RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ACRP10323 421 aa15.62■□□□□ 0.09
CCDC40-205ENST00000571028 HOXD11P31277 338 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-205ENST00000571028 COPB2P35606 906 aa15.62■□□□□ 0.09
CCDC40-205ENST00000571028 ADGRE1Q14246 886 aa15.62■□□□□ 0.09
CCDC40-205ENST00000571028 TMEM132BQ14DG7 1078 aa15.62■□□□□ 0.09
CCDC40-205ENST00000571028 NECTIN1Q15223 517 aa15.62■□□□□ 0.09
CCDC40-205ENST00000571028 KCNA10Q16322 511 aa15.62■□□□□ 0.09
CCDC40-205ENST00000571028 RNF20Q5VTR2 975 aa15.62■□□□□ 0.09
CCDC40-205ENST00000571028 STOX1Q6ZVD7 989 aa15.62■□□□□ 0.09
CCDC40-205ENST00000571028 RALYLQ86SE5 291 aaKnown RBP15.62■□□□□ 0.09
CCDC40-205ENST00000571028 CEP95Q96GE4 821 aa15.62■□□□□ 0.09
CCDC40-205ENST00000571028 PPP1R12CQ9BZL4 782 aa15.62■□□□□ 0.09
CCDC40-205ENST00000571028 KRT23Q9C075 422 aa15.62■□□□□ 0.09
CCDC40-205ENST00000571028 ZHX1Q9UKY1 873 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-205ENST00000571028 MTMR7Q9Y216 660 aa15.62■□□□□ 0.09
CCDC40-205ENST00000571028 WDR46O15213 610 aaKnown RBP15.61■□□□□ 0.09
CCDC40-205ENST00000571028 FGRP09769 529 aa15.61■□□□□ 0.09
CCDC40-205ENST00000571028 ZNF865P0CJ78 1059 aaPredicted RBP15.61■□□□□ 0.09
CCDC40-205ENST00000571028 ZNF792Q3KQV3 632 aa15.61■□□□□ 0.09
CCDC40-205ENST00000571028 ZNF365Q70YC5 407 aa15.61■□□□□ 0.09
CCDC40-205ENST00000571028 CHST3Q7LGC8 479 aa15.61■□□□□ 0.09
CCDC40-205ENST00000571028 RIOX2Q8IUF8 465 aa15.61■□□□□ 0.09
CCDC40-205ENST00000571028 SIAH1Q8IUQ4 282 aa15.61■□□□□ 0.09
CCDC40-205ENST00000571028 LRRC47Q8N1G4 583 aaKnown RBP15.61■□□□□ 0.09
CCDC40-205ENST00000571028 PCSK9Q8NBP7 692 aaKnown RBP15.61■□□□□ 0.09
CCDC40-205ENST00000571028 NECAB3Q96P71 396 aaPredicted RBP15.61■□□□□ 0.09
CCDC40-205ENST00000571028 NKX2-4Q9H2Z4 354 aa15.61■□□□□ 0.09
CCDC40-205ENST00000571028 VCPKMTQ9H867 229 aa15.61■□□□□ 0.09
CCDC40-205ENST00000571028 CNNM2Q9H8M5 875 aa15.61■□□□□ 0.09
CCDC40-205ENST00000571028 CXXC1Q9P0U4 656 aaPredicted RBP15.61■□□□□ 0.09
CCDC40-205ENST00000571028 ISY1Q9ULR0 285 aaKnown RBP15.61■□□□□ 0.09
CCDC40-205ENST00000571028 STX8Q9UNK0 236 aa15.61■□□□□ 0.09
CCDC40-205ENST00000571028 ELP1O95163 1332 aa15.61■□□□□ 0.09
CCDC40-205ENST00000571028 A0A0G2JMZ2 1700 aa15.6■□□□□ 0.09
CCDC40-205ENST00000571028 A0A0U1RQG5 324 aaPredicted RBP15.6■□□□□ 0.09
CCDC40-205ENST00000571028 SEC24BO95487 1268 aa15.6■□□□□ 0.09
CCDC40-205ENST00000571028 C6orf222P0C671 652 aaPredicted RBP15.6■□□□□ 0.09
CCDC40-205ENST00000571028 PCP11498 1178 aaKnown RBP15.6■□□□□ 0.09
CCDC40-205ENST00000571028 STAT3P40763 770 aa15.6■□□□□ 0.09
CCDC40-205ENST00000571028 KIAA1755Q5JYT7 1200 aa15.6■□□□□ 0.09
CCDC40-205ENST00000571028 RASIP1Q5U651 963 aa15.6■□□□□ 0.09
CCDC40-205ENST00000571028 C16orf59Q7L2K0 433 aa15.6■□□□□ 0.09
CCDC40-205ENST00000571028 NCOA7Q8NI08 942 aa15.6■□□□□ 0.09
CCDC40-205ENST00000571028 IL17RBQ9NRM6 502 aa15.6■□□□□ 0.09
CCDC40-205ENST00000571028 MTMR4Q9NYA4 1195 aa15.6■□□□□ 0.09
CCDC40-205ENST00000571028 ZSWIM5Q9P217 1185 aa15.6■□□□□ 0.09
CCDC40-205ENST00000571028 IGKV6D-41A0A0C4DH26 115 aa15.59■□□□□ 0.09
CCDC40-205ENST00000571028 MCCP23508 829 aa15.59■□□□□ 0.09
CCDC40-205ENST00000571028 C8orf34Q49A92 452 aa15.59■□□□□ 0.09
CCDC40-205ENST00000571028 PPP2R2DQ66LE6 453 aa15.59■□□□□ 0.09
CCDC40-205ENST00000571028 CYB5R4Q7L1T6 521 aa15.59■□□□□ 0.09
CCDC40-205ENST00000571028 RASEFQ8IZ41 740 aa15.59■□□□□ 0.09
CCDC40-205ENST00000571028 MSL3Q8N5Y2 521 aaKnown RBP15.59■□□□□ 0.09
CCDC40-205ENST00000571028 KLHDC9Q8NEP7 349 aa15.59■□□□□ 0.09
CCDC40-205ENST00000571028 DDX11Q96FC9 970 aa15.59■□□□□ 0.09
CCDC40-205ENST00000571028 USP26Q9BXU7 913 aa15.59■□□□□ 0.09
CCDC40-205ENST00000571028 IL23AQ9NPF7 189 aa15.59■□□□□ 0.09
CCDC40-205ENST00000571028 NYAP2Q9P242 653 aa15.59■□□□□ 0.09
CCDC40-205ENST00000571028 TMX2Q9Y320 296 aa15.59■□□□□ 0.09
CCDC40-205ENST00000571028 MYH8P13535 1937 aa15.58■□□□□ 0.09
CCDC40-205ENST00000571028 ARVCFO00192 962 aa15.58■□□□□ 0.08
CCDC40-205ENST00000571028 DUSP11O75319 330 aaKnown RBP15.58■□□□□ 0.08
CCDC40-205ENST00000571028 TTLL1O95922 423 aa15.58■□□□□ 0.08
CCDC40-205ENST00000571028 FGBP02675 491 aa15.58■□□□□ 0.08
CCDC40-205ENST00000571028 ASGR1P07306 291 aa15.58■□□□□ 0.08
CCDC40-205ENST00000571028 HSPA4P34932 840 aa15.58■□□□□ 0.08
CCDC40-205ENST00000571028 IQCA1Q86XH1 822 aa15.58■□□□□ 0.08
CCDC40-205ENST00000571028 HERVK_113Q902F9 699 aa15.58■□□□□ 0.08
CCDC40-205ENST00000571028 UBAC1Q9BSL1 405 aa15.58■□□□□ 0.08
CCDC40-205ENST00000571028 ARIH1Q9Y4X5 557 aaPredicted RBP15.58■□□□□ 0.08
CCDC40-205ENST00000571028 SYNGAP1Q96PV0 1343 aa15.58■□□□□ 0.08
CCDC40-205ENST00000571028 VWA5AO00534 786 aa15.57■□□□□ 0.08
CCDC40-205ENST00000571028 CST5P28325 142 aaPredicted RBP15.57■□□□□ 0.08
CCDC40-205ENST00000571028 TFF2Q03403 129 aa15.57■□□□□ 0.08
CCDC40-205ENST00000571028 ADCK5Q3MIX3 580 aa15.57■□□□□ 0.08
CCDC40-205ENST00000571028 ZSCAN10Q96SZ4 725 aaPredicted RBP15.57■□□□□ 0.08
CCDC40-205ENST00000571028 GOPCQ9HD26 462 aa15.57■□□□□ 0.08
CCDC40-205ENST00000571028 PLIN4Q96Q06 1357 aa15.57■□□□□ 0.08
CCDC40-205ENST00000571028 MYADML2A6NDP7 307 aa15.56■□□□□ 0.08
CCDC40-205ENST00000571028 IFIT3O14879 490 aaKnown RBP15.56■□□□□ 0.08
CCDC40-205ENST00000571028 GTPBP6O43824 516 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-205ENST00000571028 BMP1P13497 986 aa15.56■□□□□ 0.08
CCDC40-205ENST00000571028 CYP2C18P33260 490 aa15.56■□□□□ 0.08
CCDC40-205ENST00000571028 CDK7P50613 346 aa15.56■□□□□ 0.08
CCDC40-205ENST00000571028 COL9A3Q14050 684 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-205ENST00000571028 GNASQ5JWF2 1037 aa15.56■□□□□ 0.08
CCDC40-205ENST00000571028 TMEM31Q5JXX7 168 aa15.56■□□□□ 0.08
CCDC40-205ENST00000571028 OTOP2Q7RTS6 562 aa15.56■□□□□ 0.08
CCDC40-205ENST00000571028 TCEANC2Q96MN5 208 aa15.56■□□□□ 0.08
CCDC40-205ENST00000571028 JAKMIP1Q96N16 626 aaKnown RBP15.56■□□□□ 0.08
CCDC40-205ENST00000571028 NEK1Q96PY6 1258 aa15.56■□□□□ 0.08
CCDC40-205ENST00000571028 NUP88Q99567 741 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-205ENST00000571028 TMEM47Q9BQJ4 181 aa15.56■□□□□ 0.08
CCDC40-205ENST00000571028 FBXO28Q9NVF7 368 aa15.56■□□□□ 0.08
CCDC40-205ENST00000571028 PPP1R9AQ9ULJ8 1098 aa15.56■□□□□ 0.08
CCDC40-205ENST00000571028 YBX2Q9Y2T7 364 aaKnown RBP15.56■□□□□ 0.08
CCDC40-205ENST00000571028 CTDP1Q9Y5B0 961 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-205ENST00000571028 SNX14Q9Y5W7 946 aa15.56■□□□□ 0.08
CCDC40-205ENST00000571028 TNKSO95271 1327 aa15.56■□□□□ 0.08
CCDC40-205ENST00000571028 BDP1A6H8Y1 2624 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms