RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 ZNF444Q8N0Y2 327 aaPredicted RBP17.33■□□□□ 0.36
GTF3C1-205ENST00000564747 EXOC4Q96A65 974 aa17.33■□□□□ 0.36
GTF3C1-205ENST00000564747 FLT1P17948 1338 aa17.33■□□□□ 0.36
GTF3C1-205ENST00000564747 PALM3A6NDB9 673 aaPredicted RBP17.33■□□□□ 0.36
GTF3C1-205ENST00000564747 LDHBP07195 334 aaKnown RBP17.33■□□□□ 0.36
GTF3C1-205ENST00000564747 TBC1D8BQ0IIM8 1120 aa17.33■□□□□ 0.36
GTF3C1-205ENST00000564747 MMS19Q96T76 1030 aa17.33■□□□□ 0.36
GTF3C1-205ENST00000564747 TTYH3Q9C0H2 523 aa17.33■□□□□ 0.36
GTF3C1-205ENST00000564747 LACRTQ9GZZ8 138 aa17.33■□□□□ 0.36
GTF3C1-205ENST00000564747 EXOC1Q9NV70 894 aa17.33■□□□□ 0.36
GTF3C1-205ENST00000564747 SAP30BPQ9UHR5 308 aaKnown RBP17.33■□□□□ 0.36
GTF3C1-205ENST00000564747 CCNT1O60563 726 aaKnown RBP17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 FCER1AP12319 257 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 TM4SF1P30408 202 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 PDE4DQ08499 809 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 CCDC178Q5BJE1 867 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 GALNT17Q6IS24 598 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 DHTKD1Q96HY7 919 aaPredicted RBP17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 TRIM9Q9C026 710 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 NYXQ9GZU5 481 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 KLRF2D3W0D1 207 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 PRPHP41219 470 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 MEA1Q16626 185 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 KIAA1328Q86T90 577 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 P2RX5Q93086 422 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 TCP11L1Q9NUJ3 509 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 SAR1BQ9Y6B6 198 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 DUSP10Q9Y6W6 482 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 CCDC88AQ3V6T2 1871 aa17.32■□□□□ 0.36
GTF3C1-205ENST00000564747 IRS2Q9Y4H2 1338 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 LRRIQ3A6PVS8 624 aaPredicted RBP17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 LAD1O00515 517 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 PTF1AQ7RTS3 328 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 MAPKAPK5Q8IW41 473 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 HPS3Q969F9 1004 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 CAPZA3Q96KX2 299 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 CNOT6LQ96LI5 555 aaKnown RBP17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 NHEJ1Q9H9Q4 299 aaPredicted RBP17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 FAN1Q9Y2M0 1017 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 SPATA31A5Q5VU36 1347 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 SPATA31A7Q8IWB4 1347 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 EIF3JO75822 258 aaKnown RBP17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 CCNE1P24864 410 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 NAPAP54920 295 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 ASIC1P78348 528 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 KRT83P78385 493 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 ZSCAN26Q16670 478 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 JAKMIP2Q96AA8 810 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 PCMTD1Q96MG8 357 aaPredicted RBP17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 GBP3Q9H0R5 595 aa17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 COL5A3P25940 1745 aaPredicted RBP17.31■□□□□ 0.36
GTF3C1-205ENST00000564747 OR52Z1P0C646 297 aa17.3■□□□□ 0.36
GTF3C1-205ENST00000564747 RASA1P20936 1047 aa17.3■□□□□ 0.36
GTF3C1-205ENST00000564747 TECP42680 631 aa17.3■□□□□ 0.36
GTF3C1-205ENST00000564747 CYP27A1Q02318 531 aa17.3■□□□□ 0.36
GTF3C1-205ENST00000564747 WDR93Q6P2C0 686 aa17.3■□□□□ 0.36
GTF3C1-205ENST00000564747 NOC3LQ8WTT2 800 aaKnown RBP17.3■□□□□ 0.36
GTF3C1-205ENST00000564747 ZMYND12Q9H0C1 365 aa17.3■□□□□ 0.36
GTF3C1-205ENST00000564747 PSD3Q9NYI0 1048 aa17.3■□□□□ 0.36
GTF3C1-205ENST00000564747 ANKIB1Q9P2G1 1089 aa17.3■□□□□ 0.36
GTF3C1-205ENST00000564747 PHACTR2O75167 634 aa17.3■□□□□ 0.36
GTF3C1-205ENST00000564747 MTIF2P46199 727 aaKnown RBP17.3■□□□□ 0.36
GTF3C1-205ENST00000564747 PAPD7Q5XG87 772 aaKnown RBP17.3■□□□□ 0.36
GTF3C1-205ENST00000564747 MSL3Q8N5Y2 521 aaKnown RBP17.3■□□□□ 0.36
GTF3C1-205ENST00000564747 CCDC102AQ96A19 550 aa17.3■□□□□ 0.36
GTF3C1-205ENST00000564747 NARFQ9UHQ1 456 aa17.3■□□□□ 0.36
GTF3C1-205ENST00000564747 ROBO1Q9Y6N7 1651 aa17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 SMCO2A6NFE2 343 aa17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 VGLL3A8MV65 326 aa17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 KRT86O43790 486 aa17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 USP14P54578 494 aa17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 MIIPQ5JXC2 388 aa17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 TPTE2Q6XPS3 522 aa17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 GPR101Q96P66 508 aaPredicted RBP17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 NOC4LQ9BVI4 516 aaKnown RBP17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 VAT1LQ9HCJ6 419 aa17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 ZNHIT6Q9NWK9 470 aaKnown RBP17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 NUTM2BA6NNL0 878 aaPredicted RBP17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 NUTM2EB1AL46 878 aaPredicted RBP17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 TUBBP07437 444 aa17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 CYLC1P35663 651 aaPredicted RBP17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 ZBED6P86452 979 aa17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 USP17L2Q6R6M4 530 aa17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 AMOTL1Q8IY63 956 aa17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 AK8Q96MA6 479 aa17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 CUEDC2Q9H467 287 aa17.29■□□□□ 0.36
GTF3C1-205ENST00000564747 NONOQ15233 471 aaKnown RBP eCLIP17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 TMED8Q6PL24 325 aaPredicted RBP17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 WDR66Q8TBY9 1149 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 C7orf25Q9BPX7 421 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 MMTAG2Q9BU76 263 aaKnown RBP17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 NUP58Q9BVL2 599 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 FEZ2Q9UHY8 353 aaPredicted RBP17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 ROBO3Q96MS0 1386 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 BICDL2A1A5D9 508 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 ZNF185O15231 689 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 ZPR1O75312 459 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 BAG3O95817 575 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 SEMA3FQ13275 785 aa17.28■□□□□ 0.36
GTF3C1-205ENST00000564747 CWC15Q9P013 229 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms