RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 SGMS1Q86VZ5 419 aa15.14■□□□□ 0.01
CNOT1-213ENST00000568158 CMTR1Q8N1G2 835 aaKnown RBP15.14■□□□□ 0.01
CNOT1-213ENST00000568158 CLEC4DQ8WXI8 215 aa15.14■□□□□ 0.01
CNOT1-213ENST00000568158 PIBF1Q8WXW3 757 aa15.14■□□□□ 0.01
CNOT1-213ENST00000568158 TBC1D5Q92609 795 aa15.14■□□□□ 0.01
CNOT1-213ENST00000568158 PURBQ96QR8 312 aaKnown RBP15.14■□□□□ 0.01
CNOT1-213ENST00000568158 MAP3K14Q99558 947 aa15.14■□□□□ 0.01
CNOT1-213ENST00000568158 RIOX1Q9H6W3 641 aa15.14■□□□□ 0.01
CNOT1-213ENST00000568158 A1CFQ9NQ94 594 aaKnown RBP15.14■□□□□ 0.01
CNOT1-213ENST00000568158 DIS3Q9Y2L1 958 aaKnown RBP15.14■□□□□ 0.01
CNOT1-213ENST00000568158 SLC12A7Q9Y666 1083 aa15.14■□□□□ 0.01
CNOT1-213ENST00000568158 WDR19Q8NEZ3 1342 aa15.14■□□□□ 0.01
CNOT1-213ENST00000568158 NFIBO00712 420 aa15.13■□□□□ 0.01
CNOT1-213ENST00000568158 DDAH1O94760 285 aa15.13■□□□□ 0.01
CNOT1-213ENST00000568158 GJB1P08034 283 aa15.13■□□□□ 0.01
CNOT1-213ENST00000568158 RPS6KB1P23443 525 aa15.13■□□□□ 0.01
CNOT1-213ENST00000568158 PSMA5P28066 241 aa15.13■□□□□ 0.01
CNOT1-213ENST00000568158 RGS19P49795 217 aa15.13■□□□□ 0.01
CNOT1-213ENST00000568158 BAATQ14032 418 aaPredicted RBP15.13■□□□□ 0.01
CNOT1-213ENST00000568158 FBXO11Q86XK2 927 aa15.13■□□□□ 0.01
CNOT1-213ENST00000568158 SRBD1Q8N5C6 995 aaKnown RBP15.13■□□□□ 0.01
CNOT1-213ENST00000568158 FANCBQ8NB91 859 aa15.13■□□□□ 0.01
CNOT1-213ENST00000568158 TRPV1Q8NER1 839 aa15.13■□□□□ 0.01
CNOT1-213ENST00000568158 CTCFLQ8NI51 663 aaPredicted RBP15.13■□□□□ 0.01
CNOT1-213ENST00000568158 MTMR8Q96EF0 704 aa15.13■□□□□ 0.01
CNOT1-213ENST00000568158 FGD4Q96M96 766 aa15.13■□□□□ 0.01
CNOT1-213ENST00000568158 DEFB118Q96PH6 123 aa15.13■□□□□ 0.01
CNOT1-213ENST00000568158 PIGSQ96S52 555 aa15.13■□□□□ 0.01
CNOT1-213ENST00000568158 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.13■□□□□ 0.015e-7■■□□□ 13.8
CNOT1-213ENST00000568158 ZSWIM6Q9HCJ5 1215 aa15.13■□□□□ 0.01
CNOT1-213ENST00000568158 PLXNA1Q9UIW2 1896 aa15.13■□□□□ 0.01
CNOT1-213ENST00000568158 MYH6P13533 1939 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 SOWAHBA6NEL2 793 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 POTEB2H3BUK9 544 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 PPP1R11O60927 126 aaPredicted RBP15.12■□□□□ 0.01
CNOT1-213ENST00000568158 PLEKHA8P1O95397 391 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 SGPL1O95470 568 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 CALM1P0DP23 149 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 CALM2P0DP24 149 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 CALM3P0DP25 149 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 CNGA1P29973 690 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 FGD1P98174 961 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 APOBRQ0VD83 1088 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 C8orf34Q49A92 452 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 SYNE3Q6ZMZ3 975 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 RUFY3Q7L099 469 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 HOMER1Q86YM7 354 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 CCDC82Q8N4S0 544 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 TINF2Q9BSI4 451 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 CYP39A1Q9NYL5 469 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 ZNF236Q9UL36 1845 aa15.12■□□□□ 0.01
CNOT1-213ENST00000568158 KLF18A0A0U1RQI7 1052 aa15.11■□□□□ 0.01
CNOT1-213ENST00000568158 ZBTB5O15062 677 aa15.11■□□□□ 0.01
CNOT1-213ENST00000568158 TFRCP02786 760 aaKnown RBP15.11■□□□□ 0.01
CNOT1-213ENST00000568158 KIF5BP33176 963 aa15.11■□□□□ 0.01
CNOT1-213ENST00000568158 GJA8P48165 433 aa15.11■□□□□ 0.01
CNOT1-213ENST00000568158 APOA5Q6Q788 366 aa15.11■□□□□ 0.01
CNOT1-213ENST00000568158 MICU3Q86XE3 530 aa15.11■□□□□ 0.01
CNOT1-213ENST00000568158 FAM133AQ8N9E0 248 aa15.11■□□□□ 0.01
CNOT1-213ENST00000568158 U2AF1L4Q8WU68 220 aaKnown RBP15.11■□□□□ 0.01
CNOT1-213ENST00000568158 BRF1Q92994 677 aa15.11■□□□□ 0.01
CNOT1-213ENST00000568158 LARP6Q9BRS8 491 aaKnown RBP15.11■□□□□ 0.01
CNOT1-213ENST00000568158 PAK6Q9NQU5 681 aaPredicted RBP15.11■□□□□ 0.01
CNOT1-213ENST00000568158 PNMA2Q9UL42 364 aa15.11■□□□□ 0.01
CNOT1-213ENST00000568158 NAP1L2Q9ULW6 460 aaPredicted RBP15.11■□□□□ 0.01
CNOT1-213ENST00000568158 DDX49Q9Y6V7 483 aaKnown RBP15.11■□□□□ 0.01
CNOT1-213ENST00000568158 PTPDC1A2A3K4 754 aa15.1■□□□□ 0.01
CNOT1-213ENST00000568158 ZBTB43O43298 467 aa15.1■□□□□ 0.01
CNOT1-213ENST00000568158 SNAI1O95863 264 aaPredicted RBP15.1■□□□□ 0.01
CNOT1-213ENST00000568158 CALML3P27482 149 aa15.1■□□□□ 0.01
CNOT1-213ENST00000568158 GNAQP50148 359 aa15.1■□□□□ 0.01
CNOT1-213ENST00000568158 SHISA4Q96DD7 197 aa15.1■□□□□ 0.01
CNOT1-213ENST00000568158 AMNQ9BXJ7 453 aa15.1■□□□□ 0.01
CNOT1-213ENST00000568158 UPF3BQ9BZI7 483 aaKnown RBP15.1■□□□□ 0.01
CNOT1-213ENST00000568158 TM6SF1Q9BZW5 370 aa15.1■□□□□ 0.01
CNOT1-213ENST00000568158 CYP46A1Q9Y6A2 500 aa15.1■□□□□ 0.01
CNOT1-213ENST00000568158 ABCB11O95342 1321 aa15.1■□□□□ 0.01
CNOT1-213ENST00000568158 PNMA6FA0A0J9YX94 578 aa15.09■□□□□ 0.01
CNOT1-213ENST00000568158 hCG_1642624A0A1W2PR95 340 aa15.09■□□□□ 0.01
CNOT1-213ENST00000568158 CYBAP13498 195 aa15.09■□□□□ 0.01
CNOT1-213ENST00000568158 SMARCA1P28370 1054 aa15.09■□□□□ 0.01
CNOT1-213ENST00000568158 CDC27P30260 824 aa15.09■□□□□ 0.01
CNOT1-213ENST00000568158 RPS6P62753 249 aaKnown RBP15.09■□□□□ 0.01
CNOT1-213ENST00000568158 ANO1Q5XXA6 986 aa15.09■□□□□ 0.01
CNOT1-213ENST00000568158 LHX8Q68G74 356 aa15.09■□□□□ 0.01
CNOT1-213ENST00000568158 MAMDC4Q6UXC1 1216 aa15.09■□□□□ 0.01
CNOT1-213ENST00000568158 SLC30A10Q6XR72 485 aa15.09■□□□□ 0.01
CNOT1-213ENST00000568158 RNF207Q6ZRF8 634 aa15.09■□□□□ 0.01
CNOT1-213ENST00000568158 LZTS2Q9BRK4 669 aa15.09■□□□□ 0.01
CNOT1-213ENST00000568158 SPZ1Q9BXG8 430 aa15.09■□□□□ 0.01
CNOT1-213ENST00000568158 AGXT2Q9BYV1 514 aa15.09■□□□□ 0.01
CNOT1-213ENST00000568158 FAM217BQ9NTX9 383 aaPredicted RBP15.09■□□□□ 0.01
CNOT1-213ENST00000568158 MRPL11Q9Y3B7 192 aaKnown RBP15.09■□□□□ 0.01
CNOT1-213ENST00000568158 PCDHA1Q9Y5I3 950 aa15.09■□□□□ 0.01
CNOT1-213ENST00000568158 PFASO15067 1338 aa15.09■□□□□ 0.01
CNOT1-213ENST00000568158 MCM3APO60318 1980 aa15.08■□□□□ 0
CNOT1-213ENST00000568158 ADD1P35611 737 aaKnown RBP15.08■□□□□ 0
CNOT1-213ENST00000568158 TOB2Q14106 344 aaPredicted RBP15.08■□□□□ 0
CNOT1-213ENST00000568158 TMTC3Q6ZXV5 915 aa15.08■□□□□ 0
CNOT1-213ENST00000568158 ZNF467Q7Z7K2 595 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms