RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.2■□□□□ 0.34
KLHDC4-223ENST00000568499 K7ELQ4 463 aaPredicted RBP17.19■□□□□ 0.34
KLHDC4-223ENST00000568499 PEX10O60683 326 aa17.19■□□□□ 0.34
KLHDC4-223ENST00000568499 HSPA8P11142 646 aaKnown RBP17.19■□□□□ 0.34
KLHDC4-223ENST00000568499 SCG2P13521 617 aa17.19■□□□□ 0.34
KLHDC4-223ENST00000568499 XBP1P17861 261 aa17.19■□□□□ 0.34
KLHDC4-223ENST00000568499 HMGN5P82970 282 aaKnown RBP17.19■□□□□ 0.34
KLHDC4-223ENST00000568499 PFKFB3Q16875 520 aaPredicted RBP17.19■□□□□ 0.34
KLHDC4-223ENST00000568499 SLC35G1Q2M3R5 365 aa17.19■□□□□ 0.34
KLHDC4-223ENST00000568499 ANKRD35Q8N283 1001 aa17.19■□□□□ 0.34
KLHDC4-223ENST00000568499 MMP19Q99542 508 aa17.19■□□□□ 0.34
KLHDC4-223ENST00000568499 PORCNQ9H237 461 aa17.19■□□□□ 0.34
KLHDC4-223ENST00000568499 EFCC1Q9HA90 598 aa17.19■□□□□ 0.34
KLHDC4-223ENST00000568499 SLC5A4Q9NY91 659 aa17.19■□□□□ 0.34
KLHDC4-223ENST00000568499 STK36Q9NRP7 1315 aa17.19■□□□□ 0.34
KLHDC4-223ENST00000568499 RLFQ13129 1914 aa17.18■□□□□ 0.34
KLHDC4-223ENST00000568499 CD2BP2O95400 341 aaKnown RBP17.18■□□□□ 0.34
KLHDC4-223ENST00000568499 BECN1Q14457 450 aa17.18■□□□□ 0.34
KLHDC4-223ENST00000568499 GPR142Q7Z601 462 aa17.18■□□□□ 0.34
KLHDC4-223ENST00000568499 ABRAQ8N0Z2 381 aa17.18■□□□□ 0.34
KLHDC4-223ENST00000568499 CD99L2Q8TCZ2 262 aa17.18■□□□□ 0.34
KLHDC4-223ENST00000568499 SOCS4Q8WXH5 440 aa17.18■□□□□ 0.34
KLHDC4-223ENST00000568499 DDX11Q96FC9 970 aa17.18■□□□□ 0.34
KLHDC4-223ENST00000568499 GLT8D2Q9H1C3 349 aa17.18■□□□□ 0.34
KLHDC4-223ENST00000568499 ORC3Q9UBD5 711 aaPredicted RBP17.18■□□□□ 0.34
KLHDC4-223ENST00000568499 RIPK3Q9Y572 518 aa17.18■□□□□ 0.34
KLHDC4-223ENST00000568499 PFASO15067 1338 aa17.18■□□□□ 0.34
KLHDC4-223ENST00000568499 A0A0G2JMZ2 1700 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 hCG_1642624A0A1W2PR95 340 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 PTPDC1A2A3K4 754 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 SLC15A5A6NIM6 579 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 PTPREP23469 700 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 LBX1P52954 281 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 NAPAP54920 295 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 PRMT2P55345 433 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 PPP1R18Q6NYC8 613 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 SAMD3Q8N6K7 520 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 FAM184AQ8NB25 1140 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 RGS22Q8NE09 1264 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 NSUN7Q8NE18 718 aaKnown RBP17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 CCDC148Q8NFR7 591 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 NUDT12Q9BQG2 462 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 BARHL2Q9NY43 387 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 PARP14Q460N5 1801 aa17.17■□□□□ 0.34
KLHDC4-223ENST00000568499 ECM2O94769 699 aaPredicted RBP17.16■□□□□ 0.34
KLHDC4-223ENST00000568499 HSP90AA1P07900 732 aaKnown RBP17.16■□□□□ 0.34
KLHDC4-223ENST00000568499 DPP9Q86TI2 863 aa17.16■□□□□ 0.34
KLHDC4-223ENST00000568499 TEX2Q8IWB9 1127 aa17.16■□□□□ 0.34
KLHDC4-223ENST00000568499 FAM177A1Q8N128 213 aaPredicted RBP17.16■□□□□ 0.34
KLHDC4-223ENST00000568499 CUL5Q93034 780 aa17.16■□□□□ 0.34
KLHDC4-223ENST00000568499 TRIM47Q96LD4 638 aa17.16■□□□□ 0.34
KLHDC4-223ENST00000568499 SH3GLB2Q9NR46 395 aa17.16■□□□□ 0.34
KLHDC4-223ENST00000568499 MAP3K20Q9NYL2 800 aaKnown RBP17.16■□□□□ 0.34
KLHDC4-223ENST00000568499 PPP1R11O60927 126 aaPredicted RBP17.15■□□□□ 0.34
KLHDC4-223ENST00000568499 PPFIA3O75145 1194 aa17.15■□□□□ 0.34
KLHDC4-223ENST00000568499 CTDNEP1O95476 244 aa17.15■□□□□ 0.34
KLHDC4-223ENST00000568499 MRPL12P52815 198 aaKnown RBP17.15■□□□□ 0.34
KLHDC4-223ENST00000568499 TRIM29Q14134 588 aa17.15■□□□□ 0.34
KLHDC4-223ENST00000568499 WWC2Q6AWC2 1192 aa17.15■□□□□ 0.34
KLHDC4-223ENST00000568499 NSMFQ6X4W1 530 aa17.15■□□□□ 0.34
KLHDC4-223ENST00000568499 RNF207Q6ZRF8 634 aa17.15■□□□□ 0.34
KLHDC4-223ENST00000568499 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.15■□□□□ 0.34
KLHDC4-223ENST00000568499 GPKOWQ92917 476 aaPredicted RBP eCLIP17.15■□□□□ 0.34
KLHDC4-223ENST00000568499 PSTPIP2Q9H939 334 aa17.15■□□□□ 0.34
KLHDC4-223ENST00000568499 SMC3Q9UQE7 1217 aa17.15■□□□□ 0.34
KLHDC4-223ENST00000568499 GCOM1H8Y6P7 765 aaPredicted RBP17.14■□□□□ 0.33
KLHDC4-223ENST00000568499 POLR2MP0CAP2 368 aa17.14■□□□□ 0.33
KLHDC4-223ENST00000568499 GNA11P29992 359 aa17.14■□□□□ 0.33
KLHDC4-223ENST00000568499 RGS2P41220 211 aa17.14■□□□□ 0.33
KLHDC4-223ENST00000568499 GRB14Q14449 540 aa17.14■□□□□ 0.33
KLHDC4-223ENST00000568499 PKN1Q16512 942 aa17.14■□□□□ 0.33
KLHDC4-223ENST00000568499 MUM1L1Q5H9M0 696 aa17.14■□□□□ 0.33
KLHDC4-223ENST00000568499 BICD2Q8TD16 824 aa17.14■□□□□ 0.33
KLHDC4-223ENST00000568499 CLEC4DQ8WXI8 215 aa17.14■□□□□ 0.33
KLHDC4-223ENST00000568499 MPHOSPH6Q99547 160 aaKnown RBP17.14■□□□□ 0.33
KLHDC4-223ENST00000568499 ARHGAP39Q9C0H5 1083 aa17.14■□□□□ 0.33
KLHDC4-223ENST00000568499 C6orf50Q9HD87 102 aa17.14■□□□□ 0.33
KLHDC4-223ENST00000568499 PRDM10Q9NQV6 1147 aa17.14■□□□□ 0.33
KLHDC4-223ENST00000568499 TRIM17Q9Y577 477 aa17.14■□□□□ 0.33
KLHDC4-223ENST00000568499 SMCO2A6NFE2 343 aa17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 POTEB2H3BUK9 544 aa17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 STXBP3O00186 592 aa17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 NFIBO00712 420 aa17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 CFBP00751 764 aa17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 ADORA2AP29274 412 aa17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 ANP32AP39687 249 aaKnown RBP17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 ADCY7P51828 1080 aa17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 NLRP5P59047 1200 aa17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 MAP2K5Q13163 448 aa17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 CUL4AQ13619 759 aa17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 SMARCC2Q8TAQ2 1214 aa17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 INTS4Q96HW7 963 aaKnown RBP17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 ALG1Q9BT22 464 aa17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 A1CFQ9NQ94 594 aaKnown RBP17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 ADD3Q9UEY8 706 aaKnown RBP17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 SRRDQ9UH36 339 aa17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 PCNTO95613 3336 aa17.13■□□□□ 0.33
KLHDC4-223ENST00000568499 COL11A1P12107 1806 aaPredicted RBP17.12■□□□□ 0.33
KLHDC4-223ENST00000568499 B4DLN1 442 aa17.12■□□□□ 0.33
KLHDC4-223ENST00000568499 JAK2O60674 1132 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms