RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 BPIFA3Q9BQP9 254 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 SDF4Q9BRK5 362 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 AMNQ9BXJ7 453 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 MFRPQ9BY79 579 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 FHDC1Q9C0D6 1143 aaPredicted RBP10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 HACL1Q9UJ83 578 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 PNMA2Q9UL42 364 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 MTMR7Q9Y216 660 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 ATAD5Q96QE3 1844 aa10.09□□□□□ -0.79
LSM3P5-201ENST00000566307 SHTN1A0MZ66 631 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 USP17L10C9JJH3 530 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 WNT7AO00755 349 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 ADAMTS3O15072 1205 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 SLC26A4O43511 780 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 PPP1R11O60927 126 aaPredicted RBP10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 GCFC2P16383 781 aaKnown RBP10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 SEMA3FQ13275 785 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 ZNF174Q15697 407 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 CAMK4Q16566 473 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 SHROOM1Q2M3G4 852 aaPredicted RBP10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 HS1BP3Q53T59 392 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 NOM1Q5C9Z4 860 aaKnown RBP10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 CT47A1Q5JQC4 288 aaPredicted RBP10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 NT5DC1Q5TFE4 455 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 PPP4R3AQ6IN85 833 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 KCTD1Q719H9 257 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 CKAP2LQ8IYA6 745 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 TRIML1Q8N9V2 468 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 CHURC1Q8WUH1 139 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 PIBF1Q8WXW3 757 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 AK8Q96MA6 479 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 CLIC6Q96NY7 704 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 SYT17Q9BSW7 474 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 WDR18Q9BV38 432 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 ZNF341Q9BYN7 854 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 KIAA1683Q9H0B3 1180 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 CSRNP2Q9H175 543 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 DEFB129Q9H1M3 183 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 CPVLQ9H3G5 476 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 VAT1LQ9HCJ6 419 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 METRNQ9UJH8 293 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 DOCK1Q14185 1865 aa10.08□□□□□ -0.8
LSM3P5-201ENST00000566307 PIK3CDO00329 1044 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 WDR46O15213 610 aaKnown RBP10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 ACTN4O43707 911 aaKnown RBP10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 EGFRP00533 1210 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 FOSP01100 380 aaPredicted RBP10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 SLFN14P0C7P3 912 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 FDX1P10109 184 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 STAT2P52630 851 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 MDM2Q00987 491 aaPredicted RBP10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 INF2Q27J81 1249 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 NOL9Q5SY16 702 aaKnown RBP10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 ARHGAP27Q6ZUM4 889 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 SAMD7Q7Z3H4 446 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 SH3RF1Q7Z6J0 888 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 FBXO11Q86XK2 927 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 CDAN1Q8IWY9 1227 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 SAMD3Q8N6K7 520 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 SPATA20Q8TB22 786 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 COA7Q96BR5 231 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 MBOAT7Q96N66 472 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 PANK2Q9BZ23 570 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 CCSER1Q9C0I3 900 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 NAT10Q9H0A0 1025 aaKnown RBP10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 RANBP17Q9H2T7 1088 aaKnown RBP10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 PSTPIP2Q9H939 334 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 FEM1BQ9UK73 627 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 PCDHA1Q9Y5I3 950 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 GJA3Q9Y6H8 435 aa10.07□□□□□ -0.8
LSM3P5-201ENST00000566307 CYP3A7-CYP3A51PA0A087WV96 503 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 TMEM232C9JQI7 657 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 MYL1P05976 194 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 OR52Z1P0C646 297 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 ATP2B1P20020 1258 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 CYP3A7P24462 503 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 MCM7P33993 719 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 SLC16A2P36021 539 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 SARSP49591 514 aaKnown RBP10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 USP11P51784 963 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 USP14P54578 494 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 NLRP12P59046 1061 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 GHRHRQ02643 423 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 GRIN1Q05586 938 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 IQCB1Q15051 598 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 TBC1D10BQ4KMP7 808 aaPredicted RBP10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 DTHD1Q6ZMT9 781 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 CEP57L1Q8IYX8 460 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 CNNM3Q8NE01 707 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 RASGRP4Q8TDF6 673 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 ACER1Q8TDN7 264 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 TBCKQ8TEA7 893 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 CRYGNQ8WXF5 182 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 KIF12Q96FN5 646 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 L3MBTL3Q96JM7 780 aaPredicted RBP10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 MAF1Q9H063 256 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 CUEDC2Q9H467 287 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 MAGEF1Q9HAY2 307 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 PRR12Q9ULL5 1215 aa10.06□□□□□ -0.8
LSM3P5-201ENST00000566307 NEMFO60524 1076 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms