1Q9Y4F3 1742 aaKnown RBP9.39□□□□□ -0.91
NCBP3-205ENST00000575815 CCDC169A6NNP5 214 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 B4DLN1 442 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 LRCH2Q5VUJ6 765 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 MAP1SQ66K74 1059 aaPredicted RBP9.39□□□□□ -0.91
NCBP3-205ENST00000575815 MCF2L2Q86YR7 1114 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 TMX1Q9H3N1 280 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 GOLPH3LQ9H4A5 285 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 PCDHA6Q9UN73 950 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 PCDHA8Q9Y5H6 950 aa9.39□□□□□ -0.91
NCBP3-205ENST00000575815 PLCH1Q4KWH8 1693 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 GRIN3BO60391 1043 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 IGSF3O75054 1194 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 CAP2P40123 477 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 PTPN21Q16825 1174 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 DPCR1Q3MIW9 517 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 SEPT14Q6ZU15 432 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 LDHDQ86WU2 507 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 CDAN1Q8IWY9 1227 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 SPZ1Q9BXG8 430 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 VCPKMTQ9H867 229 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 SRPRBQ9Y5M8 271 aaKnown RBP9.38□□□□□ -0.91
NCBP3-205ENST00000575815 IQCA1LA6NCM1 817 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 PTPREP23469 700 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 MIER3Q7Z3K6 550 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 ZSCAN30Q86W11 494 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 CCDC65Q8IXS2 484 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 PKD1L3Q7Z443 1732 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 HARSP12081 509 aaKnown RBP9.38□□□□□ -0.91
NCBP3-205ENST00000575815 USP8P40818 1118 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 SPDYE2Q495Y8 402 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 GLG1Q92896 1179 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 ZNF577Q9BSK1 485 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 SLC39A2Q9NP94 309 aa9.38□□□□□ -0.91
NCBP3-205ENST00000575815 FGFR1OPO95684 399 aaKnown RBP9.37□□□□□ -0.91
NCBP3-205ENST00000575815 TRIM21P19474 475 aaKnown RBP9.37□□□□□ -0.91
NCBP3-205ENST00000575815 NLRP12P59046 1061 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 ARHGAP4P98171 946 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 GRIN1Q05586 938 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 CEP135Q66GS9 1140 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 GPBP1Q86WP2 473 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 POTEDQ86YR6 584 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 ZNF280CQ8ND82 737 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 RMDN3Q96TC7 470 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 PHF20Q9BVI0 1012 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 ASTN2O75129 1339 aaPredicted RBP9.37□□□□□ -0.91
NCBP3-205ENST00000575815 PALM3A6NDB9 673 aaPredicted RBP9.37□□□□□ -0.91
NCBP3-205ENST00000575815 PTGS1P23219 599 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 NT5C2P49902 561 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 KCTD2Q14681 263 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 RNF207Q6ZRF8 634 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 MYCT1Q8N699 235 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 AGBL1Q96MI9 1066 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 IDI2Q9BXS1 227 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 RNF146Q9NTX7 359 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 TACC3Q9Y6A5 838 aa9.37□□□□□ -0.91
NCBP3-205ENST00000575815 KLRG2A4D1S0 409 aaPredicted RBP9.37□□□□□ -0.91
NCBP3-205ENST00000575815 ADM5C9JUS6 153 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms