RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 MYCBPQ99417 103 aaPredicted RBP22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 SNX12Q9UMY4 172 aa22.83■■□□□ 1.25
MAP1LC3B-206ENST00000564844 TARSL2A2RTX5 802 aaKnown RBP22.83■■□□□ 1.24
MAP1LC3B-206ENST00000564844 USP17L12C9JPN9 530 aa22.83■■□□□ 1.24
MAP1LC3B-206ENST00000564844 USP17L21D6R901 530 aa22.83■■□□□ 1.24
MAP1LC3B-206ENST00000564844 ARID5AQ03989 594 aa22.83■■□□□ 1.24
MAP1LC3B-206ENST00000564844 STK4Q13043 487 aa22.83■■□□□ 1.24
MAP1LC3B-206ENST00000564844 INF2Q27J81 1249 aa22.83■■□□□ 1.24
MAP1LC3B-206ENST00000564844 IQCA1Q86XH1 822 aa22.83■■□□□ 1.24
MAP1LC3B-206ENST00000564844 OTUD6BQ8N6M0 293 aa22.83■■□□□ 1.24
MAP1LC3B-206ENST00000564844 HSF2BPO75031 334 aa22.82■■□□□ 1.24
MAP1LC3B-206ENST00000564844 EIF4A3P38919 411 aaKnown RBP22.82■■□□□ 1.24
MAP1LC3B-206ENST00000564844 RASSF7Q02833 373 aa22.82■■□□□ 1.24
MAP1LC3B-206ENST00000564844 PDE4DQ08499 809 aa22.82■■□□□ 1.24
MAP1LC3B-206ENST00000564844 UIMC1Q96RL1 719 aa22.82■■□□□ 1.24
MAP1LC3B-206ENST00000564844 RMND1Q9NWS8 449 aa22.82■■□□□ 1.24
MAP1LC3B-206ENST00000564844 SLIT3O75094 1523 aa22.82■■□□□ 1.24
MAP1LC3B-206ENST00000564844 MAGEB6P1A0A0J9YX57 407 aa22.82■■□□□ 1.24
MAP1LC3B-206ENST00000564844 DNM2P50570 870 aa22.82■■□□□ 1.24
MAP1LC3B-206ENST00000564844 TNFRSF25Q93038 417 aa22.82■■□□□ 1.24
MAP1LC3B-206ENST00000564844 OSBPL9Q96SU4 736 aa22.82■■□□□ 1.24
MAP1LC3B-206ENST00000564844 KANSL2Q9H9L4 492 aa22.82■■□□□ 1.24
MAP1LC3B-206ENST00000564844 CD248Q9HCU0 757 aa22.82■■□□□ 1.24
MAP1LC3B-206ENST00000564844 SLC39A2Q9NP94 309 aa22.82■■□□□ 1.24
MAP1LC3B-206ENST00000564844 MYH7P12883 1935 aa22.81■■□□□ 1.24
MAP1LC3B-206ENST00000564844 CYP2D6P10635 497 aa22.81■■□□□ 1.24
MAP1LC3B-206ENST00000564844 CT47A1Q5JQC4 288 aaPredicted RBP22.81■■□□□ 1.24
MAP1LC3B-206ENST00000564844 PIGBQ92521 554 aa22.81■■□□□ 1.24
MAP1LC3B-206ENST00000564844 RNPC3Q96LT9 517 aaKnown RBP22.81■■□□□ 1.24
MAP1LC3B-206ENST00000564844 TJP1Q07157 1748 aa22.81■■□□□ 1.24
MAP1LC3B-206ENST00000564844 SHOX2O60902 331 aaPredicted RBP22.81■■□□□ 1.24
MAP1LC3B-206ENST00000564844 TACC1O75410 805 aa22.81■■□□□ 1.24
MAP1LC3B-206ENST00000564844 GUCY2DQ02846 1103 aa22.81■■□□□ 1.24
MAP1LC3B-206ENST00000564844 C8orf74Q6P047 294 aa22.81■■□□□ 1.24
MAP1LC3B-206ENST00000564844 RRAGAQ7L523 313 aa22.81■■□□□ 1.24
MAP1LC3B-206ENST00000564844 DUSP9Q99956 384 aaKnown RBP22.81■■□□□ 1.24
MAP1LC3B-206ENST00000564844 DISC1Q9NRI5 854 aa22.81■■□□□ 1.24
MAP1LC3B-206ENST00000564844 PCDH11XQ9BZA7 1347 aa22.81■■□□□ 1.24
MAP1LC3B-206ENST00000564844 PCDH11YQ9BZA8 1340 aa22.81■■□□□ 1.24
MAP1LC3B-206ENST00000564844 KIAA0754O94854 1291 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 DNAAF5Q86Y56 855 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 EHBP1Q8NDI1 1231 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 EPB41L5Q9HCM4 733 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 NLRC4Q9NPP4 1024 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 PCDHA13Q9Y5I0 950 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 USP54Q70EL1 1684 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 GLI1P08151 1106 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 ASIC1P78348 528 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 GFPT1Q06210 699 aaPredicted RBP22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 DTHD1Q6ZMT9 781 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 PPANQ9NQ55 473 aaKnown RBP22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 ARHGAP20Q9P2F6 1191 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 MYH2Q9UKX2 1941 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 PDE8AO60658 829 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 VAV2P52735 878 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 BICDL1Q6ZP65 573 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 TMTC3Q6ZXV5 915 aa22.8■■□□□ 1.24
MAP1LC3B-206ENST00000564844 SPEF2Q9C093 1822 aa22.79■■□□□ 1.24
MAP1LC3B-206ENST00000564844 SRGNP10124 158 aa22.79■■□□□ 1.24
MAP1LC3B-206ENST00000564844 SCG2P13521 617 aa22.79■■□□□ 1.24
MAP1LC3B-206ENST00000564844 IL2RBP14784 551 aa22.79■■□□□ 1.24
MAP1LC3B-206ENST00000564844 TDRD12Q587J7 1177 aaKnown RBP22.79■■□□□ 1.24
MAP1LC3B-206ENST00000564844 PDS5AQ29RF7 1337 aaKnown RBP22.79■■□□□ 1.24
MAP1LC3B-206ENST00000564844 FTCDO95954 541 aa22.79■■□□□ 1.24
MAP1LC3B-206ENST00000564844 HAUS3Q68CZ6 603 aa22.79■■□□□ 1.24
MAP1LC3B-206ENST00000564844 TTI2Q6NXR4 508 aa22.79■■□□□ 1.24
MAP1LC3B-206ENST00000564844 PLA2G12BQ9BX93 195 aa22.79■■□□□ 1.24
MAP1LC3B-206ENST00000564844 TANGO6Q9C0B7 1094 aa22.79■■□□□ 1.24
MAP1LC3B-206ENST00000564844 TMEM94Q12767 1356 aa22.79■■□□□ 1.24
MAP1LC3B-206ENST00000564844 RTL9Q8NET4 1388 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 FGFR2P21802 821 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 IFT88Q13099 833 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 STAG2Q8N3U4 1231 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 STIM2Q9P246 746 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 BCCIPQ9P287 314 aaKnown RBP eCLIP22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 ERVV-2B6SEH9 535 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 USO1O60763 962 aaKnown RBP22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 ECM2O94769 699 aaPredicted RBP22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 STARD3NLO95772 234 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 BMP15O95972 392 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 KIF11P52732 1056 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 ZBED6P86452 979 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 MAATS1Q7Z4T9 603 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 AMOTL1Q8IY63 956 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 RPGRIP1Q96KN7 1286 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 GEMIN8Q9NWZ8 242 aaKnown RBP22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 OPA1O60313 960 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 TRIM28Q13263 835 aaKnown RBP22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 IQCEQ6IPM2 695 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 EP400NLQ6ZTU2 488 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 DYMQ7RTS9 669 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 OR2W6PQ8NHA6 318 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 ZNF512BQ96KM6 892 aaPredicted RBP22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 ATRNO75882 1429 aa22.78■■□□□ 1.24
MAP1LC3B-206ENST00000564844 MYH6P13533 1939 aa22.77■■□□□ 1.24
MAP1LC3B-206ENST00000564844 CNTNAP5Q8WYK1 1306 aa22.77■■□□□ 1.24
MAP1LC3B-206ENST00000564844 EEF1GP26641 437 aaKnown RBP22.77■■□□□ 1.24
MAP1LC3B-206ENST00000564844 MAGEA1P43355 309 aa22.77■■□□□ 1.24
MAP1LC3B-206ENST00000564844 ACTN3Q08043 901 aaPredicted RBP22.77■■□□□ 1.24
MAP1LC3B-206ENST00000564844 CFAP58Q5T655 872 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms