RNA–Protein interactions for RNA: ENST00000568309.5

SIN3A-210, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-210ENST00000568309 CLDND1Q9NY35 253 aa9.68□□□□□ -0.86
SIN3A-210ENST00000568309 GNEQ9Y223 722 aaKnown RBP9.68□□□□□ -0.86
SIN3A-210ENST00000568309 EP300Q09472 2414 aaPredicted RBP9.67□□□□□ -0.86
SIN3A-210ENST00000568309 ZNF292O60281 2723 aa9.67□□□□□ -0.86
SIN3A-210ENST00000568309 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.67□□□□□ -0.86
SIN3A-210ENST00000568309 NCK2O43639 380 aa9.67□□□□□ -0.86
SIN3A-210ENST00000568309 ARID4AP29374 1257 aaPredicted RBP9.67□□□□□ -0.86
SIN3A-210ENST00000568309 DEFB103AP81534 67 aa9.67□□□□□ -0.86
SIN3A-210ENST00000568309 SMAD4Q13485 552 aaKnown RBP9.67□□□□□ -0.86
SIN3A-210ENST00000568309 RPAINQ86UA6 219 aa9.67□□□□□ -0.86
SIN3A-210ENST00000568309 ASIC4Q96FT7 647 aa9.67□□□□□ -0.86
SIN3A-210ENST00000568309 FGD4Q96M96 766 aa9.67□□□□□ -0.86
SIN3A-210ENST00000568309 C17orf80Q9BSJ5 609 aa9.67□□□□□ -0.86
SIN3A-210ENST00000568309 NSUN3Q9H649 340 aaKnown RBP9.67□□□□□ -0.86
SIN3A-210ENST00000568309 AKAP2Q9Y2D5 859 aa9.67□□□□□ -0.86
SIN3A-210ENST00000568309 TMX2Q9Y320 296 aa9.67□□□□□ -0.86
SIN3A-210ENST00000568309 MYO7AQ13402 2215 aa9.66□□□□□ -0.86
SIN3A-210ENST00000568309 KDM4AO75164 1064 aa9.66□□□□□ -0.86
SIN3A-210ENST00000568309 MCAMP43121 646 aa9.66□□□□□ -0.86
SIN3A-210ENST00000568309 DYNLL1P63167 89 aaKnown RBP9.66□□□□□ -0.86
SIN3A-210ENST00000568309 CTC1Q2NKJ3 1217 aa9.66□□□□□ -0.86
SIN3A-210ENST00000568309 MCTP2Q6DN12 878 aa9.66□□□□□ -0.86
SIN3A-210ENST00000568309 NOL8Q76FK4 1167 aaKnown RBP9.66□□□□□ -0.86
SIN3A-210ENST00000568309 SPICE1Q8N0Z3 855 aa9.66□□□□□ -0.86
SIN3A-210ENST00000568309 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.66□□□□□ -0.86
SIN3A-210ENST00000568309 COL26A1Q96A83 441 aa9.66□□□□□ -0.86
SIN3A-210ENST00000568309 AP5M1Q9H0R1 490 aa9.66□□□□□ -0.86
SIN3A-210ENST00000568309 VCPKMTQ9H867 229 aa9.66□□□□□ -0.86
SIN3A-210ENST00000568309 COPRSQ9NQ92 184 aa9.66□□□□□ -0.86
SIN3A-210ENST00000568309 PPP1R9AQ9ULJ8 1098 aa9.66□□□□□ -0.86
SIN3A-210ENST00000568309 PA2G4Q9UQ80 394 aaKnown RBP9.66□□□□□ -0.86
SIN3A-210ENST00000568309 MAP1BP46821 2468 aaKnown RBP9.66□□□□□ -0.86
SIN3A-210ENST00000568309 LOC730098B7Z3J9 87 aa9.65□□□□□ -0.86
SIN3A-210ENST00000568309 DYNC1LI2O43237 492 aaPredicted RBP9.65□□□□□ -0.86
SIN3A-210ENST00000568309 IGSF3O75054 1194 aa9.65□□□□□ -0.86
SIN3A-210ENST00000568309 GABPAQ06546 454 aa9.65□□□□□ -0.86
SIN3A-210ENST00000568309 CBX2Q14781 532 aaPredicted RBP9.65□□□□□ -0.86
SIN3A-210ENST00000568309 CLUL1Q15846 466 aa9.65□□□□□ -0.86
SIN3A-210ENST00000568309 LRRFIP1Q32MZ4 808 aaKnown RBP9.65□□□□□ -0.86
SIN3A-210ENST00000568309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.65□□□□□ -0.865e-6■■■■■ 45.5
SIN3A-210ENST00000568309 FRMD5Q7Z6J6 570 aa9.65□□□□□ -0.86
SIN3A-210ENST00000568309 SIAH1Q8IUQ4 282 aa9.65□□□□□ -0.86
SIN3A-210ENST00000568309 CCDC144CPQ8IYA2 1237 aa9.65□□□□□ -0.86
SIN3A-210ENST00000568309 SAMD11Q96NU1 681 aa9.65□□□□□ -0.86
SIN3A-210ENST00000568309 CRBNQ96SW2 442 aa9.65□□□□□ -0.86
SIN3A-210ENST00000568309 TEX13BQ9BXU2 312 aa9.65□□□□□ -0.86
SIN3A-210ENST00000568309 SH2D4AQ9H788 454 aa9.65□□□□□ -0.86
SIN3A-210ENST00000568309 FBXO28Q9NVF7 368 aa9.65□□□□□ -0.86
SIN3A-210ENST00000568309 Q9Y3F1 56 aa9.65□□□□□ -0.86
SIN3A-210ENST00000568309 CEP250Q9BV73 2442 aa9.65□□□□□ -0.86
SIN3A-210ENST00000568309 H3BNC9 293 aa9.64□□□□□ -0.87
SIN3A-210ENST00000568309 MPHOSPH10O00566 681 aaKnown RBP9.64□□□□□ -0.87
SIN3A-210ENST00000568309 SMPD1P17405 629 aa9.64□□□□□ -0.87
SIN3A-210ENST00000568309 PTGS1P23219 599 aa9.64□□□□□ -0.87
SIN3A-210ENST00000568309 USP5P45974 858 aa9.64□□□□□ -0.87
SIN3A-210ENST00000568309 PLCD1P51178 756 aa9.64□□□□□ -0.87
SIN3A-210ENST00000568309 DLX2Q07687 328 aaPredicted RBP9.64□□□□□ -0.87
SIN3A-210ENST00000568309 BFSP2Q13515 415 aa9.64□□□□□ -0.87
SIN3A-210ENST00000568309 COL9A2Q14055 689 aaPredicted RBP9.64□□□□□ -0.87
SIN3A-210ENST00000568309 PUM1Q14671 1186 aaKnown RBP eCLIP9.64□□□□□ -0.87
SIN3A-210ENST00000568309 EPC2Q52LR7 807 aa9.64□□□□□ -0.87
SIN3A-210ENST00000568309 TMEM179Q6ZVK1 233 aa9.64□□□□□ -0.87
SIN3A-210ENST00000568309 NEUROD6Q96NK8 337 aa9.64□□□□□ -0.87
SIN3A-210ENST00000568309 ARHGEF10LQ9HCE6 1279 aa9.64□□□□□ -0.87
SIN3A-210ENST00000568309 RIPK3Q9Y572 518 aa9.64□□□□□ -0.87
SIN3A-210ENST00000568309 ABHD14A-ACY1A0A1B0GW23 586 aa9.63□□□□□ -0.87
SIN3A-210ENST00000568309 UQCRFS1P1P0C7P4 283 aa9.63□□□□□ -0.87
SIN3A-210ENST00000568309 TFCP2Q12800 502 aa9.63□□□□□ -0.87
SIN3A-210ENST00000568309 GPM6BQ13491 265 aa9.63□□□□□ -0.87
SIN3A-210ENST00000568309 GPNMBQ14956 572 aa9.63□□□□□ -0.87
SIN3A-210ENST00000568309 ST3GAL2Q16842 350 aa9.63□□□□□ -0.87
SIN3A-210ENST00000568309 GORABQ5T7V8 394 aa9.63□□□□□ -0.87
SIN3A-210ENST00000568309 SNRNP48Q6IEG0 339 aaKnown RBP9.63□□□□□ -0.87
SIN3A-210ENST00000568309 CNKSR3Q6P9H4 555 aa9.63□□□□□ -0.87
SIN3A-210ENST00000568309 CERS3Q8IU89 383 aa9.63□□□□□ -0.87
SIN3A-210ENST00000568309 SP7Q8TDD2 431 aaPredicted RBP9.63□□□□□ -0.87
SIN3A-210ENST00000568309 POLR3EQ9NVU0 708 aa9.63□□□□□ -0.87
SIN3A-210ENST00000568309 CD207Q9UJ71 328 aa9.63□□□□□ -0.87
SIN3A-210ENST00000568309 INSL6Q9Y581 213 aa9.63□□□□□ -0.87
SIN3A-210ENST00000568309 SCN10AQ9Y5Y9 1956 aa9.63□□□□□ -0.87
SIN3A-210ENST00000568309 DNAH14Q0VDD8 3507 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 DMDP11532 3685 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 USP24Q9UPU5 2620 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 CFAP47Q6ZTR5 3102 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 ATP2A1O14983 1001 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 EFCAB14O75071 495 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 TBX10O75333 385 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 CXCL10P02778 98 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 PURAQ00577 322 aaKnown RBP9.62□□□□□ -0.87
SIN3A-210ENST00000568309 ICA1Q05084 483 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 FAM47CQ5HY64 1035 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 IQSEC1Q6DN90 963 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 FAM117BQ6P1L5 589 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 CLEC10AQ8IUN9 316 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 ANKRD35Q8N283 1001 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 AFAP1L1Q8TED9 768 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 RIPOR3Q96MK2 946 aa9.62□□□□□ -0.87
SIN3A-210ENST00000568309 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.62□□□□□ -0.87
SIN3A-210ENST00000568309 TRIP12Q14669 1992 aaPredicted RBP9.62□□□□□ -0.87
SIN3A-210ENST00000568309 FAM208BQ5VWN6 2430 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms