RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 KRT23Q9C075 422 aa10.2□□□□□ -0.78
SMG6-210ENST00000572205 RNF208Q9H0X6 261 aa10.2□□□□□ -0.78
SMG6-210ENST00000572205 MAD2L2Q9UI95 211 aa10.2□□□□□ -0.78
SMG6-210ENST00000572205 OGDHLQ9ULD0 1010 aa10.2□□□□□ -0.78
SMG6-210ENST00000572205 DDX49Q9Y6V7 483 aaKnown RBP10.2□□□□□ -0.78
SMG6-210ENST00000572205 NID2Q14112 1375 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 PALM3A6NDB9 673 aaPredicted RBP10.19□□□□□ -0.78
SMG6-210ENST00000572205 SOWAHBA6NEL2 793 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 NFIBO00712 420 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 SH2B2O14492 632 aaPredicted RBP10.19□□□□□ -0.78
SMG6-210ENST00000572205 TRIM66O15016 1216 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 CYTH3O43739 400 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 ICAM1P05362 532 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 ZNF865P0CJ78 1059 aaPredicted RBP10.19□□□□□ -0.78
SMG6-210ENST00000572205 FDX1P10109 184 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 COPB2P35606 906 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 UBXN2AP68543 259 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 MLLT1Q03111 559 aaPredicted RBP10.19□□□□□ -0.78
SMG6-210ENST00000572205 CCDC96Q2M329 555 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 TSGA10IPQ3SY00 556 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 WDR78Q5VTH9 848 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 MAMDC4Q6UXC1 1216 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 CHST3Q7LGC8 479 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 TRMT44Q8IYL2 757 aaKnown RBP10.19□□□□□ -0.78
SMG6-210ENST00000572205 CPXCR1Q8N123 301 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 KRI1Q8N9T8 703 aaKnown RBP10.19□□□□□ -0.78
SMG6-210ENST00000572205 DEFB118Q96PH6 123 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 MMP19Q99542 508 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 ANO2Q9NQ90 1003 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 RNF146Q9NTX7 359 aa10.19□□□□□ -0.78
SMG6-210ENST00000572205 DIS3Q9Y2L1 958 aaKnown RBP10.19□□□□□ -0.78
SMG6-210ENST00000572205 CDH23Q9H251 3354 aa10.18□□□□□ -0.78
SMG6-210ENST00000572205 SNAI1O95863 264 aaPredicted RBP10.18□□□□□ -0.78
SMG6-210ENST00000572205 FCER1AP12319 257 aa10.18□□□□□ -0.78
SMG6-210ENST00000572205 CNTN2Q02246 1040 aa10.18□□□□□ -0.78
SMG6-210ENST00000572205 GHRHRQ02643 423 aa10.18□□□□□ -0.78
SMG6-210ENST00000572205 GRM4Q14833 912 aa10.18□□□□□ -0.78
SMG6-210ENST00000572205 GPATCH4Q5T3I0 446 aaKnown RBP10.18□□□□□ -0.78
SMG6-210ENST00000572205 IQCA1Q86XH1 822 aa10.18□□□□□ -0.78
SMG6-210ENST00000572205 CHST13Q8NET6 341 aa10.18□□□□□ -0.78
SMG6-210ENST00000572205 MORC4Q8TE76 937 aa10.18□□□□□ -0.78
SMG6-210ENST00000572205 CHURC1Q8WUH1 139 aa10.18□□□□□ -0.78
SMG6-210ENST00000572205 LENG1Q96BZ8 264 aaPredicted RBP10.18□□□□□ -0.78
SMG6-210ENST00000572205 PURBQ96QR8 312 aaKnown RBP10.18□□□□□ -0.78
SMG6-210ENST00000572205 ZMYND15Q9H091 742 aa10.18□□□□□ -0.78
SMG6-210ENST00000572205 JMJD4Q9H9V9 463 aa10.18□□□□□ -0.78
SMG6-210ENST00000572205 GPCPD1Q9NPB8 672 aa10.18□□□□□ -0.78
SMG6-210ENST00000572205 CYP39A1Q9NYL5 469 aa10.18□□□□□ -0.78
SMG6-210ENST00000572205 MTMR7Q9Y216 660 aa10.18□□□□□ -0.78
SMG6-210ENST00000572205 IVNS1ABPQ9Y6Y0 642 aa10.18□□□□□ -0.78
SMG6-210ENST00000572205 SCN10AQ9Y5Y9 1956 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 SYNGAP1Q96PV0 1343 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 ZBED4O75132 1171 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 HSPA4P34932 840 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 EXOSC10Q01780 885 aaKnown RBP10.17□□□□□ -0.78
SMG6-210ENST00000572205 PDE4DQ08499 809 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 ASPRV1Q53RT3 343 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 CCDC174Q6PII3 467 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 SLC30A10Q6XR72 485 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 ADGRF4Q8IZF3 695 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 NCOA7Q8NI08 942 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 TINF2Q9BSI4 451 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 MTA3Q9BTC8 594 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 UBA5Q9GZZ9 404 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 ACAD9Q9H845 621 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 HMX1Q9NP08 348 aaPredicted RBP10.17□□□□□ -0.78
SMG6-210ENST00000572205 HOMER2Q9NSB8 354 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 COL20A1Q9P218 1284 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 TANC1Q9C0D5 1861 aa10.17□□□□□ -0.78
SMG6-210ENST00000572205 TRIOBPQ9H2D6 2365 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 CTAGE5O15320 804 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 PRC1O43663 620 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 FARP2O94887 1054 aaPredicted RBP10.16□□□□□ -0.78
SMG6-210ENST00000572205 NEFLP07196 543 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 CENPBP07199 599 aaPredicted RBP10.16□□□□□ -0.78
SMG6-210ENST00000572205 PTGS1P23219 599 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 EDNRBP24530 442 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 KCTD2Q14681 263 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 CDC37Q16543 378 aaPredicted RBP10.16□□□□□ -0.78
SMG6-210ENST00000572205 QRICH1Q2TAL8 776 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 TKFCQ3LXA3 575 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 CCDC178Q5BJE1 867 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 PRAMEF19Q5SWL8 479 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 IFIT1BQ5T764 474 aaKnown RBP10.16□□□□□ -0.78
SMG6-210ENST00000572205 SGMS1Q86VZ5 419 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 UBAC1Q9BSL1 405 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 MYL10Q9BUA6 226 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 TMEM106CQ9BVX2 250 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 RIOX1Q9H6W3 641 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 KAT14Q9H8E8 782 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 FBXO40Q9UH90 709 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 DDX20Q9UHI6 824 aaKnown RBP10.16□□□□□ -0.78
SMG6-210ENST00000572205 CCPG1Q9ULG6 757 aa10.16□□□□□ -0.78
SMG6-210ENST00000572205 GPR37O15354 613 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 SEPT4O43236 478 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 ADAMTS4O75173 837 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 ALAS1P13196 640 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 IRX5P78411 483 aaPredicted RBP10.15□□□□□ -0.78
SMG6-210ENST00000572205 FUT2Q10981 343 aa10.15□□□□□ -0.78
SMG6-210ENST00000572205 TMEM63BQ5T3F8 832 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms