RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 PGK2P07205 417 aa18.52■□□□□ 0.56
RAB40C-208ENST00000564703 HOXC6P09630 235 aa18.52■□□□□ 0.56
RAB40C-208ENST00000564703 MFSD14CQ5VZR4 134 aa18.52■□□□□ 0.56
RAB40C-208ENST00000564703 NSMFQ6X4W1 530 aa18.52■□□□□ 0.56
RAB40C-208ENST00000564703 MCF2L2Q86YR7 1114 aa18.52■□□□□ 0.56
RAB40C-208ENST00000564703 PIBF1Q8WXW3 757 aa18.52■□□□□ 0.56
RAB40C-208ENST00000564703 PIGSQ96S52 555 aa18.52■□□□□ 0.56
RAB40C-208ENST00000564703 DIS3Q9Y2L1 958 aaKnown RBP18.52■□□□□ 0.56
RAB40C-208ENST00000564703 PCDHA1Q9Y5I3 950 aa18.52■□□□□ 0.56
RAB40C-208ENST00000564703 BAZ2BQ9UIF8 2168 aaKnown RBP18.52■□□□□ 0.56
RAB40C-208ENST00000564703 PFASO15067 1338 aa18.51■□□□□ 0.55
RAB40C-208ENST00000564703 POTEB2H3BUK9 544 aa18.51■□□□□ 0.55
RAB40C-208ENST00000564703 HMGCRP04035 888 aa18.51■□□□□ 0.55
RAB40C-208ENST00000564703 MUM1L1Q5H9M0 696 aa18.51■□□□□ 0.55
RAB40C-208ENST00000564703 SRBD1Q8N5C6 995 aaKnown RBP18.51■□□□□ 0.55
RAB40C-208ENST00000564703 NPLOC4Q8TAT6 608 aa18.51■□□□□ 0.55
RAB40C-208ENST00000564703 MTMR8Q96EF0 704 aa18.51■□□□□ 0.55
RAB40C-208ENST00000564703 IL17RAQ96F46 866 aa18.51■□□□□ 0.55
RAB40C-208ENST00000564703 ZNF274Q96GC6 653 aaPredicted RBP18.51■□□□□ 0.55
RAB40C-208ENST00000564703 TMEM106CQ9BVX2 250 aa18.51■□□□□ 0.55
RAB40C-208ENST00000564703 ALDH8A1Q9H2A2 487 aaPredicted RBP18.51■□□□□ 0.55
RAB40C-208ENST00000564703 PTPDC1A2A3K4 754 aa18.5■□□□□ 0.55
RAB40C-208ENST00000564703 CYTH3O43739 400 aa18.5■□□□□ 0.55
RAB40C-208ENST00000564703 PLEKHA8P1O95397 391 aa18.5■□□□□ 0.55
RAB40C-208ENST00000564703 MYCP01106 439 aaPredicted RBP18.5■□□□□ 0.55
RAB40C-208ENST00000564703 PDIA3P30101 505 aaKnown RBP18.5■□□□□ 0.55
RAB40C-208ENST00000564703 EVCP57679 992 aa18.5■□□□□ 0.55
RAB40C-208ENST00000564703 TOB2Q14106 344 aaPredicted RBP18.5■□□□□ 0.55
RAB40C-208ENST00000564703 TMTC3Q6ZXV5 915 aa18.5■□□□□ 0.55
RAB40C-208ENST00000564703 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.5■□□□□ 0.55
RAB40C-208ENST00000564703 CMTR1Q8N1G2 835 aaKnown RBP18.5■□□□□ 0.55
RAB40C-208ENST00000564703 ARMC5Q96C12 935 aa18.5■□□□□ 0.55
RAB40C-208ENST00000564703 MYH6P13533 1939 aa18.5■□□□□ 0.55
RAB40C-208ENST00000564703 PLXNB2O15031 1838 aa18.49■□□□□ 0.55
RAB40C-208ENST00000564703 INHAP05111 366 aa18.49■□□□□ 0.55
RAB40C-208ENST00000564703 RBM25P49756 843 aaKnown RBP18.49■□□□□ 0.55
RAB40C-208ENST00000564703 AKAP17AQ02040 695 aaKnown RBP18.49■□□□□ 0.55
RAB40C-208ENST00000564703 CCL14Q16627 93 aa18.49■□□□□ 0.55
RAB40C-208ENST00000564703 CPLX2Q6PUV4 134 aaKnown RBP18.49■□□□□ 0.55
RAB40C-208ENST00000564703 RNF207Q6ZRF8 634 aa18.49■□□□□ 0.55
RAB40C-208ENST00000564703 RGS22Q8NE09 1264 aa18.49■□□□□ 0.55
RAB40C-208ENST00000564703 TRIB2Q92519 343 aa18.49■□□□□ 0.55
RAB40C-208ENST00000564703 LARP6Q9BRS8 491 aaKnown RBP18.49■□□□□ 0.55
RAB40C-208ENST00000564703 BACH2Q9BYV9 841 aa18.49■□□□□ 0.55
RAB40C-208ENST00000564703 MAF1Q9H063 256 aa18.49■□□□□ 0.55
RAB40C-208ENST00000564703 A1CFQ9NQ94 594 aaKnown RBP18.49■□□□□ 0.55
RAB40C-208ENST00000564703 CYP39A1Q9NYL5 469 aa18.49■□□□□ 0.55
RAB40C-208ENST00000564703 CPLX1O14810 134 aa18.48■□□□□ 0.55
RAB40C-208ENST00000564703 ADD1P35611 737 aaKnown RBP18.48■□□□□ 0.55
RAB40C-208ENST00000564703 CCT2P78371 535 aaKnown RBP18.48■□□□□ 0.55
RAB40C-208ENST00000564703 BAATQ14032 418 aaPredicted RBP18.48■□□□□ 0.55
RAB40C-208ENST00000564703 ZNF792Q3KQV3 632 aa18.48■□□□□ 0.55
RAB40C-208ENST00000564703 OLFML2BQ68BL8 750 aa18.48■□□□□ 0.55
RAB40C-208ENST00000564703 MAML3Q96JK9 1138 aa18.48■□□□□ 0.55
RAB40C-208ENST00000564703 ZNF333Q96JL9 665 aa18.48■□□□□ 0.55
RAB40C-208ENST00000564703 V9GY48 417 aaPredicted RBP18.48■□□□□ 0.55
RAB40C-208ENST00000564703 SMCHD1A6NHR9 2005 aa18.47■□□□□ 0.55
RAB40C-208ENST00000564703 DNAJC25-GNG10A0A024R161 153 aa18.47■□□□□ 0.55
RAB40C-208ENST00000564703 B4DLN1 442 aa18.47■□□□□ 0.55
RAB40C-208ENST00000564703 NFIBO00712 420 aa18.47■□□□□ 0.55
RAB40C-208ENST00000564703 CALML3P27482 149 aa18.47■□□□□ 0.55
RAB40C-208ENST00000564703 CDC27P30260 824 aa18.47■□□□□ 0.55
RAB40C-208ENST00000564703 MRPL12P52815 198 aaKnown RBP18.47■□□□□ 0.55
RAB40C-208ENST00000564703 AK2P54819 239 aa18.47■□□□□ 0.55
RAB40C-208ENST00000564703 STK3Q13188 491 aa18.47■□□□□ 0.55
RAB40C-208ENST00000564703 SLC35G1Q2M3R5 365 aa18.47■□□□□ 0.55
RAB40C-208ENST00000564703 SAMD3Q8N6K7 520 aa18.47■□□□□ 0.55
RAB40C-208ENST00000564703 IL27Q8NEV9 243 aa18.47■□□□□ 0.55
RAB40C-208ENST00000564703 CLEC4DQ8WXI8 215 aa18.47■□□□□ 0.55
RAB40C-208ENST00000564703 MPHOSPH6Q99547 160 aaKnown RBP18.47■□□□□ 0.55
RAB40C-208ENST00000564703 RNF208Q9H0X6 261 aa18.47■□□□□ 0.55
RAB40C-208ENST00000564703 SLKQ9H2G2 1235 aaPredicted RBP18.47■□□□□ 0.55
RAB40C-208ENST00000564703 HMX1Q9NP08 348 aaPredicted RBP18.47■□□□□ 0.55
RAB40C-208ENST00000564703 ADD3Q9UEY8 706 aaKnown RBP18.47■□□□□ 0.55
RAB40C-208ENST00000564703 CFBP00751 764 aa18.46■□□□□ 0.55
RAB40C-208ENST00000564703 TAL1P17542 331 aaPredicted RBP18.46■□□□□ 0.55
RAB40C-208ENST00000564703 CNTN2Q02246 1040 aa18.46■□□□□ 0.55
RAB40C-208ENST00000564703 ZNF467Q7Z7K2 595 aaPredicted RBP18.46■□□□□ 0.55
RAB40C-208ENST00000564703 MSL3Q8N5Y2 521 aaKnown RBP18.46■□□□□ 0.55
RAB40C-208ENST00000564703 TINF2Q9BSI4 451 aa18.46■□□□□ 0.55
RAB40C-208ENST00000564703 FAM217BQ9NTX9 383 aaPredicted RBP18.46■□□□□ 0.55
RAB40C-208ENST00000564703 MAP3K20Q9NYL2 800 aaKnown RBP18.46■□□□□ 0.55
RAB40C-208ENST00000564703 FLRT1Q9NZU1 646 aa18.46■□□□□ 0.55
RAB40C-208ENST00000564703 RBM27Q9P2N5 1060 aaKnown RBP18.46■□□□□ 0.55
RAB40C-208ENST00000564703 RPTORQ8N122 1335 aa18.46■□□□□ 0.55
RAB40C-208ENST00000564703 hCG_1642624A0A1W2PR95 340 aa18.45■□□□□ 0.54
RAB40C-208ENST00000564703 ASB14A6NK59 587 aa18.45■□□□□ 0.54
RAB40C-208ENST00000564703 PPP1R11O60927 126 aaPredicted RBP18.45■□□□□ 0.54
RAB40C-208ENST00000564703 CCL5P13501 91 aa18.45■□□□□ 0.54
RAB40C-208ENST00000564703 PRKAR2AP13861 404 aaKnown RBP18.45■□□□□ 0.54
RAB40C-208ENST00000564703 CNGA1P29973 690 aa18.45■□□□□ 0.54
RAB40C-208ENST00000564703 CYP2C19P33261 490 aa18.45■□□□□ 0.54
RAB40C-208ENST00000564703 RPS6P62753 249 aaKnown RBP18.45■□□□□ 0.54
RAB40C-208ENST00000564703 CACNB2Q08289 660 aaPredicted RBP18.45■□□□□ 0.54
RAB40C-208ENST00000564703 FAM133AQ8N9E0 248 aa18.45■□□□□ 0.54
RAB40C-208ENST00000564703 CNPY2Q9Y2B0 182 aa18.45■□□□□ 0.54
RAB40C-208ENST00000564703 RABEP1Q15276 862 aa18.44■□□□□ 0.54
RAB40C-208ENST00000564703 MTFR1Q15390 333 aa18.44■□□□□ 0.54
RAB40C-208ENST00000564703 NOL8Q76FK4 1167 aaKnown RBP18.44■□□□□ 0.54
RAB40C-208ENST00000564703 HEATR3Q7Z4Q2 680 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms