RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 C8orf37Q96NL8 207 aa6.78□□□□□ -1.32
CHD9-210ENST00000564582 FEZ1Q99689 392 aa6.78□□□□□ -1.32
CHD9-210ENST00000564582 DSCC1Q9BVC3 393 aa6.78□□□□□ -1.32
CHD9-210ENST00000564582 PRDM7Q9NQW5 492 aa6.78□□□□□ -1.32
CHD9-210ENST00000564582 ACTR10Q9NZ32 417 aa6.78□□□□□ -1.32
CHD9-210ENST00000564582 SLAMF8Q9P0V8 285 aa6.78□□□□□ -1.32
CHD9-210ENST00000564582 ADAMTS6Q9UKP5 1117 aa6.78□□□□□ -1.32
CHD9-210ENST00000564582 R3HCC1Q9Y3T6 440 aaKnown RBP6.78□□□□□ -1.32
CHD9-210ENST00000564582 PCDHA11Q9Y5I1 949 aa6.78□□□□□ -1.32
CHD9-210ENST00000564582 NPC1L1Q9UHC9 1359 aa6.78□□□□□ -1.32
CHD9-210ENST00000564582 CTTNBP2Q8WZ74 1663 aa6.77□□□□□ -1.32
CHD9-210ENST00000564582 LTBP3Q9NS15 1303 aa6.77□□□□□ -1.32
CHD9-210ENST00000564582 YEATS2Q9ULM3 1422 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 CCDC66A2RUB6 948 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 WASH4PA8MWX3 477 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 ITGA4P13612 1032 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 JUNBP17275 347 aaPredicted RBP6.77□□□□□ -1.33
CHD9-210ENST00000564582 ENDOUP21128 410 aaKnown RBP6.77□□□□□ -1.33
CHD9-210ENST00000564582 NUCB2P80303 420 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 SLC20A2Q08357 652 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 KLHL40Q2TBA0 621 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 NBPF8Q3BBV2 869 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 AXDND1Q5T1B0 1012 aaPredicted RBP6.77□□□□□ -1.33
CHD9-210ENST00000564582 HEATR6Q6AI08 1181 aaKnown RBP6.77□□□□□ -1.33
CHD9-210ENST00000564582 ATG4DQ86TL0 474 aaPredicted RBP6.77□□□□□ -1.33
CHD9-210ENST00000564582 PPFIBP1Q86W92 1011 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 MCF2L2Q86YR7 1114 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 SMC5Q8IY18 1101 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 FAM169BQ8N8A8 192 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 LRRN4CLQ8ND94 238 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 TCTN2Q96GX1 697 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 CARD11Q9BXL7 1154 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 GBP3Q9H0R5 595 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 FAM86C1Q9NVL1 165 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 GFOD1Q9NXC2 390 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 PRKAG3Q9UGI9 489 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 TMEM59LQ9UK28 342 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 VIRMAQ69YN4 1812 aaKnown RBP6.77□□□□□ -1.33
CHD9-210ENST00000564582 SNAPC4Q5SXM2 1469 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 KDM5CP41229 1560 aa6.77□□□□□ -1.33
CHD9-210ENST00000564582 ARHGAP31Q2M1Z3 1444 aa6.76□□□□□ -1.33
CHD9-210ENST00000564582 RBAK-RBAKDNI3L0D1 243 aa6.76□□□□□ -1.33
CHD9-210ENST00000564582 SMAD7O15105 426 aaKnown RBP6.76□□□□□ -1.33
CHD9-210ENST00000564582 NAT2P11245 290 aa6.76□□□□□ -1.33
CHD9-210ENST00000564582 RAC2P15153 192 aa6.76□□□□□ -1.33
CHD9-210ENST00000564582 CD247P20963 164 aa6.76□□□□□ -1.33
CHD9-210ENST00000564582 CDK11BP21127 795 aaKnown RBP6.76□□□□□ -1.33
CHD9-210ENST00000564582 ZNF445P59923 1031 aa6.76□□□□□ -1.33
CHD9-210ENST00000564582 DUSP4Q13115 394 aa6.76□□□□□ -1.33
CHD9-210ENST00000564582 DCAF15Q66K64 600 aa6.76□□□□□ -1.33
CHD9-210ENST00000564582 CWF19L1Q69YN2 538 aaKnown RBP6.76□□□□□ -1.33
CHD9-210ENST00000564582 MCTP1Q6DN14 999 aa6.76□□□□□ -1.33
CHD9-210ENST00000564582 VHLLQ6RSH7 139 aa6.76□□□□□ -1.33
CHD9-210ENST00000564582 TRMT2AQ8IZ69 625 aaKnown RBP6.76□□□□□ -1.33
CHD9-210ENST00000564582 FAM184AQ8NB25 1140 aa6.76□□□□□ -1.33
CHD9-210ENST00000564582 IPO4Q8TEX9 1081 aaKnown RBP6.76□□□□□ -1.33
CHD9-210ENST00000564582 CWC22Q9HCG8 908 aaKnown RBP6.76□□□□□ -1.33
CHD9-210ENST00000564582 TCFL5Q9UL49 500 aa6.76□□□□□ -1.33
CHD9-210ENST00000564582 NKTRP30414 1462 aaKnown RBP6.76□□□□□ -1.33
CHD9-210ENST00000564582 GRIN2BQ13224 1484 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 GSNP06396 782 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 HSP90AB1P08238 724 aaKnown RBP6.75□□□□□ -1.33
CHD9-210ENST00000564582 TAL1P17542 331 aaPredicted RBP6.75□□□□□ -1.33
CHD9-210ENST00000564582 GTF2F1P35269 517 aaKnown RBP eCLIP6.75□□□□□ -1.33
CHD9-210ENST00000564582 GDNFP39905 211 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 AFMP43652 599 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 CHAF1AQ13111 956 aaPredicted RBP6.75□□□□□ -1.33
CHD9-210ENST00000564582 NCAPHQ15003 741 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 LINC00116Q8NCU8 138 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 FLAD1Q8NFF5 587 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 SYAP1Q96A49 352 aaPredicted RBP6.75□□□□□ -1.33
CHD9-210ENST00000564582 HAUS7Q99871 368 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 C22orf23Q9BZE7 217 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 ZNF408Q9H9D4 720 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 GP6Q9HCN6 339 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 DIAPH3Q9NSV4 1193 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 WHRNQ9P202 907 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 ZKSCAN5Q9Y2L8 839 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 SF3B6Q9Y3B4 125 aaKnown RBP6.75□□□□□ -1.33
CHD9-210ENST00000564582 KIF3AQ9Y496 699 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 FHOD1Q9Y613 1164 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 PRDM2Q13029 1718 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 USP19O94966 1318 aa6.75□□□□□ -1.33
CHD9-210ENST00000564582 A0A087WZG4 1122 aa6.74□□□□□ -1.33
CHD9-210ENST00000564582 MEIS1O00470 390 aa6.74□□□□□ -1.33
CHD9-210ENST00000564582 SHOXO15266 292 aa6.74□□□□□ -1.33
CHD9-210ENST00000564582 SYPP08247 313 aa6.74□□□□□ -1.33
CHD9-210ENST00000564582 ETFBP38117 255 aa6.74□□□□□ -1.33
CHD9-210ENST00000564582 RGS3P49796 1198 aa6.74□□□□□ -1.33
CHD9-210ENST00000564582 SLFN5Q08AF3 891 aa6.74□□□□□ -1.33
CHD9-210ENST00000564582 KIAA2012Q0VF49 1180 aa6.74□□□□□ -1.33
CHD9-210ENST00000564582 RAB3GAP1Q15042 981 aa6.74□□□□□ -1.33
CHD9-210ENST00000564582 SYCP1Q15431 976 aa6.74□□□□□ -1.33
CHD9-210ENST00000564582 FXNQ16595 210 aa6.74□□□□□ -1.33
CHD9-210ENST00000564582 LARP1BQ659C4 914 aaKnown RBP6.74□□□□□ -1.33
CHD9-210ENST00000564582 KIAA1211LQ6NV74 962 aa6.74□□□□□ -1.33
CHD9-210ENST00000564582 OXR1Q8N573 874 aa6.74□□□□□ -1.33
CHD9-210ENST00000564582 USHBP1Q8N6Y0 703 aa6.74□□□□□ -1.33
CHD9-210ENST00000564582 ASIC4Q96FT7 647 aa6.74□□□□□ -1.33
CHD9-210ENST00000564582 PDLIM2Q96JY6 352 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms