RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 ASPSCR1Q9BZE9 553 aa6.29□□□□□ -1.4
TSR1-203ENST00000575049 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.29□□□□□ -1.4
TSR1-203ENST00000575049 CASS4Q9NQ75 786 aa6.29□□□□□ -1.4
TSR1-203ENST00000575049 SEMA3GQ9NS98 782 aa6.29□□□□□ -1.4
TSR1-203ENST00000575049 ZIM2Q9NZV7 527 aa6.29□□□□□ -1.4
TSR1-203ENST00000575049 IRS4O14654 1257 aaPredicted RBP6.28□□□□□ -1.4
TSR1-203ENST00000575049 AKAP10O43572 662 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 PDE8AO60658 829 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 LRRN2O75325 713 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 ACRP10323 421 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 CD53P19397 219 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 RNF4P78317 190 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 POU5F1BQ06416 359 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 C10orf62Q5T681 223 aaPredicted RBP6.28□□□□□ -1.4
TSR1-203ENST00000575049 INTS3Q68E01 1043 aaKnown RBP6.28□□□□□ -1.4
TSR1-203ENST00000575049 KSR2Q6VAB6 950 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 RUFY4Q6ZNE9 571 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 RNF180Q86T96 592 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 TP53INP2Q8IXH6 220 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 AMOTL1Q8IY63 956 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 ZSWIM2Q8NEG5 633 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 OR6P1Q8NGX9 317 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 PPM1EQ8WY54 764 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 MTA3Q9BTC8 594 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 SWAP70Q9UH65 585 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 KCNH3Q9ULD8 1083 aa6.28□□□□□ -1.4
TSR1-203ENST00000575049 FAM86C2PA6NEL3 165 aa6.27□□□□□ -1.41
TSR1-203ENST00000575049 NRDCO43847 1150 aa6.27□□□□□ -1.41
TSR1-203ENST00000575049 KATNA1O75449 491 aa6.27□□□□□ -1.41
TSR1-203ENST00000575049 CLEC3AO75596 197 aa6.27□□□□□ -1.41
TSR1-203ENST00000575049 FAM153BP0C7A2 387 aa6.27□□□□□ -1.41
TSR1-203ENST00000575049 GUCY2CP25092 1073 aa6.27□□□□□ -1.41
TSR1-203ENST00000575049 NEK2P51955 445 aa6.27□□□□□ -1.41
TSR1-203ENST00000575049 NBPF12Q5TAG4 269 aaPredicted RBP6.27□□□□□ -1.41
TSR1-203ENST00000575049 WDR78Q5VTH9 848 aa6.27□□□□□ -1.41
TSR1-203ENST00000575049 THAP5Q7Z6K1 395 aa6.27□□□□□ -1.41
TSR1-203ENST00000575049 TMEM192Q8IY95 271 aa6.27□□□□□ -1.41
TSR1-203ENST00000575049 AGBL5Q8NDL9 886 aa6.27□□□□□ -1.41
TSR1-203ENST00000575049 ATL2Q8NHH9 583 aa6.27□□□□□ -1.41
TSR1-203ENST00000575049 ZNF669Q96BR6 464 aaPredicted RBP6.27□□□□□ -1.41
TSR1-203ENST00000575049 SLC6A18Q96N87 628 aa6.27□□□□□ -1.41
TSR1-203ENST00000575049 OAS3Q9Y6K5 1087 aaKnown RBP6.27□□□□□ -1.41
TSR1-203ENST00000575049 CASP7P55210 303 aa6.26□□□□□ -1.41
TSR1-203ENST00000575049 LMOD3Q0VAK6 560 aa6.26□□□□□ -1.41
TSR1-203ENST00000575049 PABPC4Q13310 644 aaKnown RBP eCLIP6.26□□□□□ -1.41
TSR1-203ENST00000575049 IKZF1Q13422 519 aa6.26□□□□□ -1.41
TSR1-203ENST00000575049 CBX2Q14781 532 aaPredicted RBP6.26□□□□□ -1.41
TSR1-203ENST00000575049 TMEM67Q5HYA8 995 aa6.26□□□□□ -1.41
TSR1-203ENST00000575049 XP32Q5T750 250 aa6.26□□□□□ -1.41
TSR1-203ENST00000575049 ANGEL2Q5VTE6 544 aaKnown RBP6.26□□□□□ -1.41
TSR1-203ENST00000575049 SLC4A10Q6U841 1118 aa6.26□□□□□ -1.41
TSR1-203ENST00000575049 PCGF5Q86SE9 256 aa6.26□□□□□ -1.41
TSR1-203ENST00000575049 ABI1Q8IZP0 508 aa6.26□□□□□ -1.41
TSR1-203ENST00000575049 AFAP1L2Q8N4X5 818 aa6.26□□□□□ -1.41
TSR1-203ENST00000575049 ST13P5Q8NFI4 369 aaPredicted RBP6.26□□□□□ -1.41
TSR1-203ENST00000575049 UBE2FQ969M7 185 aa6.26□□□□□ -1.41
TSR1-203ENST00000575049 GPR62Q9BZJ7 368 aa6.26□□□□□ -1.41
TSR1-203ENST00000575049 DUSP15Q9H1R2 295 aaPredicted RBP6.26□□□□□ -1.41
TSR1-203ENST00000575049 ATP13A1Q9HD20 1204 aa6.26□□□□□ -1.41
TSR1-203ENST00000575049 MAP3K20Q9NYL2 800 aaKnown RBP6.26□□□□□ -1.41
TSR1-203ENST00000575049 ZSWIM5Q9P217 1185 aa6.26□□□□□ -1.41
TSR1-203ENST00000575049 INTUQ9ULD6 942 aa6.26□□□□□ -1.41
TSR1-203ENST00000575049 GSG1L2A8MUP6 293 aa6.25□□□□□ -1.41
TSR1-203ENST00000575049 B2RBV5 119 aa6.25□□□□□ -1.41
TSR1-203ENST00000575049 RFPL3O75679 317 aa6.25□□□□□ -1.41
TSR1-203ENST00000575049 DDAH1O94760 285 aa6.25□□□□□ -1.41
TSR1-203ENST00000575049 SRFP11831 508 aa6.25□□□□□ -1.41
TSR1-203ENST00000575049 FUT4P22083 530 aa6.25□□□□□ -1.41
TSR1-203ENST00000575049 PLCL1Q15111 1095 aa6.25□□□□□ -1.41
TSR1-203ENST00000575049 ZYXQ15942 572 aaKnown RBP6.25□□□□□ -1.41
TSR1-203ENST00000575049 UNC5AQ6ZN44 842 aa6.25□□□□□ -1.41
TSR1-203ENST00000575049 DHRS1Q96LJ7 313 aa6.25□□□□□ -1.41
TSR1-203ENST00000575049 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.25□□□□□ -1.41
TSR1-203ENST00000575049 CDH19Q9H159 772 aa6.25□□□□□ -1.41
TSR1-203ENST00000575049 TRIT1Q9H3H1 467 aaKnown RBP6.25□□□□□ -1.41
TSR1-203ENST00000575049 SUCOQ9UBS9 1254 aaKnown RBP6.25□□□□□ -1.41
TSR1-203ENST00000575049 MAPRE3Q9UPY8 281 aa6.25□□□□□ -1.41
TSR1-203ENST00000575049 WASH4PA8MWX3 477 aa6.24□□□□□ -1.41
TSR1-203ENST00000575049 EYA4O95677 639 aa6.24□□□□□ -1.41
TSR1-203ENST00000575049 PTMSP20962 102 aa6.24□□□□□ -1.41
TSR1-203ENST00000575049 RAPGEF1Q13905 1077 aa6.24□□□□□ -1.41
TSR1-203ENST00000575049 NBPF9Q3BBW0 867 aa6.24□□□□□ -1.41
TSR1-203ENST00000575049 INO80DQ53TQ3 878 aaPredicted RBP6.24□□□□□ -1.41
TSR1-203ENST00000575049 WWC2Q6AWC2 1192 aa6.24□□□□□ -1.41
TSR1-203ENST00000575049 TCEAL8Q8IYN2 117 aa6.24□□□□□ -1.41
TSR1-203ENST00000575049 C19orf47Q8N9M1 422 aaKnown RBP6.24□□□□□ -1.41
TSR1-203ENST00000575049 TMX4Q9H1E5 349 aaPredicted RBP6.24□□□□□ -1.41
TSR1-203ENST00000575049 GPATCH2Q9NW75 528 aa6.24□□□□□ -1.41
TSR1-203ENST00000575049 ANAPC4Q9UJX5 808 aa6.24□□□□□ -1.41
TSR1-203ENST00000575049 SHISA3A0PJX4 238 aa6.23□□□□□ -1.41
TSR1-203ENST00000575049 EXOC5O00471 708 aa6.23□□□□□ -1.41
TSR1-203ENST00000575049 TBX3O15119 743 aa6.23□□□□□ -1.41
TSR1-203ENST00000575049 TPP2P29144 1249 aaPredicted RBP6.23□□□□□ -1.41
TSR1-203ENST00000575049 PMS1P54277 932 aaKnown RBP6.23□□□□□ -1.41
TSR1-203ENST00000575049 ZP2Q05996 745 aa6.23□□□□□ -1.41
TSR1-203ENST00000575049 MORC3Q14149 939 aa6.23□□□□□ -1.41
TSR1-203ENST00000575049 MLC1Q15049 377 aa6.23□□□□□ -1.41
TSR1-203ENST00000575049 PPP2R5EQ16537 467 aa6.23□□□□□ -1.41
TSR1-203ENST00000575049 LONRF2Q1L5Z9 754 aa6.23□□□□□ -1.41
TSR1-203ENST00000575049 GAB4Q2WGN9 574 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms