RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 TMEM87BQ96K49 555 aa9.57□□□□□ -0.88
HDGFL3-205ENST00000568129 UBA5Q9GZZ9 404 aa9.57□□□□□ -0.88
HDGFL3-205ENST00000568129 ABHD16BQ9H3Z7 469 aa9.57□□□□□ -0.88
HDGFL3-205ENST00000568129 JMJD4Q9H9V9 463 aa9.57□□□□□ -0.88
HDGFL3-205ENST00000568129 LY9Q9HBG7 655 aa9.57□□□□□ -0.88
HDGFL3-205ENST00000568129 SENP2Q9HC62 589 aa9.57□□□□□ -0.88
HDGFL3-205ENST00000568129 CCPG1Q9ULG6 757 aa9.57□□□□□ -0.88
HDGFL3-205ENST00000568129 ASB14A6NK59 587 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 KLRF2D3W0D1 207 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 POTEB2H3BUK9 544 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 IFIT3O14879 490 aaKnown RBP9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 ADAMTS4O75173 837 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 NEFLP07196 543 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 GOLGA8HP0CJ92 632 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 MCM5P33992 734 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 EXOSC10Q01780 885 aaKnown RBP9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 ACVR2BQ13705 512 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 SART3Q15020 963 aaKnown RBP9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 SNX17Q15036 470 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 CCSAPQ6IQ19 270 aaPredicted RBP9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 CCDC174Q6PII3 467 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 ARMCX2Q7L311 632 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 RALYLQ86SE5 291 aaKnown RBP9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 CCDC144CPQ8IYA2 1237 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 FBXL16Q8N461 479 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 ARRDC4Q8NCT1 418 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 KLHDC9Q8NEP7 349 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 PRO3102Q9H379 93 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 C11orf49Q9H6J7 331 aa9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.56□□□□□ -0.88
HDGFL3-205ENST00000568129 RBM47A0AV96 593 aaKnown RBP9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 NFIBO00712 420 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 CYTH3O43739 400 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 DUSP11O75319 330 aaKnown RBP9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 AKR1A1P14550 325 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 EDNRBP24530 442 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 CST5P28325 142 aaPredicted RBP9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 BAATQ14032 418 aaPredicted RBP9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 WTAPQ15007 396 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 LRRC41Q15345 812 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 QRICH1Q2TAL8 776 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 RNF20Q5VTR2 975 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 TAPT1Q6NXT6 567 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 CASC1Q6TDU7 716 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 SGMS1Q86VZ5 419 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 RASEFQ8IZ41 740 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 DNERQ8NFT8 737 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 CHMP4CQ96CF2 233 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 TSEN34Q9BSV6 310 aaKnown RBP9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 UPF3AQ9H1J1 476 aaKnown RBP9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 CPVLQ9H3G5 476 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 ANO2Q9NQ90 1003 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 HOMER2Q9NSB8 354 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 MAP3K20Q9NYL2 800 aaKnown RBP9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 FAM184BQ9ULE4 1060 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 MTMR7Q9Y216 660 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 CNPY2Q9Y2B0 182 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 Q9Y3F1 56 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 ABCB11O95342 1321 aa9.55□□□□□ -0.88
HDGFL3-205ENST00000568129 ERICH2A1L162 156 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 SH2B2O14492 632 aaPredicted RBP9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 OPLAHO14841 1288 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 ZBTB5O15062 677 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 CTAGE5O15320 804 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 ADCY6O43306 1168 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 PRC1O43663 620 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 DDAH1O94760 285 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 CENPBP07199 599 aaPredicted RBP9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 RARBP10826 455 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 CNGA1P29973 690 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 HSPA4P34932 840 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 GJA9P57773 515 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 RPS6P62753 249 aaKnown RBP9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 CDC37Q16543 378 aaPredicted RBP9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 TMEM67Q5HYA8 995 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 IQSEC1Q6DN90 963 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 CHST3Q7LGC8 479 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 DPF3Q92784 378 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 SPZ1Q9BXG8 430 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 PHF24Q9UPV7 400 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 GNEQ9Y223 722 aaKnown RBP9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 LTBP2Q14767 1821 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 SCN10AQ9Y5Y9 1956 aa9.54□□□□□ -0.88
HDGFL3-205ENST00000568129 H0YGN5 161 aa9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 PPP1R11O60927 126 aaPredicted RBP9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 SLC4A3P48751 1232 aa9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 ALDH5A1P51649 535 aaPredicted RBP9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 HSD17B4P51659 736 aa9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 KRT32Q14532 448 aa9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 LRRC26Q2I0M4 334 aa9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 ADCK5Q3MIX3 580 aa9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 CCDC144BQ3MJ40 725 aa9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 NSMFQ6X4W1 530 aa9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 SLC39A5Q6ZMH5 540 aa9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 RNF207Q6ZRF8 634 aa9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 DHX32Q7L7V1 743 aaKnown RBP9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 CATIPQ7Z7H3 387 aa9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 FBXO11Q86XK2 927 aa9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 MCF2L2Q86YR7 1114 aa9.53□□□□□ -0.88
HDGFL3-205ENST00000568129 ZNF654Q8IZM8 581 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms