RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 ASTN1O14525 1302 aa13.56□□□□□ -0.24
CHMP6-202ENST00000571457 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.55□□□□□ -0.24
CHMP6-202ENST00000571457 KIF28PB7ZC32 967 aa13.55□□□□□ -0.24
CHMP6-202ENST00000571457 CNTN2Q02246 1040 aa13.55□□□□□ -0.24
CHMP6-202ENST00000571457 PHOSPHO2Q8TCD6 241 aa13.55□□□□□ -0.24
CHMP6-202ENST00000571457 SCLYQ96I15 445 aa13.55□□□□□ -0.24
CHMP6-202ENST00000571457 AGBL1Q96MI9 1066 aa13.55□□□□□ -0.24
CHMP6-202ENST00000571457 SLC9A7Q96T83 725 aa13.55□□□□□ -0.24
CHMP6-202ENST00000571457 ALDH8A1Q9H2A2 487 aaPredicted RBP13.55□□□□□ -0.24
CHMP6-202ENST00000571457 ZNF287Q9HBT7 754 aa13.55□□□□□ -0.24
CHMP6-202ENST00000571457 HOMER2Q9NSB8 354 aa13.55□□□□□ -0.24
CHMP6-202ENST00000571457 CLIP2Q9UDT6 1046 aa13.55□□□□□ -0.24
CHMP6-202ENST00000571457 GRIN2DO15399 1336 aa13.55□□□□□ -0.24
CHMP6-202ENST00000571457 RFXAPO00287 272 aa13.54□□□□□ -0.24
CHMP6-202ENST00000571457 SMPD1P17405 629 aa13.54□□□□□ -0.24
CHMP6-202ENST00000571457 RASA1P20936 1047 aa13.54□□□□□ -0.24
CHMP6-202ENST00000571457 RFC2P35250 354 aa13.54□□□□□ -0.24
CHMP6-202ENST00000571457 TTLL4Q14679 1199 aa13.54□□□□□ -0.24
CHMP6-202ENST00000571457 TKFCQ3LXA3 575 aa13.54□□□□□ -0.24
CHMP6-202ENST00000571457 SBK1Q52WX2 424 aa13.54□□□□□ -0.24
CHMP6-202ENST00000571457 RPAP2Q8IXW5 612 aaPredicted RBP13.54□□□□□ -0.24
CHMP6-202ENST00000571457 ARNTL2Q8WYA1 636 aa13.54□□□□□ -0.24
CHMP6-202ENST00000571457 MKL1Q969V6 931 aa13.54□□□□□ -0.24
CHMP6-202ENST00000571457 BOLA2Q9H3K6 86 aa13.54□□□□□ -0.24
CHMP6-202ENST00000571457 GREB1LQ9C091 1923 aaPredicted RBP13.54□□□□□ -0.24
CHMP6-202ENST00000571457 BMP3P12645 472 aa13.53□□□□□ -0.24
CHMP6-202ENST00000571457 ATP5JP18859 108 aa13.53□□□□□ -0.24
CHMP6-202ENST00000571457 PSMC6P62333 389 aa13.53□□□□□ -0.24
CHMP6-202ENST00000571457 SLFNL1Q499Z3 407 aa13.53□□□□□ -0.24
CHMP6-202ENST00000571457 GIMAP6Q6P9H5 292 aa13.53□□□□□ -0.24
CHMP6-202ENST00000571457 DEFB128Q7Z7B8 93 aa13.53□□□□□ -0.24
CHMP6-202ENST00000571457 GMCL1P1Q8NEA9 526 aa13.53□□□□□ -0.24
CHMP6-202ENST00000571457 VWCEQ96DN2 955 aa13.53□□□□□ -0.24
CHMP6-202ENST00000571457 HAUS7Q99871 368 aa13.53□□□□□ -0.24
CHMP6-202ENST00000571457 CERS4Q9HA82 394 aa13.53□□□□□ -0.24
CHMP6-202ENST00000571457 A1CFQ9NQ94 594 aaKnown RBP13.53□□□□□ -0.24
CHMP6-202ENST00000571457 RNF146Q9NTX7 359 aa13.53□□□□□ -0.24
CHMP6-202ENST00000571457 POLR3EQ9NVU0 708 aa13.53□□□□□ -0.24
CHMP6-202ENST00000571457 LRRC37A2A6NM11 1700 aa13.53□□□□□ -0.24
CHMP6-202ENST00000571457 SOWAHBA6NEL2 793 aa13.52□□□□□ -0.25
CHMP6-202ENST00000571457 HMMRO75330 724 aa13.52□□□□□ -0.25
CHMP6-202ENST00000571457 TTLL1O95922 423 aa13.52□□□□□ -0.25
CHMP6-202ENST00000571457 RLBP1P12271 317 aa13.52□□□□□ -0.25
CHMP6-202ENST00000571457 STAT2P52630 851 aa13.52□□□□□ -0.25
CHMP6-202ENST00000571457 TAP1Q03518 808 aa13.52□□□□□ -0.25
CHMP6-202ENST00000571457 ZNF444Q8N0Y2 327 aaPredicted RBP13.52□□□□□ -0.25
CHMP6-202ENST00000571457 CHURC1Q8WUH1 139 aa13.52□□□□□ -0.25
CHMP6-202ENST00000571457 BCL11AQ9H165 835 aa13.52□□□□□ -0.25
CHMP6-202ENST00000571457 VTA1Q9NP79 307 aa13.52□□□□□ -0.25
CHMP6-202ENST00000571457 ISY1Q9ULR0 285 aaKnown RBP13.52□□□□□ -0.25
CHMP6-202ENST00000571457 TNKSO95271 1327 aa13.52□□□□□ -0.25
CHMP6-202ENST00000571457 MYH4Q9Y623 1939 aa13.51□□□□□ -0.25
CHMP6-202ENST00000571457 IGKV6D-41A0A0C4DH26 115 aa13.51□□□□□ -0.25
CHMP6-202ENST00000571457 MINDY4BA8MYZ0 360 aa13.51□□□□□ -0.25
CHMP6-202ENST00000571457 PI4K2BG5E9Z4 385 aa13.51□□□□□ -0.25
CHMP6-202ENST00000571457 RAB11FIP3O75154 756 aa13.51□□□□□ -0.25
CHMP6-202ENST00000571457 CYP2C9P11712 490 aa13.51□□□□□ -0.25
CHMP6-202ENST00000571457 IKQ13123 557 aaPredicted RBP13.51□□□□□ -0.25
CHMP6-202ENST00000571457 BRDTQ58F21 947 aaPredicted RBP13.51□□□□□ -0.25
CHMP6-202ENST00000571457 SLFN13Q68D06 897 aa13.51□□□□□ -0.25
CHMP6-202ENST00000571457 FAM160B2Q86V87 743 aa13.51□□□□□ -0.25
CHMP6-202ENST00000571457 HERC6Q8IVU3 1022 aa13.51□□□□□ -0.25
CHMP6-202ENST00000571457 RETREG2Q8NC44 543 aa13.51□□□□□ -0.25
CHMP6-202ENST00000571457 TRERF1Q96PN7 1200 aa13.51□□□□□ -0.25
CHMP6-202ENST00000571457 FTOQ9C0B1 505 aaKnown RBP eCLIP13.51□□□□□ -0.25
CHMP6-202ENST00000571457 PUS7LQ9H0K6 701 aaKnown RBP13.51□□□□□ -0.25
CHMP6-202ENST00000571457 GPHNQ9NQX3 736 aaPredicted RBP13.51□□□□□ -0.25
CHMP6-202ENST00000571457 TRMT13Q9NUP7 481 aaKnown RBP13.51□□□□□ -0.25
CHMP6-202ENST00000571457 MTMR4Q9NYA4 1195 aa13.51□□□□□ -0.25
CHMP6-202ENST00000571457 LMCD1Q9NZU5 365 aa13.51□□□□□ -0.25
CHMP6-202ENST00000571457 MYH7P12883 1935 aa13.51□□□□□ -0.25
CHMP6-202ENST00000571457 EPOPA6NHQ4 379 aa13.5□□□□□ -0.25
CHMP6-202ENST00000571457 TMEM232C9JQI7 657 aa13.5□□□□□ -0.25
CHMP6-202ENST00000571457 PITPNM1O00562 1244 aa13.5□□□□□ -0.25
CHMP6-202ENST00000571457 CPT1AP50416 773 aa13.5□□□□□ -0.25
CHMP6-202ENST00000571457 GRB10Q13322 594 aa13.5□□□□□ -0.25
CHMP6-202ENST00000571457 DUSP28Q4G0W2 176 aa13.5□□□□□ -0.25
CHMP6-202ENST00000571457 KRT40Q6A162 431 aa13.5□□□□□ -0.25
CHMP6-202ENST00000571457 TAPT1Q6NXT6 567 aa13.5□□□□□ -0.25
CHMP6-202ENST00000571457 KIAA1211Q6ZU35 1233 aa13.5□□□□□ -0.25
CHMP6-202ENST00000571457 EEPD1Q7L9B9 569 aa13.5□□□□□ -0.25
CHMP6-202ENST00000571457 FBXO16Q8IX29 292 aaPredicted RBP13.5□□□□□ -0.25
CHMP6-202ENST00000571457 STK11IPQ8N1F8 1099 aa13.5□□□□□ -0.25
CHMP6-202ENST00000571457 CEP95Q96GE4 821 aa13.5□□□□□ -0.25
CHMP6-202ENST00000571457 STRBPQ96SI9 672 aaKnown RBP13.5□□□□□ -0.25
CHMP6-202ENST00000571457 C11orf16Q9NQ32 467 aa13.5□□□□□ -0.25
CHMP6-202ENST00000571457 PDGFCQ9NRA1 345 aa13.5□□□□□ -0.25
CHMP6-202ENST00000571457 FAM86C2PA6NEL3 165 aa13.49□□□□□ -0.25
CHMP6-202ENST00000571457 GSG1L2A8MUP6 293 aa13.49□□□□□ -0.25
CHMP6-202ENST00000571457 BAIAP3O94812 1187 aa13.49□□□□□ -0.25
CHMP6-202ENST00000571457 ALAS1P13196 640 aa13.49□□□□□ -0.25
CHMP6-202ENST00000571457 KCNJ6P48051 423 aa13.49□□□□□ -0.25
CHMP6-202ENST00000571457 PPP4R3BQ5MIZ7 849 aa13.49□□□□□ -0.25
CHMP6-202ENST00000571457 LRRC47Q8N1G4 583 aaKnown RBP13.49□□□□□ -0.25
CHMP6-202ENST00000571457 STAG1Q8WVM7 1258 aa13.49□□□□□ -0.25
CHMP6-202ENST00000571457 GMCL1Q96IK5 515 aa13.49□□□□□ -0.25
CHMP6-202ENST00000571457 MTG1Q9BT17 334 aaPredicted RBP13.49□□□□□ -0.25
CHMP6-202ENST00000571457 CYP39A1Q9NYL5 469 aa13.49□□□□□ -0.25
CHMP6-202ENST00000571457 ADD3Q9UEY8 706 aaKnown RBP13.49□□□□□ -0.25
CHMP6-202ENST00000571457 ZNF536O15090 1300 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms