RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	TNFRSF25	Q93038	417 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	COA7	Q96BR5	231 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	P2RX7	Q99572	595 aa	Known RBP	11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	PTPN18	Q99952	460 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	GLT8D2	Q9H1C3	349 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	FOXP1	Q9H334	677 aa	Predicted RBP	11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	PCDHA4	Q9UN74	947 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	KCNJ14	Q9UNX9	436 aa		11.32	□□□□□ -0.6
SIN3A-205	ENST00000564778	MYH15	Q9Y2K3	1946 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778		M0R2N6	131 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	PDHX	O00330	501 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	OPLAH	O14841	1288 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	GNA11	P29992	359 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	KRT2	P35908	639 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	NLRP5	P59047	1200 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	SNAP25	P60880	206 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	SREBF2	Q12772	1141 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	TMEM132B	Q14DG7	1078 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	TKFC	Q3LXA3	575 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	BRAP	Q7Z569	592 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	REM2	Q8IYK8	340 aa	Predicted RBP	11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	FAM43A	Q8N2R8	423 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	BICD2	Q8TD16	824 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	PARK7	Q99497	189 aa	Known RBP	11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	TEX13B	Q9BXU2	312 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	MAF1	Q9H063	256 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	BRMS1	Q9HCU9	246 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	C6orf50	Q9HD87	102 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	RIC8A	Q9NPQ8	531 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	CCPG1	Q9ULG6	757 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	MRPL11	Q9Y3B7	192 aa	Known RBP	11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	ADGRA2	Q96PE1	1338 aa		11.31	□□□□□ -0.6
SIN3A-205	ENST00000564778	SMCO2	A6NFE2	343 aa		11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	KIF28P	B7ZC32	967 aa		11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	PIK3CD	O00329	1044 aa		11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	CNMD	O75829	334 aa		11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	CLK2	P49760	499 aa	Known RBP	11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	ADCY7	P51828	1080 aa		11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	USH1G	Q495M9	461 aa		11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.3	□□□□□ -0.6	5e-6	■■■■■ 45.5
SIN3A-205	ENST00000564778	RIOX2	Q8IUF8	465 aa		11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	NOSTRIN	Q8IVI9	506 aa		11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	BLID	Q8IZY5	108 aa		11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	CUL5	Q93034	780 aa		11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	AGBL1	Q96MI9	1066 aa		11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	RAVER2	Q9HCJ3	691 aa	Known RBP	11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	PRDM10	Q9NQV6	1147 aa		11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	RABGAP1	Q9Y3P9	1069 aa		11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.3	□□□□□ -0.6
SIN3A-205	ENST00000564778	BTBD18	B2RXH4	712 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	CYP2C8	P10632	490 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	TAL1	P17542	331 aa	Predicted RBP	11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	COPB2	P35606	906 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	TM4SF4	P48230	202 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	GCLC	P48506	637 aa	Predicted RBP	11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	MRPL12	P52815	198 aa	Known RBP	11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	NR5A1	Q13285	461 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	SNRNP48	Q6IEG0	339 aa	Known RBP	11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	CLEC17A	Q6ZS10	378 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	FERMT3	Q86UX7	667 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	IFNL1	Q8IU54	200 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	REXO1	Q8N1G1	1221 aa	Known RBP	11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	SAMD3	Q8N6K7	520 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	OXER1	Q8TDS5	423 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	CLEC4D	Q8WXI8	215 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	TNPO1	Q92973	898 aa	Known RBP	11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	SPATC1L	Q9H0A9	340 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	PSTPIP2	Q9H939	334 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	BTBD7	Q9P203	1132 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	RBPJL	Q9UBG7	517 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	MORF4L1	Q9UBU8	362 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	ATP6V1D	Q9Y5K8	247 aa		11.29	□□□□□ -0.6
SIN3A-205	ENST00000564778	MEIS2	O14770	477 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	ADAMTS3	O15072	1205 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	HSPA8	P11142	646 aa	Known RBP	11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	STAT3	P40763	770 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	HSD17B4	P51659	736 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	LBX1	P52954	281 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	AP3B2	Q13367	1082 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	MYSM1	Q5VVJ2	828 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	MCTP2	Q6DN12	878 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	MCTP1	Q6DN14	999 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	KRT25	Q7Z3Z0	450 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	MCF2L2	Q86YR7	1114 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	CPXCR1	Q8N123	301 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	SHCBP1	Q8NEM2	672 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	CHST13	Q8NET6	341 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	TXNRD2	Q9NNW7	524 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	RNF146	Q9NTX7	359 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	MAP3K20	Q9NYL2	800 aa	Known RBP	11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	PCDHA6	Q9UN73	950 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	RIPK3	Q9Y572	518 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	PCDHA8	Q9Y5H6	950 aa		11.28	□□□□□ -0.6
SIN3A-205	ENST00000564778	NFIB	O00712	420 aa		11.27	□□□□□ -0.61
SIN3A-205	ENST00000564778	SLC25A27	O95847	323 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms