RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 POTEB2H3BUK9 544 aa16.21■□□□□ 0.19
RPAIN-211ENST00000572174 PGK2P07205 417 aa16.21■□□□□ 0.19
RPAIN-211ENST00000572174 FBXO11Q86XK2 927 aa16.21■□□□□ 0.19
RPAIN-211ENST00000572174 SAMD3Q8N6K7 520 aa16.21■□□□□ 0.19
RPAIN-211ENST00000572174 JAKMIP1Q96N16 626 aaKnown RBP16.21■□□□□ 0.19
RPAIN-211ENST00000572174 DEFB118Q96PH6 123 aa16.21■□□□□ 0.19
RPAIN-211ENST00000572174 TINF2Q9BSI4 451 aa16.21■□□□□ 0.19
RPAIN-211ENST00000572174 A1CFQ9NQ94 594 aaKnown RBP16.21■□□□□ 0.19
RPAIN-211ENST00000572174 MRPL11Q9Y3B7 192 aaKnown RBP16.21■□□□□ 0.19
RPAIN-211ENST00000572174 LRRC37A2A6NM11 1700 aa16.2■□□□□ 0.18
RPAIN-211ENST00000572174 ZBTB5O15062 677 aa16.2■□□□□ 0.18
RPAIN-211ENST00000572174 CYBAP13498 195 aa16.2■□□□□ 0.18
RPAIN-211ENST00000572174 PPP2R5BQ15173 497 aa16.2■□□□□ 0.18
RPAIN-211ENST00000572174 MAMDC4Q6UXC1 1216 aa16.2■□□□□ 0.18
RPAIN-211ENST00000572174 NSMFQ6X4W1 530 aa16.2■□□□□ 0.18
RPAIN-211ENST00000572174 RASEFQ8IZ41 740 aa16.2■□□□□ 0.18
RPAIN-211ENST00000572174 RGS22Q8NE09 1264 aa16.2■□□□□ 0.18
RPAIN-211ENST00000572174 AMNQ9BXJ7 453 aa16.2■□□□□ 0.18
RPAIN-211ENST00000572174 UBA5Q9GZZ9 404 aa16.2■□□□□ 0.18
RPAIN-211ENST00000572174 RBM28Q9NW13 759 aaKnown RBP16.2■□□□□ 0.18
RPAIN-211ENST00000572174 FLRT1Q9NZU1 646 aa16.2■□□□□ 0.18
RPAIN-211ENST00000572174 SEC63Q9UGP8 760 aaKnown RBP16.2■□□□□ 0.18
RPAIN-211ENST00000572174 SNX14Q9Y5W7 946 aa16.2■□□□□ 0.18
RPAIN-211ENST00000572174 PTPDC1A2A3K4 754 aa16.19■□□□□ 0.18
RPAIN-211ENST00000572174 IGHA2P01877 340 aa16.19■□□□□ 0.18
RPAIN-211ENST00000572174 TFRCP02786 760 aaKnown RBP16.19■□□□□ 0.18
RPAIN-211ENST00000572174 CNGA1P29973 690 aa16.19■□□□□ 0.18
RPAIN-211ENST00000572174 CYP2C19P33261 490 aa16.19■□□□□ 0.18
RPAIN-211ENST00000572174 QRICH1Q2TAL8 776 aa16.19■□□□□ 0.18
RPAIN-211ENST00000572174 RNF207Q6ZRF8 634 aa16.19■□□□□ 0.18
RPAIN-211ENST00000572174 RRP36Q96EU6 259 aaKnown RBP16.19■□□□□ 0.18
RPAIN-211ENST00000572174 SPZ1Q9BXG8 430 aa16.19■□□□□ 0.18
RPAIN-211ENST00000572174 USP26Q9BXU7 913 aa16.19■□□□□ 0.18
RPAIN-211ENST00000572174 CRISPLD2Q9H0B8 497 aa16.19■□□□□ 0.18
RPAIN-211ENST00000572174 RIOX1Q9H6W3 641 aa16.19■□□□□ 0.18
RPAIN-211ENST00000572174 JMJD4Q9H9V9 463 aa16.19■□□□□ 0.18
RPAIN-211ENST00000572174 MAP3K20Q9NYL2 800 aaKnown RBP16.19■□□□□ 0.18
RPAIN-211ENST00000572174 CYP39A1Q9NYL5 469 aa16.19■□□□□ 0.18
RPAIN-211ENST00000572174 KIAA1217Q5T5P2 1943 aa16.19■□□□□ 0.18
RPAIN-211ENST00000572174 CCDC196A0A1B0GTZ2 297 aa16.18■□□□□ 0.18
RPAIN-211ENST00000572174 SEPT4O43236 478 aa16.18■□□□□ 0.18
RPAIN-211ENST00000572174 FARP2O94887 1054 aaPredicted RBP16.18■□□□□ 0.18
RPAIN-211ENST00000572174 EN2P19622 333 aaPredicted RBP16.18■□□□□ 0.18
RPAIN-211ENST00000572174 ANAPC15P60006 121 aa16.18■□□□□ 0.18
RPAIN-211ENST00000572174 SNAP25P60880 206 aa16.18■□□□□ 0.18
RPAIN-211ENST00000572174 EXOSC10Q01780 885 aaKnown RBP16.18■□□□□ 0.18
RPAIN-211ENST00000572174 TRIM32Q13049 653 aa16.18■□□□□ 0.18
RPAIN-211ENST00000572174 ADCK5Q3MIX3 580 aa16.18■□□□□ 0.18
RPAIN-211ENST00000572174 USH1GQ495M9 461 aa16.18■□□□□ 0.18
RPAIN-211ENST00000572174 MUM1L1Q5H9M0 696 aa16.18■□□□□ 0.18
RPAIN-211ENST00000572174 STAG2Q8N3U4 1231 aa16.18■□□□□ 0.18
RPAIN-211ENST00000572174 FBXL16Q8N461 479 aa16.18■□□□□ 0.18
RPAIN-211ENST00000572174 FAM133AQ8N9E0 248 aa16.18■□□□□ 0.18
RPAIN-211ENST00000572174 DNERQ8NFT8 737 aa16.18■□□□□ 0.18
RPAIN-211ENST00000572174 MTMR8Q96EF0 704 aa16.18■□□□□ 0.18
RPAIN-211ENST00000572174 ABHD16BQ9H3Z7 469 aa16.18■□□□□ 0.18
RPAIN-211ENST00000572174 DDX20Q9UHI6 824 aaKnown RBP16.18■□□□□ 0.18
RPAIN-211ENST00000572174 PNMA6FA0A0J9YX94 578 aa16.17■□□□□ 0.18
RPAIN-211ENST00000572174 ZBTB43O43298 467 aa16.17■□□□□ 0.18
RPAIN-211ENST00000572174 AKR1A1P14550 325 aa16.17■□□□□ 0.18
RPAIN-211ENST00000572174 CASTP20810 708 aaKnown RBP16.17■□□□□ 0.18
RPAIN-211ENST00000572174 APOA5Q6Q788 366 aa16.17■□□□□ 0.18
RPAIN-211ENST00000572174 MICU3Q86XE3 530 aa16.17■□□□□ 0.18
RPAIN-211ENST00000572174 HTATIP2Q9BUP3 242 aa16.17■□□□□ 0.18
RPAIN-211ENST00000572174 TM6SF1Q9BZW5 370 aa16.17■□□□□ 0.18
RPAIN-211ENST00000572174 SENP2Q9HC62 589 aa16.17■□□□□ 0.18
RPAIN-211ENST00000572174 VAT1LQ9HCJ6 419 aa16.17■□□□□ 0.18
RPAIN-211ENST00000572174 CYP46A1Q9Y6A2 500 aa16.17■□□□□ 0.18
RPAIN-211ENST00000572174 NFIBO00712 420 aa16.16■□□□□ 0.18
RPAIN-211ENST00000572174 RPS6KB1P23443 525 aa16.16■□□□□ 0.18
RPAIN-211ENST00000572174 CCND3P30281 292 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-211ENST00000572174 ARMCX2Q7L311 632 aa16.16■□□□□ 0.18
RPAIN-211ENST00000572174 HOMER1Q86YM7 354 aa16.16■□□□□ 0.18
RPAIN-211ENST00000572174 FANCBQ8NB91 859 aa16.16■□□□□ 0.18
RPAIN-211ENST00000572174 ARRDC4Q8NCT1 418 aa16.16■□□□□ 0.18
RPAIN-211ENST00000572174 SHISA4Q96DD7 197 aa16.16■□□□□ 0.18
RPAIN-211ENST00000572174 LRRC2Q9BYS8 371 aa16.16■□□□□ 0.18
RPAIN-211ENST00000572174 CPVLQ9H3G5 476 aa16.16■□□□□ 0.18
RPAIN-211ENST00000572174 OGDHLQ9ULD0 1010 aa16.16■□□□□ 0.18
RPAIN-211ENST00000572174 RARBP10826 455 aa16.15■□□□□ 0.18
RPAIN-211ENST00000572174 RTN1Q16799 776 aa16.15■□□□□ 0.18
RPAIN-211ENST00000572174 RUFY3Q7L099 469 aa16.15■□□□□ 0.18
RPAIN-211ENST00000572174 CLEC4DQ8WXI8 215 aa16.15■□□□□ 0.18
RPAIN-211ENST00000572174 MYL10Q9BUA6 226 aa16.15■□□□□ 0.18
RPAIN-211ENST00000572174 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.15■□□□□ 0.18
RPAIN-211ENST00000572174 RBM27Q9P2N5 1060 aaKnown RBP16.15■□□□□ 0.18
RPAIN-211ENST00000572174 PCDHA1Q9Y5I3 950 aa16.15■□□□□ 0.18
RPAIN-211ENST00000572174 BRCA2P51587 3418 aa16.14■□□□□ 0.17
RPAIN-211ENST00000572174 KLF18A0A0U1RQI7 1052 aa16.14■□□□□ 0.17
RPAIN-211ENST00000572174 GOLGA8AA7E2F4 631 aa16.14■□□□□ 0.17
RPAIN-211ENST00000572174 GOLGA8BA8MQT2 603 aa16.14■□□□□ 0.17
RPAIN-211ENST00000572174 hCG_1984214I3L0E3 225 aa16.14■□□□□ 0.17
RPAIN-211ENST00000572174 CALML3P27482 149 aa16.14■□□□□ 0.17
RPAIN-211ENST00000572174 RPS6P62753 249 aaKnown RBP16.14■□□□□ 0.17
RPAIN-211ENST00000572174 BAATQ14032 418 aaPredicted RBP16.14■□□□□ 0.17
RPAIN-211ENST00000572174 Q6ZUG5 572 aa16.14■□□□□ 0.17
RPAIN-211ENST00000572174 NECAB2Q7Z6G3 386 aa16.14■□□□□ 0.17
RPAIN-211ENST00000572174 TEX2Q8IWB9 1127 aa16.14■□□□□ 0.17
RPAIN-211ENST00000572174 ZNF713Q8N859 430 aaPredicted RBP16.14■□□□□ 0.17
RPAIN-211ENST00000572174 PIGSQ96S52 555 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms