RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 TTLL1O95922 423 aa11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 MYOGP15173 224 aa11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 SMPD1P17405 629 aa11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 POU3F3P20264 500 aaPredicted RBP11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 PTGS1P23219 599 aa11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 IQSEC1Q6DN90 963 aa11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 TAPT1Q6NXT6 567 aa11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 NOL8Q76FK4 1167 aaKnown RBP11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 TLK2Q86UE8 772 aa11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 RPUSD2Q8IZ73 545 aaKnown RBP11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 OSBP2Q969R2 916 aa11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 AGBL1Q96MI9 1066 aa11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 TSPYL2Q9H2G4 693 aaPredicted RBP11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 ACAD9Q9H845 621 aa11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 HOMER2Q9NSB8 354 aa11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 Q9Y3F1 56 aa11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 SLC4A7Q9Y6M7 1214 aa11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 MCM3APO60318 1980 aa11.9□□□□□ -0.5
CALCOCO2-227ENST00000575560 TMEM232C9JQI7 657 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 ZEB2O60315 1214 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 PRDM1O75626 825 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 MS4A1P11836 297 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 BMP3P12645 472 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 TFF2Q03403 129 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 TKFCQ3LXA3 575 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 TMEM63BQ5T3F8 832 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 PPP2R2DQ66LE6 453 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 SLFN13Q68D06 897 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 LRRC47Q8N1G4 583 aaKnown RBP11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 KBTBD3Q8NAB2 608 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 IL27Q8NEV9 243 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 NEDD1Q8NHV4 660 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 CHURC1Q8WUH1 139 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 NECAB3Q96P71 396 aaPredicted RBP11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 AP5M1Q9H0R1 490 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 ZNF287Q9HBT7 754 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 EPB41L4AQ9HCS5 686 aaPredicted RBP11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 PDGFCQ9NRA1 345 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 DDX19BQ9UMR2 479 aa11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 DDX49Q9Y6V7 483 aaKnown RBP11.89□□□□□ -0.51
CALCOCO2-227ENST00000575560 PATL2C9JE40 543 aaKnown RBP11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 ERC2O15083 957 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 PLA2G6O60733 806 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 STAT2P52630 851 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 PSMC6P62333 389 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 HNRNPUQ00839 825 aaKnown RBP eCLIP11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 AAK1Q2M2I8 961 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 FAM160B2Q86V87 743 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 MORC4Q8TE76 937 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 STAG1Q8WVM7 1258 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 APPBP2Q92624 585 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 FAM122AQ96E09 287 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 SCLYQ96I15 445 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 GMCL1Q96IK5 515 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 TRERF1Q96PN7 1200 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 C1QTNF1Q9BXJ1 281 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 LRRCC1Q9C099 1032 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 ALDH8A1Q9H2A2 487 aaPredicted RBP11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 RNF146Q9NTX7 359 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 COG6Q9Y2V7 657 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 MTCH2Q9Y6C9 303 aa11.88□□□□□ -0.51
CALCOCO2-227ENST00000575560 RNF113AO15541 343 aaKnown RBP11.87□□□□□ -0.51
CALCOCO2-227ENST00000575560 GPAA1O43292 621 aa11.87□□□□□ -0.51
CALCOCO2-227ENST00000575560 PFKMP08237 780 aa11.87□□□□□ -0.51
CALCOCO2-227ENST00000575560 ATP2A2P16615 1042 aaKnown RBP11.87□□□□□ -0.51
CALCOCO2-227ENST00000575560 GNAT2P19087 354 aa11.87□□□□□ -0.51
CALCOCO2-227ENST00000575560 KCNQ1P51787 676 aa11.87□□□□□ -0.51
CALCOCO2-227ENST00000575560 TTLL4Q14679 1199 aa11.87□□□□□ -0.51
CALCOCO2-227ENST00000575560 ECHDC1Q9NTX5 307 aa11.87□□□□□ -0.51
CALCOCO2-227ENST00000575560 CYP39A1Q9NYL5 469 aa11.87□□□□□ -0.51
CALCOCO2-227ENST00000575560 PLIN4Q96Q06 1357 aa11.87□□□□□ -0.51
CALCOCO2-227ENST00000575560 GBF1Q92538 1859 aa11.87□□□□□ -0.51
CALCOCO2-227ENST00000575560 MYH7P12883 1935 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 M0R2C6 588 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 RFXAPO00287 272 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 SMARCA5O60264 1052 aaPredicted RBP11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 ZFYP08048 801 aaPredicted RBP11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 TSPY3P0CV98 308 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 TSPY8P0CW00 308 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 ALAS1P13196 640 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 MCCP23508 829 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 TDO2P48775 406 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 TFAP4Q01664 338 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 DUSP28Q4G0W2 176 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 MUM1L1Q5H9M0 696 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 TMEM67Q5HYA8 995 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 RCSD1Q6JBY9 416 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 EEPD1Q7L9B9 569 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 FBXO16Q8IX29 292 aaPredicted RBP11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 IFNL3Q8IZI9 196 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 MICALL1Q8N3F8 863 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 PURBQ96QR8 312 aaKnown RBP11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 VTA1Q9NP79 307 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 TRMT13Q9NUP7 481 aaKnown RBP11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 ARIH1Q9Y4X5 557 aaPredicted RBP11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 MYH4Q9Y623 1939 aa11.86□□□□□ -0.51
CALCOCO2-227ENST00000575560 PRRC2BQ5JSZ5 2229 aaKnown RBP11.85□□□□□ -0.51
CALCOCO2-227ENST00000575560 ZBBXA8MT70 800 aa11.85□□□□□ -0.51
CALCOCO2-227ENST00000575560 APPP05067 770 aa11.85□□□□□ -0.51
CALCOCO2-227ENST00000575560 CA3P07451 260 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms