RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 C21orf2O43822 256 aa26.68■■□□□ 1.86
NPLOC4-217ENST00000574897 GDF11O95390 407 aa26.68■■□□□ 1.86
NPLOC4-217ENST00000574897 CERKLQ49MI3 558 aaPredicted RBP26.68■■□□□ 1.86
NPLOC4-217ENST00000574897 KMT5BQ4FZB7 885 aa26.68■■□□□ 1.86
NPLOC4-217ENST00000574897 ZNF713Q8N859 430 aaPredicted RBP26.68■■□□□ 1.86
NPLOC4-217ENST00000574897 TRIM49BA6NDI0 452 aa26.67■■□□□ 1.86
NPLOC4-217ENST00000574897 TNNI2P48788 182 aa26.67■■□□□ 1.86
NPLOC4-217ENST00000574897 FKBP1AP62942 108 aaKnown RBP26.67■■□□□ 1.86
NPLOC4-217ENST00000574897 PAK1Q13153 545 aa26.67■■□□□ 1.86
NPLOC4-217ENST00000574897 SEPT2Q15019 361 aa26.67■■□□□ 1.86
NPLOC4-217ENST00000574897 PI4KBQ9UBF8 816 aa26.67■■□□□ 1.86
NPLOC4-217ENST00000574897 PSDA5PKW4 1024 aaPredicted RBP26.66■■□□□ 1.86
NPLOC4-217ENST00000574897 NRDCO43847 1150 aa26.66■■□□□ 1.86
NPLOC4-217ENST00000574897 CCT6AP40227 531 aaKnown RBP26.66■■□□□ 1.86
NPLOC4-217ENST00000574897 CCDC17Q96LX7 622 aa26.66■■□□□ 1.86
NPLOC4-217ENST00000574897 MRIQ9BWK5 157 aa26.66■■□□□ 1.86
NPLOC4-217ENST00000574897 RWDD2AQ9UIY3 292 aa26.66■■□□□ 1.86
NPLOC4-217ENST00000574897 DHX8Q14562 1220 aaKnown RBP26.66■■□□□ 1.86
NPLOC4-217ENST00000574897 SIAH1Q8IUQ4 282 aa26.66■■□□□ 1.86
NPLOC4-217ENST00000574897 DHX36Q9H2U1 1008 aaKnown RBP26.66■■□□□ 1.86
NPLOC4-217ENST00000574897 RMND1Q9NWS8 449 aa26.66■■□□□ 1.86
NPLOC4-217ENST00000574897 KCNJ6P48051 423 aa26.65■■□□□ 1.86
NPLOC4-217ENST00000574897 JAG1P78504 1218 aa26.65■■□□□ 1.86
NPLOC4-217ENST00000574897 HDLBPQ00341 1268 aaKnown RBP26.65■■□□□ 1.86
NPLOC4-217ENST00000574897 GPATCH4Q5T3I0 446 aaKnown RBP26.65■■□□□ 1.86
NPLOC4-217ENST00000574897 CCDC112Q8NEF3 446 aa26.65■■□□□ 1.86
NPLOC4-217ENST00000574897 PRMT6Q96LA8 375 aaPredicted RBP26.65■■□□□ 1.86
NPLOC4-217ENST00000574897 CAMKK2Q96RR4 588 aa26.65■■□□□ 1.86
NPLOC4-217ENST00000574897 SERPINA10Q9UK55 444 aa26.65■■□□□ 1.86
NPLOC4-217ENST00000574897 PAXBP1Q9Y5B6 917 aa26.65■■□□□ 1.86
NPLOC4-217ENST00000574897 PPIP5K2O43314 1243 aa26.65■■□□□ 1.86
NPLOC4-217ENST00000574897 PMS1P54277 932 aaKnown RBP26.65■■□□□ 1.86
NPLOC4-217ENST00000574897 AK8Q96MA6 479 aa26.65■■□□□ 1.86
NPLOC4-217ENST00000574897 MTMR9Q96QG7 549 aa26.65■■□□□ 1.86
NPLOC4-217ENST00000574897 RIC8AQ9NPQ8 531 aa26.65■■□□□ 1.86
NPLOC4-217ENST00000574897 ZBTB5O15062 677 aa26.64■■□□□ 1.86
NPLOC4-217ENST00000574897 CALCRLQ16602 461 aa26.64■■□□□ 1.86
NPLOC4-217ENST00000574897 CREBRFQ8IUR6 639 aa26.64■■□□□ 1.86
NPLOC4-217ENST00000574897 GJA10Q969M2 543 aa26.64■■□□□ 1.86
NPLOC4-217ENST00000574897 RGS17Q9UGC6 210 aaPredicted RBP26.64■■□□□ 1.86
NPLOC4-217ENST00000574897 KRT31Q15323 416 aa26.64■■□□□ 1.85
NPLOC4-217ENST00000574897 IGSF22Q8N9C0 903 aa26.64■■□□□ 1.85
NPLOC4-217ENST00000574897 STK32BQ9NY57 414 aa26.64■■□□□ 1.85
NPLOC4-217ENST00000574897 SMCHD1A6NHR9 2005 aa26.64■■□□□ 1.85
NPLOC4-217ENST00000574897 HSP90AA2PQ14568 343 aaPredicted RBP26.63■■□□□ 1.85
NPLOC4-217ENST00000574897 MTMR8Q96EF0 704 aa26.63■■□□□ 1.85
NPLOC4-217ENST00000574897 BAG1Q99933 345 aaPredicted RBP26.63■■□□□ 1.85
NPLOC4-217ENST00000574897 TRIM34Q9BYJ4 488 aa26.63■■□□□ 1.85
NPLOC4-217ENST00000574897 PSME4Q14997 1843 aa26.63■■□□□ 1.85
NPLOC4-217ENST00000574897 POTEMA6NI47 508 aa26.63■■□□□ 1.85
NPLOC4-217ENST00000574897 PBX1P40424 430 aa26.63■■□□□ 1.85
NPLOC4-217ENST00000574897 SNAP25P60880 206 aa26.63■■□□□ 1.85
NPLOC4-217ENST00000574897 NAA30Q147X3 362 aaPredicted RBP26.63■■□□□ 1.85
NPLOC4-217ENST00000574897 POTEAQ6S8J7 498 aa26.63■■□□□ 1.85
NPLOC4-217ENST00000574897 ADSSL1Q8N142 457 aa26.63■■□□□ 1.85
NPLOC4-217ENST00000574897 CPLX3Q8WVH0 158 aa26.63■■□□□ 1.85
NPLOC4-217ENST00000574897 UIMC1Q96RL1 719 aa26.63■■□□□ 1.85
NPLOC4-217ENST00000574897 NUP88Q99567 741 aaPredicted RBP26.63■■□□□ 1.85
NPLOC4-217ENST00000574897 CTIFO43310 598 aaKnown RBP26.62■■□□□ 1.85
NPLOC4-217ENST00000574897 SLC1A4P43007 532 aa26.62■■□□□ 1.85
NPLOC4-217ENST00000574897 CLK2P49760 499 aaKnown RBP26.62■■□□□ 1.85
NPLOC4-217ENST00000574897 SLFN13Q68D06 897 aa26.62■■□□□ 1.85
NPLOC4-217ENST00000574897 TATDN1Q6P1N9 297 aa26.62■■□□□ 1.85
NPLOC4-217ENST00000574897 VPS16Q9H269 839 aa26.62■■□□□ 1.85
NPLOC4-217ENST00000574897 RRP1BQ14684 758 aaKnown RBP26.62■■□□□ 1.85
NPLOC4-217ENST00000574897 QRICH1Q2TAL8 776 aa26.62■■□□□ 1.85
NPLOC4-217ENST00000574897 TAB2Q9NYJ8 693 aa26.62■■□□□ 1.85
NPLOC4-217ENST00000574897 ICA1Q05084 483 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 SYT10Q6XYQ8 523 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 TRIM9Q9C026 710 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 KANSL2Q9H9L4 492 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 USP17L15C9J2P7 530 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 USP17L13C9JLJ4 530 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 USP17L11C9JVI0 530 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 USP17L18D6R9N7 530 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 USP17L22D6RA61 530 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 USP17L17D6RBQ6 530 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 USP17L19D6RCP7 530 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 USP17L20D6RJB6 530 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 RBL2Q08999 1139 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 USP17L24Q0WX57 530 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 KCNB1Q14721 858 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 USP17L6PQ6QN14 398 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 CUL5Q93034 780 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 NUDT12Q9BQG2 462 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 NYAP2Q9P242 653 aa26.61■■□□□ 1.85
NPLOC4-217ENST00000574897 RHOBTB3O94955 611 aa26.6■■□□□ 1.85
NPLOC4-217ENST00000574897 GRB10Q13322 594 aa26.6■■□□□ 1.85
NPLOC4-217ENST00000574897 PPP1R18Q6NYC8 613 aa26.6■■□□□ 1.85
NPLOC4-217ENST00000574897 REXO1L1PQ8IX06 675 aa26.6■■□□□ 1.85
NPLOC4-217ENST00000574897 MKL1Q969V6 931 aa26.6■■□□□ 1.85
NPLOC4-217ENST00000574897 LRWD1Q9UFC0 647 aa26.6■■□□□ 1.85
NPLOC4-217ENST00000574897 LIMA1Q9UHB6 759 aaKnown RBP26.6■■□□□ 1.85
NPLOC4-217ENST00000574897 TAL1P17542 331 aaPredicted RBP26.6■■□□□ 1.85
NPLOC4-217ENST00000574897 TOGARAM2Q6ZUX3 1019 aa26.6■■□□□ 1.85
NPLOC4-217ENST00000574897 IRF2BP1Q8IU81 584 aa26.6■■□□□ 1.85
NPLOC4-217ENST00000574897 HPS3Q969F9 1004 aa26.6■■□□□ 1.85
NPLOC4-217ENST00000574897 PSTPIP2Q9H939 334 aa26.6■■□□□ 1.85
NPLOC4-217ENST00000574897 COL4A5P29400 1685 aa26.59■■□□□ 1.85
NPLOC4-217ENST00000574897 KCNJ18B7U540 433 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms