RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 SELENOOQ9BVL4 669 aa12□□□□□ -0.49
CCDC40-207ENST00000572253 ADAMTS2O95450 1211 aa12□□□□□ -0.49
CCDC40-207ENST00000572253 TFAP4Q01664 338 aa12□□□□□ -0.49
CCDC40-207ENST00000572253 NAALADL2Q58DX5 795 aa12□□□□□ -0.49
CCDC40-207ENST00000572253 LRRC31Q6UY01 552 aa12□□□□□ -0.49
CCDC40-207ENST00000572253 CCNI2Q6ZMN8 369 aaPredicted RBP12□□□□□ -0.49
CCDC40-207ENST00000572253 FAM84BQ96KN1 310 aaPredicted RBP12□□□□□ -0.49
CCDC40-207ENST00000572253 MKNK2Q9HBH9 465 aa12□□□□□ -0.49
CCDC40-207ENST00000572253 AGPAT5Q9NUQ2 364 aa12□□□□□ -0.49
CCDC40-207ENST00000572253 JRKLQ9Y4A0 524 aa12□□□□□ -0.49
CCDC40-207ENST00000572253 FAM205AQ6ZU69 1335 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 ITGB4P16144 1822 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 A0A1W2PQJ5 194 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 PP2D1A8MPX8 630 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 VGLL3A8MV65 326 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 KLRC4O43908 158 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 MAGEA9P43362 315 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 DNAJC21Q5F1R6 531 aaKnown RBP11.99□□□□□ -0.49
CCDC40-207ENST00000572253 FIGNQ5HY92 759 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 CALML4Q96GE6 196 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 FAM184BQ9ULE4 1060 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 STRCP1A6NGW2 1772 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 GOLGA6CA6NDK9 693 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 OPA1O60313 960 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 GOLGA6DP0CG33 693 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 PAFAH1B1P43034 410 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 GRM4Q14833 912 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 SPTY2D1Q68D10 685 aaPredicted RBP11.99□□□□□ -0.49
CCDC40-207ENST00000572253 DZIP1Q86YF9 867 aaKnown RBP11.99□□□□□ -0.49
CCDC40-207ENST00000572253 DAGLBQ8NCG7 672 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 IFIH1Q9BYX4 1025 aaKnown RBP11.99□□□□□ -0.49
CCDC40-207ENST00000572253 GOLGA6AQ9NYA3 693 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 AKR1B10O60218 316 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 ZMYND10O75800 440 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 SYF2O95926 243 aaKnown RBP11.99□□□□□ -0.49
CCDC40-207ENST00000572253 OR52Z1P0C646 297 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 CYP2D6P10635 497 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 KRT25Q7Z3Z0 450 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 GDAP1L1Q96MZ0 367 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 ERGIC2Q96RQ1 377 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 LACRTQ9GZZ8 138 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 TMEM60Q9H2L4 133 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 EFCC1Q9HA90 598 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 PCDHA6Q9UN73 950 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 TFR2Q9UP52 801 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 PCDHA8Q9Y5H6 950 aa11.99□□□□□ -0.49
CCDC40-207ENST00000572253 PLCG1P19174 1290 aa11.98□□□□□ -0.49
CCDC40-207ENST00000572253 HIBADHP31937 336 aaKnown RBP11.98□□□□□ -0.49
CCDC40-207ENST00000572253 GGCXP38435 758 aa11.98□□□□□ -0.49
CCDC40-207ENST00000572253 CYP27A1Q02318 531 aa11.98□□□□□ -0.49
CCDC40-207ENST00000572253 C2orf54Q08AI8 447 aa11.98□□□□□ -0.49
CCDC40-207ENST00000572253 TTC31Q49AM3 519 aaPredicted RBP11.98□□□□□ -0.49
CCDC40-207ENST00000572253 PPM1EQ8WY54 764 aa11.98□□□□□ -0.49
CCDC40-207ENST00000572253 DUSP9Q99956 384 aaKnown RBP11.98□□□□□ -0.49
CCDC40-207ENST00000572253 LZTS2Q9BRK4 669 aa11.98□□□□□ -0.49
CCDC40-207ENST00000572253 MTMR7Q9Y216 660 aa11.98□□□□□ -0.49
CCDC40-207ENST00000572253 VEGFAP15692 232 aaPredicted RBP11.98□□□□□ -0.49
CCDC40-207ENST00000572253 TCP1P17987 556 aaKnown RBP11.98□□□□□ -0.49
CCDC40-207ENST00000572253 SOGA3Q5TF21 947 aa11.98□□□□□ -0.49
CCDC40-207ENST00000572253 ZNF444Q8N0Y2 327 aaPredicted RBP11.98□□□□□ -0.49
CCDC40-207ENST00000572253 LRWD1Q9UFC0 647 aa11.98□□□□□ -0.49
CCDC40-207ENST00000572253 MINPP1Q9UNW1 487 aa11.98□□□□□ -0.49
CCDC40-207ENST00000572253 BAZ2AQ9UIF9 1905 aaKnown RBP11.98□□□□□ -0.49
CCDC40-207ENST00000572253 SND1Q7KZF4 910 aaKnown RBP eCLIP11.98□□□□□ -0.49
CCDC40-207ENST00000572253 MMGT1Q8N4V1 131 aa11.98□□□□□ -0.49
CCDC40-207ENST00000572253 TTYH3Q9C0H2 523 aa11.98□□□□□ -0.49
CCDC40-207ENST00000572253 SNX12Q9UMY4 172 aa11.98□□□□□ -0.49
CCDC40-207ENST00000572253 TSPY3P0CV98 308 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 TSPY8P0CW00 308 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 NONOQ15233 471 aaKnown RBP eCLIP11.97□□□□□ -0.49
CCDC40-207ENST00000572253 SF3B3Q15393 1217 aaKnown RBP11.97□□□□□ -0.49
CCDC40-207ENST00000572253 ANKRD40Q6AI12 368 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 FBXO33Q7Z6M2 555 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 CCDC84Q86UT8 332 aaPredicted RBP11.97□□□□□ -0.49
CCDC40-207ENST00000572253 TRIM9Q9C026 710 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 C6orf50Q9HD87 102 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 HYOU1Q9Y4L1 999 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 CICQ96RK0 1608 aaPredicted RBP11.97□□□□□ -0.49
CCDC40-207ENST00000572253 LOC102724428A0A0B4J2F2 783 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 PRPF6O94906 941 aaKnown RBP11.97□□□□□ -0.49
CCDC40-207ENST00000572253 NAPAP54920 295 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 SIK1P57059 783 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 TYW1BQ6NUM6 668 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 CDK5RAP3Q96JB5 506 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 DRC1Q96MC2 740 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 C7orf25Q9BPX7 421 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 ANKRD2Q9GZV1 360 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 LUC7LQ9NQ29 371 aaKnown RBP11.97□□□□□ -0.49
CCDC40-207ENST00000572253 SHTN1A0MZ66 631 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 GOLGA8KD6RF30 607 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 ZNF185O15231 689 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 GNA11P29992 359 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 ITIH3Q06033 890 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 PPFIA1Q13136 1202 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 LETM2Q2VYF4 491 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 RCSD1Q6JBY9 416 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 GBP6Q6ZN66 633 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 C2CD5Q86YS7 1000 aa11.97□□□□□ -0.49
CCDC40-207ENST00000572253 PURBQ96QR8 312 aaKnown RBP11.97□□□□□ -0.49
CCDC40-207ENST00000572253 BARHL2Q9NY43 387 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms