RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 CHST13Q8NET6 341 aa12.57□□□□□ -0.4
CTDNEP1-202ENST00000570380 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.57□□□□□ -0.4
CTDNEP1-202ENST00000570380 AP5M1Q9H0R1 490 aa12.57□□□□□ -0.4
CTDNEP1-202ENST00000570380 UBE2ZQ9H832 354 aaPredicted RBP12.57□□□□□ -0.4
CTDNEP1-202ENST00000570380 ATP8A2Q9NTI2 1148 aa12.57□□□□□ -0.4
CTDNEP1-202ENST00000570380 LMCD1Q9NZU5 365 aa12.57□□□□□ -0.4
CTDNEP1-202ENST00000570380 FBXO40Q9UH90 709 aa12.57□□□□□ -0.4
CTDNEP1-202ENST00000570380 DDX49Q9Y6V7 483 aaKnown RBP12.57□□□□□ -0.4
CTDNEP1-202ENST00000570380 USP34Q70CQ2 3546 aa12.57□□□□□ -0.4
CTDNEP1-202ENST00000570380 SOWAHBA6NEL2 793 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 KIF28PB7ZC32 967 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 USP17L12C9JPN9 530 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 USP17L21D6R901 530 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 F5H6K3 240 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 ZBED4O75132 1171 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 NDUFB10O96000 172 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 ALADP13716 330 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 IL9P15248 144 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 KLRC3Q07444 240 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 CSPP1Q1MSJ5 1256 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 LEXMQ3ZCV2 418 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 SLFNL1Q499Z3 407 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 GDPD5Q8WTR4 605 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 CLUAP1Q96AJ1 413 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 KCNH6Q9H252 994 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 C1orf115Q9H7X2 142 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 SLC38A10Q9HBR0 1119 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 PDGFCQ9NRA1 345 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 TNKSO95271 1327 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 TRIOO75962 3097 aa12.56□□□□□ -0.4
CTDNEP1-202ENST00000570380 LCHNA4D1U4 455 aa12.55□□□□□ -0.4
CTDNEP1-202ENST00000570380 SUPT20HL2P0C7V6 817 aa12.55□□□□□ -0.4
CTDNEP1-202ENST00000570380 SSTR3P32745 418 aaPredicted RBP12.55□□□□□ -0.4
CTDNEP1-202ENST00000570380 RFC2P35250 354 aa12.55□□□□□ -0.4
CTDNEP1-202ENST00000570380 TAPT1Q6NXT6 567 aa12.55□□□□□ -0.4
CTDNEP1-202ENST00000570380 AACSQ86V21 672 aa12.55□□□□□ -0.4
CTDNEP1-202ENST00000570380 KIFC2Q96AC6 838 aa12.55□□□□□ -0.4
CTDNEP1-202ENST00000570380 Q9Y3F1 56 aa12.55□□□□□ -0.4
CTDNEP1-202ENST00000570380 CTDP1Q9Y5B0 961 aaPredicted RBP12.55□□□□□ -0.4
CTDNEP1-202ENST00000570380 POTEB3A0JP26 581 aa12.54□□□□□ -0.4
CTDNEP1-202ENST00000570380 IPO8O15397 1037 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-202ENST00000570380 MBD4O95243 580 aa12.54□□□□□ -0.4
CTDNEP1-202ENST00000570380 IQCF3P0C7M6 154 aa12.54□□□□□ -0.4
CTDNEP1-202ENST00000570380 KCNA5P22460 613 aa12.54□□□□□ -0.4
CTDNEP1-202ENST00000570380 IQSEC1Q6DN90 963 aa12.54□□□□□ -0.4
CTDNEP1-202ENST00000570380 POTEBQ6S5H4 581 aa12.54□□□□□ -0.4
CTDNEP1-202ENST00000570380 TMEM57Q8N5G2 664 aa12.54□□□□□ -0.4
CTDNEP1-202ENST00000570380 ANKS1AQ92625 1134 aa12.54□□□□□ -0.4
CTDNEP1-202ENST00000570380 FTOQ9C0B1 505 aaKnown RBP eCLIP12.54□□□□□ -0.4
CTDNEP1-202ENST00000570380 SUGCTQ9HAC7 445 aa12.54□□□□□ -0.4
CTDNEP1-202ENST00000570380 A1CFQ9NQ94 594 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-202ENST00000570380 HOMER2Q9NSB8 354 aa12.54□□□□□ -0.4
CTDNEP1-202ENST00000570380 NYAP2Q9P242 653 aa12.54□□□□□ -0.4
CTDNEP1-202ENST00000570380 C5orf42Q9H799 3197 aa12.54□□□□□ -0.4
CTDNEP1-202ENST00000570380 GRXCR2A6NFK2 248 aa12.53□□□□□ -0.4
CTDNEP1-202ENST00000570380 ASB14A6NK59 587 aa12.53□□□□□ -0.4
CTDNEP1-202ENST00000570380 GOLIM4O00461 696 aa12.53□□□□□ -0.4
CTDNEP1-202ENST00000570380 OAZ1P54368 228 aa12.53□□□□□ -0.4
CTDNEP1-202ENST00000570380 PTCRAQ6ISU1 281 aaPredicted RBP12.53□□□□□ -0.4
CTDNEP1-202ENST00000570380 CTR9Q6PD62 1173 aa12.53□□□□□ -0.4
CTDNEP1-202ENST00000570380 EEPD1Q7L9B9 569 aa12.53□□□□□ -0.4
CTDNEP1-202ENST00000570380 TMCO2Q7Z6W1 182 aaPredicted RBP12.53□□□□□ -0.4
CTDNEP1-202ENST00000570380 AMOTL1Q8IY63 956 aa12.53□□□□□ -0.4
CTDNEP1-202ENST00000570380 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.53□□□□□ -0.4
CTDNEP1-202ENST00000570380 DNAJC2Q99543 621 aaKnown RBP12.53□□□□□ -0.4
CTDNEP1-202ENST00000570380 ZNF536O15090 1300 aa12.53□□□□□ -0.4
CTDNEP1-202ENST00000570380 PITPNM1O00562 1244 aa12.52□□□□□ -0.41
CTDNEP1-202ENST00000570380 DCXO43602 365 aa12.52□□□□□ -0.41
CTDNEP1-202ENST00000570380 CHGBP05060 677 aa12.52□□□□□ -0.41
CTDNEP1-202ENST00000570380 RASA1P20936 1047 aa12.52□□□□□ -0.41
CTDNEP1-202ENST00000570380 PURAQ00577 322 aaKnown RBP12.52□□□□□ -0.41
CTDNEP1-202ENST00000570380 FBXO16Q8IX29 292 aaPredicted RBP12.52□□□□□ -0.41
CTDNEP1-202ENST00000570380 PPP1R13LQ8WUF5 828 aa12.52□□□□□ -0.41
CTDNEP1-202ENST00000570380 FRAT1Q92837 279 aaPredicted RBP12.52□□□□□ -0.41
CTDNEP1-202ENST00000570380 PHOX2BQ99453 314 aa12.52□□□□□ -0.41
CTDNEP1-202ENST00000570380 ACAD9Q9H845 621 aa12.52□□□□□ -0.41
CTDNEP1-202ENST00000570380 FEM1BQ9UK73 627 aa12.52□□□□□ -0.41
CTDNEP1-202ENST00000570380 MTUS1Q9ULD2 1270 aa12.52□□□□□ -0.41
CTDNEP1-202ENST00000570380 ZBED9Q6R2W3 1325 aa12.52□□□□□ -0.41
CTDNEP1-202ENST00000570380 CFAP54Q96N23 3096 aa12.51□□□□□ -0.41
CTDNEP1-202ENST00000570380 BAIAP3O94812 1187 aa12.51□□□□□ -0.41
CTDNEP1-202ENST00000570380 ADD2P35612 726 aa12.51□□□□□ -0.41
CTDNEP1-202ENST00000570380 ERVK-21P61565 698 aa12.51□□□□□ -0.41
CTDNEP1-202ENST00000570380 WDR5P61964 334 aaKnown RBP12.51□□□□□ -0.41
CTDNEP1-202ENST00000570380 NBPF20Q3BBV1 942 aa12.51□□□□□ -0.41
CTDNEP1-202ENST00000570380 FAM47CQ5HY64 1035 aa12.51□□□□□ -0.41
CTDNEP1-202ENST00000570380 KIAA1211Q6ZU35 1233 aa12.51□□□□□ -0.41
CTDNEP1-202ENST00000570380 RETREG2Q8NC44 543 aa12.51□□□□□ -0.41
CTDNEP1-202ENST00000570380 IL1RAPL2Q9NP60 686 aa12.51□□□□□ -0.41
CTDNEP1-202ENST00000570380 RNF146Q9NTX7 359 aa12.51□□□□□ -0.41
CTDNEP1-202ENST00000570380 POLR3EQ9NVU0 708 aa12.51□□□□□ -0.41
CTDNEP1-202ENST00000570380 CLIP2Q9UDT6 1046 aa12.51□□□□□ -0.41
CTDNEP1-202ENST00000570380 EXOC6BQ9Y2D4 811 aa12.51□□□□□ -0.41
CTDNEP1-202ENST00000570380 COG6Q9Y2V7 657 aa12.51□□□□□ -0.41
CTDNEP1-202ENST00000570380 MYL3P08590 195 aa12.5□□□□□ -0.41
CTDNEP1-202ENST00000570380 KCNJ6P48051 423 aa12.5□□□□□ -0.41
CTDNEP1-202ENST00000570380 DEFB103AP81534 67 aa12.5□□□□□ -0.41
CTDNEP1-202ENST00000570380 GPNMBQ14956 572 aa12.5□□□□□ -0.41
CTDNEP1-202ENST00000570380 DUSP28Q4G0W2 176 aa12.5□□□□□ -0.41
CTDNEP1-202ENST00000570380 HFE2Q6ZVN8 426 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms