RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 CYP27A1Q02318 531 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 PDE4DQ08499 809 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 GRM4Q14833 912 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 CCDC47Q96A33 483 aaKnown RBP17.48■□□□□ 0.39
NUP88-207ENST00000573584 CNOT6LQ96LI5 555 aaKnown RBP17.48■□□□□ 0.39
NUP88-207ENST00000573584 MACROD2A1Z1Q3 448 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 RNF40O75150 1001 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 SYF2O95926 243 aaKnown RBP17.48■□□□□ 0.39
NUP88-207ENST00000573584 AARSP49588 968 aaKnown RBP eCLIP17.48■□□□□ 0.39
NUP88-207ENST00000573584 CCDC178Q5BJE1 867 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 GALNT17Q6IS24 598 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 BICDL1Q6ZP65 573 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 SRLQ86TD4 932 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 CABP7Q86V35 215 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 GOLGA6L1Q8N7Z2 621 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 NOC4LQ9BVI4 516 aaKnown RBP17.48■□□□□ 0.39
NUP88-207ENST00000573584 JADE2Q9NQC1 790 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 A0A1B0GUL6 1792 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 ZNF185O15231 689 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 RPS6KA5O75582 802 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 PRPHP41219 470 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 STK4Q13043 487 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 FAM114A1Q8IWE2 563 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 DAGLBQ8NCG7 672 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 DYNLL2Q96FJ2 89 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 GDAP1L1Q96MZ0 367 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 CUEDC2Q9H467 287 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 MKNK2Q9HBH9 465 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 BARHL2Q9NY43 387 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 HPCAL4Q9UM19 191 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 USP17L3A6NCW0 530 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 USP17L4A6NCW7 530 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 TRIM66O15016 1216 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 CYTH3O43739 400 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 IDEP14735 1019 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 RPS8P62241 208 aaKnown RBP17.47■□□□□ 0.39
NUP88-207ENST00000573584 KIF5AQ12840 1032 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 DDB1Q16531 1140 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 SLC35G1Q2M3R5 365 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 USP17L1Q7RTZ2 530 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 C10orf67Q8IYJ2 551 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 COG1Q8WTW3 980 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 TRIM9Q9C026 710 aa17.47■□□□□ 0.39
NUP88-207ENST00000573584 RRP15Q9Y3B9 282 aaKnown RBP17.47■□□□□ 0.39
NUP88-207ENST00000573584 ANO9A1A5B4 782 aa17.46■□□□□ 0.39
NUP88-207ENST00000573584 STXBP3O00186 592 aa17.46■□□□□ 0.39
NUP88-207ENST00000573584 ASIC1P78348 528 aa17.46■□□□□ 0.39
NUP88-207ENST00000573584 TXNRD1Q16881 649 aa17.46■□□□□ 0.39
NUP88-207ENST00000573584 C12orf60Q5U649 245 aa17.46■□□□□ 0.39
NUP88-207ENST00000573584 DZIP1Q86YF9 867 aaKnown RBP17.46■□□□□ 0.39
NUP88-207ENST00000573584 ANKS1AQ92625 1134 aa17.46■□□□□ 0.39
NUP88-207ENST00000573584 ZFP91Q96JP5 570 aaPredicted RBP17.46■□□□□ 0.39
NUP88-207ENST00000573584 RASSF4Q9H2L5 321 aa17.46■□□□□ 0.39
NUP88-207ENST00000573584 MAGEF1Q9HAY2 307 aa17.46■□□□□ 0.39
NUP88-207ENST00000573584 COL22A1Q8NFW1 1626 aaPredicted RBP17.46■□□□□ 0.39
NUP88-207ENST00000573584 NUTM2BA6NNL0 878 aaPredicted RBP17.46■□□□□ 0.39
NUP88-207ENST00000573584 NUTM2EB1AL46 878 aaPredicted RBP17.46■□□□□ 0.39
NUP88-207ENST00000573584 PDE2AO00408 941 aaPredicted RBP17.46■□□□□ 0.39
NUP88-207ENST00000573584 FOXR1Q6PIV2 292 aa17.46■□□□□ 0.39
NUP88-207ENST00000573584 CCDC42Q96M95 316 aa17.46■□□□□ 0.39
NUP88-207ENST00000573584 DOT1LQ8TEK3 1739 aa17.46■□□□□ 0.38
NUP88-207ENST00000573584 TAF1P21675 1872 aa17.46■□□□□ 0.38
NUP88-207ENST00000573584 FCER1AP12319 257 aa17.45■□□□□ 0.38
NUP88-207ENST00000573584 MIIPQ5JXC2 388 aa17.45■□□□□ 0.38
NUP88-207ENST00000573584 SECISBP2LQ93073 1101 aaKnown RBP17.45■□□□□ 0.38
NUP88-207ENST00000573584 AK8Q96MA6 479 aa17.45■□□□□ 0.38
NUP88-207ENST00000573584 LAMB2P55268 1798 aa17.45■□□□□ 0.38
NUP88-207ENST00000573584 FLT1P17948 1338 aa17.45■□□□□ 0.38
NUP88-207ENST00000573584 TSPY3P0CV98 308 aa17.45■□□□□ 0.38
NUP88-207ENST00000573584 TSPY8P0CW00 308 aa17.45■□□□□ 0.38
NUP88-207ENST00000573584 SPA17Q15506 151 aa17.45■□□□□ 0.38
NUP88-207ENST00000573584 PURBQ96QR8 312 aaKnown RBP17.45■□□□□ 0.38
NUP88-207ENST00000573584 CCNT1O60563 726 aaKnown RBP17.44■□□□□ 0.38
NUP88-207ENST00000573584 OR52Z1P0C646 297 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 VAV2P52735 878 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 LETM2Q2VYF4 491 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 FKBP15Q5T1M5 1219 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 CCNI2Q6ZMN8 369 aaPredicted RBP17.44■□□□□ 0.38
NUP88-207ENST00000573584 AFAP1L1Q8TED9 768 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 C7orf25Q9BPX7 421 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 STX8Q9UNK0 236 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 MYH14Q7Z406 1995 aaKnown RBP17.44■□□□□ 0.38
NUP88-207ENST00000573584 PRPF6O94906 941 aaKnown RBP17.44■□□□□ 0.38
NUP88-207ENST00000573584 CDK17Q00537 523 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 CCDC96Q2M329 555 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 IQCEQ6IPM2 695 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 TMED8Q6PL24 325 aaPredicted RBP17.44■□□□□ 0.38
NUP88-207ENST00000573584 LRRC31Q6UY01 552 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 ERGIC2Q96RQ1 377 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 CRACR2AQ9BSW2 395 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 TRIM34Q9BYJ4 488 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 TSGA10Q9BZW7 698 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 LRWD1Q9UFC0 647 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 MKRN1Q9UHC7 482 aaKnown RBP17.44■□□□□ 0.38
NUP88-207ENST00000573584 SCN7AQ01118 1682 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 A0A1W2PQJ5 194 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 GOLGA8HP0CJ92 632 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 FIGNQ5HY92 759 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 KRT26Q7Z3Y9 468 aa17.44■□□□□ 0.38
NUP88-207ENST00000573584 ZSCAN29Q8IWY8 852 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms