RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 MSL3Q8N5Y2 521 aaKnown RBP13.3□□□□□ -0.28
RPAIN-214ENST00000574003 ENAHQ8N8S7 591 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-214ENST00000574003 PNMA1Q8ND90 353 aa13.3□□□□□ -0.28
RPAIN-214ENST00000574003 CLEC4DQ8WXI8 215 aa13.3□□□□□ -0.28
RPAIN-214ENST00000574003 ZSCAN10Q96SZ4 725 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-214ENST00000574003 UBE2OQ9C0C9 1292 aaKnown RBP13.3□□□□□ -0.28
RPAIN-214ENST00000574003 PRDM5Q9NQX1 630 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-214ENST00000574003 PDGFCQ9NRA1 345 aa13.3□□□□□ -0.28
RPAIN-214ENST00000574003 A0A1W2PQ45 241 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-214ENST00000574003 A0A1W2PQY0 241 aa13.29□□□□□ -0.28
RPAIN-214ENST00000574003 BMP8BP34820 402 aa13.29□□□□□ -0.28
RPAIN-214ENST00000574003 BEX3Q00994 111 aa13.29□□□□□ -0.28
RPAIN-214ENST00000574003 TLE2Q04725 743 aa13.29□□□□□ -0.28
RPAIN-214ENST00000574003 KCNA10Q16322 511 aa13.29□□□□□ -0.28
RPAIN-214ENST00000574003 USH1GQ495M9 461 aa13.29□□□□□ -0.28
RPAIN-214ENST00000574003 SLC30A10Q6XR72 485 aa13.29□□□□□ -0.28
RPAIN-214ENST00000574003 RNF180Q86T96 592 aa13.29□□□□□ -0.28
RPAIN-214ENST00000574003 FBXO16Q8IX29 292 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-214ENST00000574003 KLHDC9Q8NEP7 349 aa13.29□□□□□ -0.28
RPAIN-214ENST00000574003 SENP2Q9HC62 589 aa13.29□□□□□ -0.28
RPAIN-214ENST00000574003 CTNNA3Q9UI47 895 aa13.29□□□□□ -0.28
RPAIN-214ENST00000574003 TNKSO95271 1327 aa13.29□□□□□ -0.28
RPAIN-214ENST00000574003 BAZ2BQ9UIF8 2168 aaKnown RBP13.28□□□□□ -0.28
RPAIN-214ENST00000574003 LRRC37A2A6NM11 1700 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 PTPDC1A2A3K4 754 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 TRIM43BA6NCK2 446 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 CTAGE5O15320 804 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 CYP21A2P08686 494 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 C6orf222P0C671 652 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-214ENST00000574003 ITGB8P26012 769 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 CALML3P27482 149 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 SNX17Q15036 470 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 CCSAPQ6IQ19 270 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-214ENST00000574003 STOX1Q6ZVD7 989 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 NOL8Q76FK4 1167 aaKnown RBP13.28□□□□□ -0.28
RPAIN-214ENST00000574003 IQCA1Q86XH1 822 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 DGKHQ86XP1 1220 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 TBC1D5Q92609 795 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 ANKS1AQ92625 1134 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 TRIM43Q96BQ3 446 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-214ENST00000574003 ABHD16BQ9H3Z7 469 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 KAT14Q9H8E8 782 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 VAT1LQ9HCJ6 419 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 PDLIM7Q9NR12 457 aa13.28□□□□□ -0.28
RPAIN-214ENST00000574003 SGSM2O43147 1006 aa13.27□□□□□ -0.29
RPAIN-214ENST00000574003 PQBP1O60828 265 aaKnown RBP13.27□□□□□ -0.29
RPAIN-214ENST00000574003 DUSP11O75319 330 aaKnown RBP13.27□□□□□ -0.29
RPAIN-214ENST00000574003 ACLYP53396 1101 aa13.27□□□□□ -0.29
RPAIN-214ENST00000574003 CHST3Q7LGC8 479 aa13.27□□□□□ -0.29
RPAIN-214ENST00000574003 STAG2Q8N3U4 1231 aa13.27□□□□□ -0.29
RPAIN-214ENST00000574003 KRT23Q9C075 422 aa13.27□□□□□ -0.29
RPAIN-214ENST00000574003 LTBP2Q14767 1821 aa13.27□□□□□ -0.29
RPAIN-214ENST00000574003 SMPD1P17405 629 aa13.26□□□□□ -0.29
RPAIN-214ENST00000574003 ALDH5A1P51649 535 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-214ENST00000574003 TNFAIP2Q03169 654 aa13.26□□□□□ -0.29
RPAIN-214ENST00000574003 COL9A3Q14050 684 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-214ENST00000574003 SEC23AQ15436 765 aa13.26□□□□□ -0.29
RPAIN-214ENST00000574003 CDC37Q16543 378 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-214ENST00000574003 SLC35G1Q2M3R5 365 aa13.26□□□□□ -0.29
RPAIN-214ENST00000574003 TAPT1Q6NXT6 567 aa13.26□□□□□ -0.29
RPAIN-214ENST00000574003 ADGRF4Q8IZF3 695 aa13.26□□□□□ -0.29
RPAIN-214ENST00000574003 TDHQ8IZJ6 230 aa13.26□□□□□ -0.29
RPAIN-214ENST00000574003 RUFY2Q8WXA3 655 aa13.26□□□□□ -0.29
RPAIN-214ENST00000574003 RAD50Q92878 1312 aa13.26□□□□□ -0.29
RPAIN-214ENST00000574003 BADQ92934 168 aa13.26□□□□□ -0.29
RPAIN-214ENST00000574003 LBHD1Q9BQE6 289 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-214ENST00000574003 UBAC1Q9BSL1 405 aa13.26□□□□□ -0.29
RPAIN-214ENST00000574003 UPF3AQ9H1J1 476 aaKnown RBP13.26□□□□□ -0.29
RPAIN-214ENST00000574003 STARD7Q9NQZ5 370 aa13.26□□□□□ -0.29
RPAIN-214ENST00000574003 A0A1W2PPC1 479 aa13.25□□□□□ -0.29
RPAIN-214ENST00000574003 ASB14A6NK59 587 aa13.25□□□□□ -0.29
RPAIN-214ENST00000574003 DYNC1LI2O43237 492 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-214ENST00000574003 DHX16O60231 1041 aaKnown RBP13.25□□□□□ -0.29
RPAIN-214ENST00000574003 ASGR1P07306 291 aa13.25□□□□□ -0.29
RPAIN-214ENST00000574003 PARP1P09874 1014 aaKnown RBP13.25□□□□□ -0.29
RPAIN-214ENST00000574003 GJA9P57773 515 aa13.25□□□□□ -0.29
RPAIN-214ENST00000574003 RPS6P62753 249 aaKnown RBP13.25□□□□□ -0.29
RPAIN-214ENST00000574003 GNASQ5JWF2 1037 aa13.25□□□□□ -0.29
RPAIN-214ENST00000574003 C9orf50Q5SZB4 431 aa13.25□□□□□ -0.29
RPAIN-214ENST00000574003 GPATCH4Q5T3I0 446 aaKnown RBP13.25□□□□□ -0.29
RPAIN-214ENST00000574003 IFIT1BQ5T764 474 aaKnown RBP13.25□□□□□ -0.29
RPAIN-214ENST00000574003 RNF207Q6ZRF8 634 aa13.25□□□□□ -0.29
RPAIN-214ENST00000574003 VTI1AQ96AJ9 217 aa13.25□□□□□ -0.29
RPAIN-214ENST00000574003 TSEN34Q9BSV6 310 aaKnown RBP13.25□□□□□ -0.29
RPAIN-214ENST00000574003 GPHNQ9NQX3 736 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-214ENST00000574003 PRKAG2Q9UGJ0 569 aa13.25□□□□□ -0.29
RPAIN-214ENST00000574003 GNEQ9Y223 722 aaKnown RBP13.25□□□□□ -0.29
RPAIN-214ENST00000574003 MYH6P13533 1939 aa13.25□□□□□ -0.29
RPAIN-214ENST00000574003 WDR19Q8NEZ3 1342 aa13.24□□□□□ -0.29
RPAIN-214ENST00000574003 E7EWF7 191 aa13.24□□□□□ -0.29
RPAIN-214ENST00000574003 CST5P28325 142 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-214ENST00000574003 QRICH1Q2TAL8 776 aa13.24□□□□□ -0.29
RPAIN-214ENST00000574003 CCDC178Q5BJE1 867 aa13.24□□□□□ -0.29
RPAIN-214ENST00000574003 CXCL17Q6UXB2 119 aa13.24□□□□□ -0.29
RPAIN-214ENST00000574003 KIAA1211Q6ZU35 1233 aa13.24□□□□□ -0.29
RPAIN-214ENST00000574003 Q7L0L9 218 aa13.24□□□□□ -0.29
RPAIN-214ENST00000574003 TLK2Q86UE8 772 aa13.24□□□□□ -0.29
RPAIN-214ENST00000574003 MORC4Q8TE76 937 aa13.24□□□□□ -0.29
RPAIN-214ENST00000574003 CNNM2Q9H8M5 875 aa13.24□□□□□ -0.29
RPAIN-214ENST00000574003 JMJD4Q9H9V9 463 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms