RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ANKRD42Q8N9B4 389 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 AK8Q96MA6 479 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 ZMYND12Q9H0C1 365 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 PALMDQ9NP74 551 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 KCND1Q9NSA2 647 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 FANCLQ9NW38 375 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 ZNF652Q9Y2D9 606 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 MFAP3LO75121 409 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 CYP2E1P05181 493 aaPredicted RBP7.74□□□□□ -1.17
CNOT1-216ENST00000569240 YWHAEP62258 255 aaKnown RBP7.74□□□□□ -1.17
CNOT1-216ENST00000569240 RARS2Q5T160 578 aaKnown RBP7.74□□□□□ -1.17
CNOT1-216ENST00000569240 CDKL2Q92772 493 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 CCDC138Q96M89 665 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 MED21Q13503 144 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 TMEM259Q4ZIN3 620 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 MAGEC3Q8TD91 643 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 CNKSR2Q8WXI2 1034 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 PAPOLBQ9NRJ5 636 aaKnown RBP7.74□□□□□ -1.17
CNOT1-216ENST00000569240 ASXL2Q76L83 1435 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 O00370 1275 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 C2CD5Q86YS7 1000 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 DNAJC9Q8WXX5 260 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 TRAPPC9Q96Q05 1148 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 GID8Q9NWU2 228 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 KDM1AO60341 852 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 NDUFA5Q16718 116 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 NYAP1Q6ZVC0 841 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 CEP70Q8NHQ1 597 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 LRRC37BQ96QE4 947 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 PCDHA7Q9UN72 937 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 ADCY3O60266 1144 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 CASP10Q92851 521 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 VCPKMTQ9H867 229 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 INTUQ9ULD6 942 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 CFAP43Q8NDM7 1665 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 RFX7Q2KHR2 1363 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 GYG2O15488 501 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 KRT8P05787 483 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 ICA1LQ8NDH6 482 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 SLC17A8Q8NDX2 589 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 IFT122Q9HBG6 1241 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 NLRP2Q9NX02 1062 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 ITSN2Q9NZM3 1697 aa7.74□□□□□ -1.17
CNOT1-216ENST00000569240 TSPY2A6NKD2 308 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 MINDY4BA8MYZ0 360 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 PLCG2P16885 1265 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 BPIFB4P59827 614 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 TUBA4AP68366 448 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 CDR2Q01850 454 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 PDCLQ13371 301 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 DIXDC1Q155Q3 683 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 LRRC8BQ6P9F7 803 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 NOSTRINQ8IVI9 506 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 ZNF579Q8NAF0 562 aaKnown RBP7.73□□□□□ -1.17
CNOT1-216ENST00000569240 TEKT4Q8WW24 435 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 TEKT1Q969V4 418 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 OPTNQ96CV9 577 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 NUDCD1Q96RS6 583 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 KRT12Q99456 494 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 PITPNM3Q9BZ71 974 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 KDM4CQ9H3R0 1056 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 VPS37BQ9H9H4 285 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 COMMD10Q9Y6G5 202 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 A0A1W2PQC6 194 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 FSBPO95073 299 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 VHLP40337 213 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 INPP1P49441 399 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 RAD23BP54727 409 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 ROR2Q01974 943 aaKnown RBP7.73□□□□□ -1.17
CNOT1-216ENST00000569240 KBTBD3Q8NAB2 608 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 FOXP1Q9H334 677 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-216ENST00000569240 NOVA2Q9UNW9 492 aaKnown RBP7.73□□□□□ -1.17
CNOT1-216ENST00000569240 NUB1Q9Y5A7 615 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 ARHGEF10O15013 1369 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 PLEKHG2Q9H7P9 1386 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 EXOC5O00471 708 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 NVLO15381 856 aaKnown RBP7.73□□□□□ -1.17
CNOT1-216ENST00000569240 ACTN1P12814 892 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 C4BPBP20851 252 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 CDC37Q16543 378 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-216ENST00000569240 WDR44Q5JSH3 913 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 KDM7AQ6ZMT4 941 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 BZW1Q7L1Q6 419 aaKnown RBP7.73□□□□□ -1.17
CNOT1-216ENST00000569240 HORMAD1Q86X24 394 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 ZNF473Q8WTR7 871 aaKnown RBP7.73□□□□□ -1.17
CNOT1-216ENST00000569240 APPBP2Q92624 585 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 USP28Q96RU2 1077 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 MTA3Q9BTC8 594 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 HAUS5O94927 633 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 ABCD1P33897 745 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 GGCXP38435 758 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 IRAK1P51617 712 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 DEFA1P59665 94 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 DEFA3P59666 94 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 ACTN3Q08043 901 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-216ENST00000569240 POTEAQ6S8J7 498 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 PALM2Q8IXS6 379 aa7.73□□□□□ -1.17
CNOT1-216ENST00000569240 CDC5LQ99459 802 aaKnown RBP7.73□□□□□ -1.17
CNOT1-216ENST00000569240 ROPN1BQ9BZX4 212 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-216ENST00000569240 ROPN1Q9HAT0 212 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms