RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, human

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG6-208	ENST00000570874	UBN2	Q6ZU65	1347 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	LOC102724428	A0A0B4J2F2	783 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	FAM177B	A6PVY3	158 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	VGLL3	A8MV65	326 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874		H0Y3Z8	333 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	PIK3CD	O00329	1044 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	FOXN3	O00409	490 aa	Predicted RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	AKAP10	O43572	662 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	PIP5K1C	O60331	668 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	NBN	O60934	754 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	BAG2	O95816	211 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	SETSIP	P0DME0	302 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	TYRP1	P17643	537 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	MX1	P20591	662 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	CTNNA1	P35221	906 aa	Known RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	ADD2	P35612	726 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	ATP6V1A	P38606	617 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	CRKL	P46109	303 aa	Known RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	CCT5	P48643	541 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	NEK2	P51955	445 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	NEK3	P51956	506 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	SIK1	P57059	783 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	MAP3K9	P80192	1104 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	PLIN5	Q00G26	463 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	PFKP	Q01813	784 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	PLCB3	Q01970	1234 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	ROR1	Q01973	937 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	DPYD	Q12882	1025 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	COX10	Q12887	443 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	IFRD2	Q12894	506 aa	Predicted RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	TCIRG1	Q13488	830 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	PIN1	Q13526	163 aa	Predicted RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	KRT72	Q14CN4	511 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	TCEA2	Q15560	299 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	FAM102B	Q5T8I3	360 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	LMBR1L	Q6UX01	489 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	PODN	Q7Z5L7	613 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	PNMA8A	Q86V59	439 aa	Predicted RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	LILRB2	Q8N423	598 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	ZNF713	Q8N859	430 aa	Predicted RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	CCDC191	Q8NCU4	936 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	GIMAP8	Q8ND71	665 aa	Predicted RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	ANKK1	Q8NFD2	765 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	WDR66	Q8TBY9	1149 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	RASGRP4	Q8TDF6	673 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	JPH3	Q8WXH2	748 aa	Predicted RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	TAF4B	Q92750	862 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	SH3KBP1	Q96B97	665 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	THAP11	Q96EK4	314 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	SEC16B	Q96JE7	1060 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	TBATA	Q96M53	351 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	STRBP	Q96SI9	672 aa	Known RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	KIF2C	Q99661	725 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	ELAC2	Q9BQ52	826 aa	Known RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	FAM126A	Q9BYI3	521 aa	Predicted RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	CDH19	Q9H159	772 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	NUCKS1	Q9H1E3	243 aa	Known RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	PDCL3	Q9H2J4	239 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	DBNDD1	Q9H9R9	158 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	RASSF1	Q9NS23	344 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	PDRG1	Q9NUG6	133 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	RNF19A	Q9NV58	838 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	TBK1	Q9UHD2	729 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	PCSK1N	Q9UHG2	260 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	FBXO10	Q9UK96	956 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	RRP15	Q9Y3B9	282 aa	Known RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	AFG3L2	Q9Y4W6	797 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	DGKB	Q9Y6T7	804 aa		4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.05	□□□□□ -1.76
SMG6-208	ENST00000570874	ZNF609	O15014	1411 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	RIC1	Q4ADV7	1423 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	MAST2	Q6P0Q8	1798 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	NRXN2	Q9P2S2	1712 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	COL15A1	P39059	1388 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	GOLGA6L3	A6NEY3	463 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	CCDC85C	A6NKD9	419 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	KLF4	O43474	513 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	TMCC2	O75069	709 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	CD2BP2	O95400	341 aa	Known RBP	4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	OAT	P04181	439 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	CHGB	P05060	677 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	TPM3	P06753	285 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	POU3F3	P20264	500 aa	Predicted RBP	4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	DNAJB2	P25686	324 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	STIP1	P31948	543 aa	Known RBP	4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	RXRG	P48443	463 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	TPD52	P55327	224 aa	Predicted RBP	4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	BPIFB3	P59826	476 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	UBXN2A	P68543	259 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	NFKB2	Q00653	900 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	EHHADH	Q08426	723 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	TFCP2	Q12800	502 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	EIF2B5	Q13144	721 aa	Known RBP	4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	PRKG2	Q13237	762 aa		4.04	□□□□□ -1.76
SMG6-208	ENST00000570874	BECN1	Q14457	450 aa		4.04	□□□□□ -1.76

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