RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 PTPRSQ13332 1948 aa14.26□□□□□ -0.13
VPS9D1-207ENST00000568691 CNTN2Q02246 1040 aa14.26□□□□□ -0.13
VPS9D1-207ENST00000568691 POLA2Q14181 598 aa14.26□□□□□ -0.13
VPS9D1-207ENST00000568691 HFE2Q6ZVN8 426 aa14.26□□□□□ -0.13
VPS9D1-207ENST00000568691 TMCO2Q7Z6W1 182 aaPredicted RBP14.26□□□□□ -0.13
VPS9D1-207ENST00000568691 CERS3Q8IU89 383 aa14.26□□□□□ -0.13
VPS9D1-207ENST00000568691 DDX11Q96FC9 970 aa14.26□□□□□ -0.13
VPS9D1-207ENST00000568691 TEX13BQ9BXU2 312 aa14.26□□□□□ -0.13
VPS9D1-207ENST00000568691 ALDH8A1Q9H2A2 487 aaPredicted RBP14.26□□□□□ -0.13
VPS9D1-207ENST00000568691 SPC25Q9HBM1 224 aa14.26□□□□□ -0.13
VPS9D1-207ENST00000568691 CYP2D7A0A087X1C5 515 aa14.25□□□□□ -0.13
VPS9D1-207ENST00000568691 SMPD1P17405 629 aa14.25□□□□□ -0.13
VPS9D1-207ENST00000568691 COPB2P35606 906 aa14.25□□□□□ -0.13
VPS9D1-207ENST00000568691 TET1Q8NFU7 2136 aa14.25□□□□□ -0.13
VPS9D1-207ENST00000568691 PHOSPHO2Q8TCD6 241 aa14.25□□□□□ -0.13
VPS9D1-207ENST00000568691 EAF2Q96CJ1 260 aaPredicted RBP14.25□□□□□ -0.13
VPS9D1-207ENST00000568691 SLC9A7Q96T83 725 aa14.25□□□□□ -0.13
VPS9D1-207ENST00000568691 CCDC8Q9H0W5 538 aaPredicted RBP14.25□□□□□ -0.13
VPS9D1-207ENST00000568691 KCNH6Q9H252 994 aa14.25□□□□□ -0.13
VPS9D1-207ENST00000568691 PDGFCQ9NRA1 345 aa14.25□□□□□ -0.13
VPS9D1-207ENST00000568691 ZBTB47Q9UFB7 747 aaPredicted RBP14.25□□□□□ -0.13
VPS9D1-207ENST00000568691 GRXCR2A6NFK2 248 aa14.24□□□□□ -0.13
VPS9D1-207ENST00000568691 ATP2A1O14983 1001 aa14.24□□□□□ -0.13
VPS9D1-207ENST00000568691 CABYRO75952 493 aa14.24□□□□□ -0.13
VPS9D1-207ENST00000568691 TNFAIP2Q03169 654 aa14.24□□□□□ -0.13
VPS9D1-207ENST00000568691 GPNMBQ14956 572 aa14.24□□□□□ -0.13
VPS9D1-207ENST00000568691 FSCN1Q16658 493 aaKnown RBP14.24□□□□□ -0.13
VPS9D1-207ENST00000568691 HSP90AB4PQ58FF6 505 aa14.24□□□□□ -0.13
VPS9D1-207ENST00000568691 TLK2Q86UE8 772 aa14.24□□□□□ -0.13
VPS9D1-207ENST00000568691 LCORLQ8N3X6 602 aa14.24□□□□□ -0.13
VPS9D1-207ENST00000568691 PRSS33Q8NF86 280 aa14.24□□□□□ -0.13
VPS9D1-207ENST00000568691 PPP1R13LQ8WUF5 828 aa14.24□□□□□ -0.13
VPS9D1-207ENST00000568691 SUGCTQ9HAC7 445 aa14.24□□□□□ -0.13
VPS9D1-207ENST00000568691 ZDBF2Q9HCK1 2354 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 MAGEB6P1A0A0J9YX57 407 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 TCRBV5S4A2TA0A5A2 114 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 SOWAHBA6NEL2 793 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 DCXO43602 365 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 PRKAB2O43741 272 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 RAB11FIP3O75154 756 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 PFKMP08237 780 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 ALADP13716 330 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 KCNA5P22460 613 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 SSTR3P32745 418 aaPredicted RBP14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 CDK8P49336 464 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 TCTN1Q2MV58 587 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 SLFNL1Q499Z3 407 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 FAM133AQ8N9E0 248 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 SLF1Q9BQI6 1058 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 SH2D4AQ9H788 454 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 RAVER2Q9HCJ3 691 aaKnown RBP14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 LMCD1Q9NZU5 365 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 SWAP70Q9UH65 585 aa14.23□□□□□ -0.13
VPS9D1-207ENST00000568691 DYNC1LI2O43237 492 aaPredicted RBP14.22□□□□□ -0.13
VPS9D1-207ENST00000568691 PDE6AP16499 860 aa14.22□□□□□ -0.13
VPS9D1-207ENST00000568691 ANKRD45Q5TZF3 282 aa14.22□□□□□ -0.13
VPS9D1-207ENST00000568691 PTCRAQ6ISU1 281 aaPredicted RBP14.22□□□□□ -0.13
VPS9D1-207ENST00000568691 TAPT1Q6NXT6 567 aa14.22□□□□□ -0.13
VPS9D1-207ENST00000568691 ALG13Q9NP73 1137 aaKnown RBP14.22□□□□□ -0.13
VPS9D1-207ENST00000568691 TNKSO95271 1327 aa14.21□□□□□ -0.13
VPS9D1-207ENST00000568691 C5orf42Q9H799 3197 aa14.21□□□□□ -0.13
VPS9D1-207ENST00000568691 C19orf67A6NJJ6 358 aa14.21□□□□□ -0.13
VPS9D1-207ENST00000568691 PDE4AP27815 886 aa14.21□□□□□ -0.13
VPS9D1-207ENST00000568691 SLC4A3P48751 1232 aa14.21□□□□□ -0.13
VPS9D1-207ENST00000568691 IER5LQ5T953 404 aa14.21□□□□□ -0.13
VPS9D1-207ENST00000568691 CPXCR1Q8N123 301 aa14.21□□□□□ -0.13
VPS9D1-207ENST00000568691 NEK9Q8TD19 979 aa14.21□□□□□ -0.13
VPS9D1-207ENST00000568691 BACH2Q9BYV9 841 aa14.21□□□□□ -0.13
VPS9D1-207ENST00000568691 CRNKL1Q9BZJ0 848 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-207ENST00000568691 LNPKQ9C0E8 428 aa14.21□□□□□ -0.13
VPS9D1-207ENST00000568691 NOP58Q9Y2X3 529 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-207ENST00000568691 TECTAO75443 2155 aa14.21□□□□□ -0.13
VPS9D1-207ENST00000568691 SPTBN4Q9H254 2564 aa14.21□□□□□ -0.14
VPS9D1-207ENST00000568691 ZFHX2Q9C0A1 2572 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-207ENST00000568691 MYH7P12883 1935 aa14.2□□□□□ -0.14
VPS9D1-207ENST00000568691 CHGBP05060 677 aa14.2□□□□□ -0.14
VPS9D1-207ENST00000568691 IQCF3P0C7M6 154 aa14.2□□□□□ -0.14
VPS9D1-207ENST00000568691 DEFB103AP81534 67 aa14.2□□□□□ -0.14
VPS9D1-207ENST00000568691 ZP2Q05996 745 aa14.2□□□□□ -0.14
VPS9D1-207ENST00000568691 CSPP1Q1MSJ5 1256 aa14.2□□□□□ -0.14
VPS9D1-207ENST00000568691 C12orf60Q5U649 245 aa14.2□□□□□ -0.14
VPS9D1-207ENST00000568691 C16orf86Q6ZW13 317 aa14.2□□□□□ -0.14
VPS9D1-207ENST00000568691 ERC1Q8IUD2 1116 aa14.2□□□□□ -0.14
VPS9D1-207ENST00000568691 CCDC17Q96LX7 622 aa14.2□□□□□ -0.14
VPS9D1-207ENST00000568691 SEZ6LQ9BYH1 1024 aa14.2□□□□□ -0.14
VPS9D1-207ENST00000568691 LRRCC1Q9C099 1032 aa14.2□□□□□ -0.14
VPS9D1-207ENST00000568691 KANSL2Q9H9L4 492 aa14.2□□□□□ -0.14
VPS9D1-207ENST00000568691 SLC38A10Q9HBR0 1119 aa14.2□□□□□ -0.14
VPS9D1-207ENST00000568691 GREB1LQ9C091 1923 aaPredicted RBP14.19□□□□□ -0.14
VPS9D1-207ENST00000568691 ZNF532Q9HCE3 1301 aa14.19□□□□□ -0.14
VPS9D1-207ENST00000568691 H3BQ06 376 aaPredicted RBP14.19□□□□□ -0.14
VPS9D1-207ENST00000568691 NDUFB10O96000 172 aa14.19□□□□□ -0.14
VPS9D1-207ENST00000568691 ERVK-21P61565 698 aa14.19□□□□□ -0.14
VPS9D1-207ENST00000568691 BMP2KLQ5H9B9 411 aa14.19□□□□□ -0.14
VPS9D1-207ENST00000568691 NOL8Q76FK4 1167 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-207ENST00000568691 SKAP1Q86WV1 359 aa14.19□□□□□ -0.14
VPS9D1-207ENST00000568691 ANKRD35Q8N283 1001 aa14.19□□□□□ -0.14
VPS9D1-207ENST00000568691 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.19□□□□□ -0.14
VPS9D1-207ENST00000568691 CTAGE1Q96RT6 745 aa14.19□□□□□ -0.14
VPS9D1-207ENST00000568691 ARMT1Q9H993 441 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms