RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 ACAD9Q9H845 621 aa16.78■□□□□ 0.28
NPLOC4-209ENST00000572760 RIPK3Q9Y572 518 aa16.78■□□□□ 0.28
NPLOC4-209ENST00000572760 PCDHA1Q9Y5I3 950 aa16.78■□□□□ 0.28
NPLOC4-209ENST00000572760 RBBP6Q7Z6E9 1792 aaKnown RBP16.77■□□□□ 0.28
NPLOC4-209ENST00000572760 PRPF3O43395 683 aaKnown RBP16.77■□□□□ 0.28
NPLOC4-209ENST00000572760 PPFIA3O75145 1194 aa16.77■□□□□ 0.28
NPLOC4-209ENST00000572760 GNRH1P01148 92 aa16.77■□□□□ 0.28
NPLOC4-209ENST00000572760 FCER1AP12319 257 aa16.77■□□□□ 0.28
NPLOC4-209ENST00000572760 TAL1P17542 331 aaPredicted RBP16.77■□□□□ 0.28
NPLOC4-209ENST00000572760 KCTD2Q14681 263 aa16.77■□□□□ 0.28
NPLOC4-209ENST00000572760 CCDC83Q8IWF9 413 aa16.77■□□□□ 0.28
NPLOC4-209ENST00000572760 ANKRD35Q8N283 1001 aa16.77■□□□□ 0.28
NPLOC4-209ENST00000572760 DDX11Q96FC9 970 aa16.77■□□□□ 0.28
NPLOC4-209ENST00000572760 TRIM47Q96LD4 638 aa16.77■□□□□ 0.28
NPLOC4-209ENST00000572760 MMP19Q99542 508 aa16.77■□□□□ 0.28
NPLOC4-209ENST00000572760 RNF26Q9BY78 433 aaPredicted RBP16.77■□□□□ 0.28
NPLOC4-209ENST00000572760 MRPL11Q9Y3B7 192 aaKnown RBP16.77■□□□□ 0.28
NPLOC4-209ENST00000572760 TRIM17Q9Y577 477 aa16.77■□□□□ 0.28
NPLOC4-209ENST00000572760 STRNO43815 780 aa16.76■□□□□ 0.27
NPLOC4-209ENST00000572760 FUT2Q10981 343 aa16.76■□□□□ 0.27
NPLOC4-209ENST00000572760 NTRK3Q16288 839 aa16.76■□□□□ 0.27
NPLOC4-209ENST00000572760 NSMFQ6X4W1 530 aa16.76■□□□□ 0.27
NPLOC4-209ENST00000572760 HEATR3Q7Z4Q2 680 aa16.76■□□□□ 0.27
NPLOC4-209ENST00000572760 NUDT12Q9BQG2 462 aa16.76■□□□□ 0.27
NPLOC4-209ENST00000572760 SLC15A5A6NIM6 579 aa16.75■□□□□ 0.27
NPLOC4-209ENST00000572760 CD2BP2O95400 341 aaKnown RBP16.75■□□□□ 0.27
NPLOC4-209ENST00000572760 PTPREP23469 700 aa16.75■□□□□ 0.27
NPLOC4-209ENST00000572760 CTGFP29279 349 aa16.75■□□□□ 0.27
NPLOC4-209ENST00000572760 MUM1L1Q5H9M0 696 aa16.75■□□□□ 0.27
NPLOC4-209ENST00000572760 DPP9Q86TI2 863 aa16.75■□□□□ 0.27
NPLOC4-209ENST00000572760 TMX3Q96JJ7 454 aa16.75■□□□□ 0.27
NPLOC4-209ENST00000572760 PRDM10Q9NQV6 1147 aa16.75■□□□□ 0.27
NPLOC4-209ENST00000572760 PPP1R11O60927 126 aaPredicted RBP16.74■□□□□ 0.27
NPLOC4-209ENST00000572760 DEXIO95424 95 aa16.74■□□□□ 0.27
NPLOC4-209ENST00000572760 SCG2P13521 617 aa16.74■□□□□ 0.27
NPLOC4-209ENST00000572760 PRMT2P55345 433 aa16.74■□□□□ 0.27
NPLOC4-209ENST00000572760 CTU1Q7Z7A3 348 aaKnown RBP16.74■□□□□ 0.27
NPLOC4-209ENST00000572760 MCF2L2Q86YR7 1114 aa16.74■□□□□ 0.27
NPLOC4-209ENST00000572760 HSCBQ8IWL3 235 aa16.74■□□□□ 0.27
NPLOC4-209ENST00000572760 SOCS4Q8WXH5 440 aa16.74■□□□□ 0.27
NPLOC4-209ENST00000572760 GPKOWQ92917 476 aaPredicted RBP eCLIP16.74■□□□□ 0.27
NPLOC4-209ENST00000572760 SLC5A4Q9NY91 659 aa16.74■□□□□ 0.27
NPLOC4-209ENST00000572760 SRRDQ9UH36 339 aa16.74■□□□□ 0.27
NPLOC4-209ENST00000572760 MCM3APO60318 1980 aa16.74■□□□□ 0.27
NPLOC4-209ENST00000572760 PCNTO95613 3336 aa16.74■□□□□ 0.27
NPLOC4-209ENST00000572760 PTPDC1A2A3K4 754 aa16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 hCG_1984214I3L0E3 225 aa16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 NFIBO00712 420 aa16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 CYP2B6P20813 491 aa16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 ADORA2AP29274 412 aa16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 RGS2P41220 211 aa16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 NAPAP54920 295 aa16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 MAP2K5Q13163 448 aa16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 PFKFB3Q16875 520 aaPredicted RBP16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 RNF207Q6ZRF8 634 aa16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 OTOP1Q7RTM1 612 aa16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 ABRAQ8N0Z2 381 aa16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 ZNF713Q8N859 430 aaPredicted RBP16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 RAET1EQ8TD07 263 aa16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 WASF1Q92558 559 aa16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 LLPHQ9BRT6 129 aaKnown RBP16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 ORC3Q9UBD5 711 aaPredicted RBP16.73■□□□□ 0.27
NPLOC4-209ENST00000572760 PFASO15067 1338 aa16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 POTEB2H3BUK9 544 aa16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 CFBP00751 764 aa16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 FLT3LGP49771 235 aa16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 CAP1Q01518 475 aa16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 PRKCZQ05513 592 aa16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 GRB14Q14449 540 aa16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 WWC2Q6AWC2 1192 aa16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 NSUN7Q8NE18 718 aaKnown RBP16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 CCDC12Q8WUD4 166 aaPredicted RBP16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 CLEC4DQ8WXI8 215 aa16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 CUL5Q93034 780 aa16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 SNX21Q969T3 373 aa16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 A1CFQ9NQ94 594 aaKnown RBP16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 GABRQQ9UN88 632 aa16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 ZNF236Q9UL36 1845 aa16.72■□□□□ 0.27
NPLOC4-209ENST00000572760 STK36Q9NRP7 1315 aa16.71■□□□□ 0.27
NPLOC4-209ENST00000572760 K7ELQ4 463 aaPredicted RBP16.71■□□□□ 0.27
NPLOC4-209ENST00000572760 DTNBO60941 627 aa16.71■□□□□ 0.27
NPLOC4-209ENST00000572760 CTDNEP1O95476 244 aa16.71■□□□□ 0.27
NPLOC4-209ENST00000572760 PGK2P07205 417 aa16.71■□□□□ 0.27
NPLOC4-209ENST00000572760 XBP1P17861 261 aa16.71■□□□□ 0.27
NPLOC4-209ENST00000572760 CALML3P27482 149 aa16.71■□□□□ 0.27
NPLOC4-209ENST00000572760 BAATQ14032 418 aaPredicted RBP16.71■□□□□ 0.27
NPLOC4-209ENST00000572760 MORN1Q5T089 497 aa16.71■□□□□ 0.27
NPLOC4-209ENST00000572760 FAM184AQ8NB25 1140 aa16.71■□□□□ 0.27
NPLOC4-209ENST00000572760 CCDC148Q8NFR7 591 aa16.71■□□□□ 0.27
NPLOC4-209ENST00000572760 BARHL2Q9NY43 387 aa16.71■□□□□ 0.27
NPLOC4-209ENST00000572760 GJD2Q9UKL4 321 aa16.71■□□□□ 0.27
NPLOC4-209ENST00000572760 GCOM1H8Y6P7 765 aaPredicted RBP16.7■□□□□ 0.26
NPLOC4-209ENST00000572760 JAK2O60674 1132 aa16.7■□□□□ 0.26
NPLOC4-209ENST00000572760 POLR2MP0CAP2 368 aa16.7■□□□□ 0.26
NPLOC4-209ENST00000572760 HMGN5P82970 282 aaKnown RBP16.7■□□□□ 0.26
NPLOC4-209ENST00000572760 ST3GAL1Q11201 340 aa16.7■□□□□ 0.26
NPLOC4-209ENST00000572760 PKN1Q16512 942 aa16.7■□□□□ 0.26
NPLOC4-209ENST00000572760 PPP1R18Q6NYC8 613 aa16.7■□□□□ 0.26
NPLOC4-209ENST00000572760 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.7■□□□□ 0.26
NPLOC4-209ENST00000572760 RGS22Q8NE09 1264 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms