RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 LRRC15Q8TF66 581 aa15.93■□□□□ 0.14
CDH1-209ENST00000566510 TGFBRAP1Q8WUH2 860 aa15.93■□□□□ 0.14
CDH1-209ENST00000566510 HPS3Q969F9 1004 aa15.93■□□□□ 0.14
CDH1-209ENST00000566510 CNOT6LQ96LI5 555 aaKnown RBP15.93■□□□□ 0.14
CDH1-209ENST00000566510 FCER1AP12319 257 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 TECP42680 631 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 STK4Q13043 487 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 GRM4Q14833 912 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 LINC00116Q8NCU8 138 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 SETDB2Q96T68 719 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 LACRTQ9GZZ8 138 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 ACBD3Q9H3P7 528 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 BARHL2Q9NY43 387 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 ANKIB1Q9P2G1 1089 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 SCN7AQ01118 1682 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 STXBP3O00186 592 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 ZNF185O15231 689 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 LDHBP07195 334 aaKnown RBP15.92■□□□□ 0.14
CDH1-209ENST00000566510 SRGNP10124 158 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 P2RX5Q93086 422 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 DUSP9Q99956 384 aaKnown RBP15.92■□□□□ 0.14
CDH1-209ENST00000566510 CDCA7Q9BWT1 371 aaPredicted RBP15.92■□□□□ 0.14
CDH1-209ENST00000566510 CCSER1Q9C0I3 900 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 ANKRD2Q9GZV1 360 aa15.92■□□□□ 0.14
CDH1-209ENST00000566510 CWC15Q9P013 229 aaKnown RBP15.92■□□□□ 0.14
CDH1-209ENST00000566510 RCCD1A6NED2 376 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 KLRF2D3W0D1 207 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 M0R2N6 131 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 TUBBP07437 444 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 ERCC3P19447 782 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 SLC35G1Q2M3R5 365 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 SPTY2D1Q68D10 685 aaPredicted RBP15.91■□□□□ 0.14
CDH1-209ENST00000566510 GOLGA5Q8TBA6 731 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 DHTKD1Q96HY7 919 aaPredicted RBP15.91■□□□□ 0.14
CDH1-209ENST00000566510 SRP68Q9UHB9 627 aaKnown RBP15.91■□□□□ 0.14
CDH1-209ENST00000566510 CCDC88AQ3V6T2 1871 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 LAMB1P07942 1786 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 SPATA31A1Q5TZJ5 1347 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 BICDL2A1A5D9 508 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 MYL1P05976 194 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 IDEP14735 1019 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 ACTN2P35609 894 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 MAPKAPK5Q8IW41 473 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 EHBP1Q8NDI1 1231 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 TMEM47Q9BQJ4 181 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 PSD3Q9NYI0 1048 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 OR52Z1P0C646 297 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 USP14P54578 494 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 CCDC96Q2M329 555 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 WDR93Q6P2C0 686 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 SMARCC1Q92922 1105 aaPredicted RBP15.91■□□□□ 0.14
CDH1-209ENST00000566510 DRC1Q96MC2 740 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 TRIM9Q9C026 710 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 SLC39A2Q9NP94 309 aa15.91■□□□□ 0.14
CDH1-209ENST00000566510 SMCO2A6NFE2 343 aa15.9■□□□□ 0.14
CDH1-209ENST00000566510 CCNE1P24864 410 aa15.9■□□□□ 0.14
CDH1-209ENST00000566510 KIF5AQ12840 1032 aa15.9■□□□□ 0.14
CDH1-209ENST00000566510 MUM1L1Q5H9M0 696 aa15.9■□□□□ 0.14
CDH1-209ENST00000566510 FKBP15Q5T1M5 1219 aa15.9■□□□□ 0.14
CDH1-209ENST00000566510 SLC51AQ86UW1 340 aa15.9■□□□□ 0.14
CDH1-209ENST00000566510 GOLGA6L1Q8N7Z2 621 aa15.9■□□□□ 0.14
CDH1-209ENST00000566510 NOC3LQ8WTT2 800 aaKnown RBP15.9■□□□□ 0.14
CDH1-209ENST00000566510 CCDC42Q96M95 316 aa15.9■□□□□ 0.14
CDH1-209ENST00000566510 NUP58Q9BVL2 599 aa15.9■□□□□ 0.14
CDH1-209ENST00000566510 LAD1O00515 517 aa15.9■□□□□ 0.14
CDH1-209ENST00000566510 NKRFO15226 690 aaKnown RBP eCLIP15.9■□□□□ 0.14
CDH1-209ENST00000566510 ZBED6P86452 979 aa15.9■□□□□ 0.14
CDH1-209ENST00000566510 SPA17Q15506 151 aa15.9■□□□□ 0.14
CDH1-209ENST00000566510 KRT26Q7Z3Y9 468 aa15.9■□□□□ 0.14
CDH1-209ENST00000566510 FAM114A1Q8IWE2 563 aa15.9■□□□□ 0.14
CDH1-209ENST00000566510 GSPT2Q8IYD1 628 aaKnown RBP15.9■□□□□ 0.14
CDH1-209ENST00000566510 FAM71BQ8TC56 605 aa15.9■□□□□ 0.14
CDH1-209ENST00000566510 MYH10P35580 1976 aa15.89■□□□□ 0.13
CDH1-209ENST00000566510 NUTM2BA6NNL0 878 aaPredicted RBP15.89■□□□□ 0.13
CDH1-209ENST00000566510 NUTM2EB1AL46 878 aaPredicted RBP15.89■□□□□ 0.13
CDH1-209ENST00000566510 PLEKP08567 350 aaPredicted RBP15.89■□□□□ 0.13
CDH1-209ENST00000566510 TXKP42681 527 aa15.89■□□□□ 0.13
CDH1-209ENST00000566510 NONOQ15233 471 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDH1-209ENST00000566510 MEA1Q16626 185 aa15.89■□□□□ 0.13
CDH1-209ENST00000566510 MAP9Q49MG5 647 aa15.89■□□□□ 0.13
CDH1-209ENST00000566510 GALNT17Q6IS24 598 aa15.89■□□□□ 0.13
CDH1-209ENST00000566510 USP17L2Q6R6M4 530 aa15.89■□□□□ 0.13
CDH1-209ENST00000566510 SMCR8Q8TEV9 937 aaPredicted RBP15.89■□□□□ 0.13
CDH1-209ENST00000566510 FAM204AQ9H8W3 233 aa15.89■□□□□ 0.13
CDH1-209ENST00000566510 LRWD1Q9UFC0 647 aa15.89■□□□□ 0.13
CDH1-209ENST00000566510 MYH1P12882 1939 aa15.89■□□□□ 0.13
CDH1-209ENST00000566510 RASSF10A6NK89 507 aa15.89■□□□□ 0.13
CDH1-209ENST00000566510 TULP2O00295 520 aa15.89■□□□□ 0.13
CDH1-209ENST00000566510 BAG3O95817 575 aa15.89■□□□□ 0.13
CDH1-209ENST00000566510 CKAP4Q07065 602 aaKnown RBP15.89■□□□□ 0.13
CDH1-209ENST00000566510 SOGA3Q5TF21 947 aa15.89■□□□□ 0.13
CDH1-209ENST00000566510 PAPD7Q5XG87 772 aaKnown RBP15.89■□□□□ 0.13
CDH1-209ENST00000566510 NYXQ9GZU5 481 aa15.89■□□□□ 0.13
CDH1-209ENST00000566510 FAM207AQ9NSI2 230 aaPredicted RBP15.89■□□□□ 0.13
CDH1-209ENST00000566510 BIN2Q9UBW5 565 aaPredicted RBP15.89■□□□□ 0.13
CDH1-209ENST00000566510 CASZ1Q86V15 1759 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 PRPHP41219 470 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 AMPD3Q01432 767 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 SKIDA1Q1XH10 827 aa15.88■□□□□ 0.13
CDH1-209ENST00000566510 SECISBP2LQ93073 1101 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms