RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 TMEM47Q9BQJ4 181 aa13.39□□□□□ -0.27
SNAPC5-208ENST00000568875 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNAPC5-208ENST00000568875 NEDD4P46934 1319 aa13.39□□□□□ -0.27
SNAPC5-208ENST00000568875 ZBED4O75132 1171 aa13.39□□□□□ -0.27
SNAPC5-208ENST00000568875 TOP1P11387 765 aaKnown RBP13.39□□□□□ -0.27
SNAPC5-208ENST00000568875 FCER1AP12319 257 aa13.39□□□□□ -0.27
SNAPC5-208ENST00000568875 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
SNAPC5-208ENST00000568875 STAT2P52630 851 aa13.39□□□□□ -0.27
SNAPC5-208ENST00000568875 KRT85P78386 507 aa13.39□□□□□ -0.27
SNAPC5-208ENST00000568875 CHURC1Q8WUH1 139 aa13.39□□□□□ -0.27
SNAPC5-208ENST00000568875 CHMP4CQ96CF2 233 aa13.39□□□□□ -0.27
SNAPC5-208ENST00000568875 TEX13BQ9BXU2 312 aa13.39□□□□□ -0.27
SNAPC5-208ENST00000568875 SCAND2PQ9GZW5 306 aaPredicted RBP13.39□□□□□ -0.27
SNAPC5-208ENST00000568875 RIPK3Q9Y572 518 aa13.39□□□□□ -0.27
SNAPC5-208ENST00000568875 CEP290O15078 2479 aa13.38□□□□□ -0.27
SNAPC5-208ENST00000568875 FDX1P10109 184 aa13.38□□□□□ -0.27
SNAPC5-208ENST00000568875 COPB2P35606 906 aa13.38□□□□□ -0.27
SNAPC5-208ENST00000568875 TOB2Q14106 344 aaPredicted RBP13.38□□□□□ -0.27
SNAPC5-208ENST00000568875 KCTD1Q719H9 257 aa13.38□□□□□ -0.27
SNAPC5-208ENST00000568875 FAM160B2Q86V87 743 aa13.38□□□□□ -0.27
SNAPC5-208ENST00000568875 NEK1Q96PY6 1258 aa13.38□□□□□ -0.27
SNAPC5-208ENST00000568875 ZSWIM5Q9P217 1185 aa13.38□□□□□ -0.27
SNAPC5-208ENST00000568875 KDM4AO75164 1064 aa13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 TFRCP02786 760 aaKnown RBP13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 OAZ1P54368 228 aa13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 DNM1Q05193 864 aaKnown RBP13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 MFSD14CQ5VZR4 134 aa13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 OLFML2BQ68BL8 750 aa13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 SNRNP48Q6IEG0 339 aaKnown RBP13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 RASGRP2Q7LDG7 609 aa13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 DGKHQ86XP1 1220 aa13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 CPXCR1Q8N123 301 aa13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 DCAF4Q8WV16 495 aa13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 ANKS1AQ92625 1134 aa13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 LARP6Q9BRS8 491 aaKnown RBP13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 LLPHQ9BRT6 129 aaKnown RBP13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 FUCA2Q9BTY2 467 aa13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 RAVER2Q9HCJ3 691 aaKnown RBP13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 DNAH12Q6ZR08 3092 aa13.37□□□□□ -0.27
SNAPC5-208ENST00000568875 B4E1Z4 1266 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 FIBPO43427 364 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 CCND3P30281 292 aaPredicted RBP13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 CYP2C19P33261 490 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 FOXD4L6Q3SYB3 417 aaPredicted RBP13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 FOXD4L3Q6VB84 417 aaPredicted RBP13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 MMP19Q99542 508 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 ZKSCAN3Q9BRR0 538 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 SLC5A4Q9NY91 659 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 LAMA4Q16363 1823 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 ZNF236Q9UL36 1845 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 ZNF536O15090 1300 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 VPS37CA5D8V6 355 aaPredicted RBP13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 CYP21A2P08686 494 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 SNHG28P0DPA3 235 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 KCTD2Q14681 263 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 ZNF792Q3KQV3 632 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 CCDC178Q5BJE1 867 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 LHX8Q68G74 356 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 TTBK2Q6IQ55 1244 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 BTNL9Q6UXG8 535 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 IQCA1Q86XH1 822 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 NECAB1Q8N987 351 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 RNF214Q8ND24 703 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 MAML3Q96JK9 1138 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 KRT23Q9C075 422 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 OGDHLQ9ULD0 1010 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 PRR12Q9ULL5 1215 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 MTMR7Q9Y216 660 aa13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 CTDP1Q9Y5B0 961 aaPredicted RBP13.36□□□□□ -0.27
SNAPC5-208ENST00000568875 PGK2P07205 417 aa13.35□□□□□ -0.27
SNAPC5-208ENST00000568875 PDHBP11177 359 aa13.35□□□□□ -0.27
SNAPC5-208ENST00000568875 TRPV1Q8NER1 839 aa13.35□□□□□ -0.27
SNAPC5-208ENST00000568875 GTF3C6Q969F1 213 aa13.35□□□□□ -0.27
SNAPC5-208ENST00000568875 ZSCAN10Q96SZ4 725 aaPredicted RBP13.35□□□□□ -0.27
SNAPC5-208ENST00000568875 CNNM2Q9H8M5 875 aa13.35□□□□□ -0.27
SNAPC5-208ENST00000568875 DIS3Q9Y2L1 958 aaKnown RBP13.35□□□□□ -0.27
SNAPC5-208ENST00000568875 TCHHQ07283 1943 aa13.35□□□□□ -0.27
SNAPC5-208ENST00000568875 DNAJC25-GNG10A0A024R161 153 aa13.34□□□□□ -0.27
SNAPC5-208ENST00000568875 MNX1P50219 401 aaPredicted RBP13.34□□□□□ -0.27
SNAPC5-208ENST00000568875 IKQ13123 557 aaPredicted RBP13.34□□□□□ -0.27
SNAPC5-208ENST00000568875 CHST13Q8NET6 341 aa13.34□□□□□ -0.27
SNAPC5-208ENST00000568875 AGBL1Q96MI9 1066 aa13.34□□□□□ -0.27
SNAPC5-208ENST00000568875 AGXT2Q9BYV1 514 aa13.34□□□□□ -0.27
SNAPC5-208ENST00000568875 ZSCAN16Q9H4T2 348 aaPredicted RBP13.34□□□□□ -0.27
SNAPC5-208ENST00000568875 FARP2O94887 1054 aaPredicted RBP13.33□□□□□ -0.27
SNAPC5-208ENST00000568875 CCDC192P0DO97 292 aa13.33□□□□□ -0.27
SNAPC5-208ENST00000568875 SLC16A2P36021 539 aa13.33□□□□□ -0.27
SNAPC5-208ENST00000568875 CCDC96Q2M329 555 aa13.33□□□□□ -0.27
SNAPC5-208ENST00000568875 FBXL16Q8N461 479 aa13.33□□□□□ -0.27
SNAPC5-208ENST00000568875 ENAHQ8N8S7 591 aaPredicted RBP13.33□□□□□ -0.27
SNAPC5-208ENST00000568875 ANKLE1Q8NAG6 615 aa13.33□□□□□ -0.27
SNAPC5-208ENST00000568875 KIF3AQ9Y496 699 aa13.33□□□□□ -0.27
SNAPC5-208ENST00000568875 TAF6LQ9Y6J9 622 aa13.33□□□□□ -0.27
SNAPC5-208ENST00000568875 SMCHD1A6NHR9 2005 aa13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 TPM3P06753 285 aa13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 CYBAP13498 195 aa13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 SNAP25P60880 206 aa13.33□□□□□ -0.28
SNAPC5-208ENST00000568875 ZNF543Q08ER8 600 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms