RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 EPHB1P54762 984 aa3.53□□□□□ -1.85
CHD9-209ENST00000564255 SCRN1Q12765 414 aa3.53□□□□□ -1.85
CHD9-209ENST00000564255 FAM50AQ14320 339 aaKnown RBP3.53□□□□□ -1.85
CHD9-209ENST00000564255 MBTPS1Q14703 1052 aa3.53□□□□□ -1.85
CHD9-209ENST00000564255 E4F1Q66K89 784 aaPredicted RBP3.53□□□□□ -1.85
CHD9-209ENST00000564255 ZCCHC8Q6NZY4 707 aaKnown RBP3.53□□□□□ -1.85
CHD9-209ENST00000564255 KCNT2Q6UVM3 1135 aa3.53□□□□□ -1.85
CHD9-209ENST00000564255 BEND7Q8N7W2 519 aaPredicted RBP3.53□□□□□ -1.85
CHD9-209ENST00000564255 DAGLBQ8NCG7 672 aa3.53□□□□□ -1.85
CHD9-209ENST00000564255 HEXIM2Q96MH2 286 aaKnown RBP3.53□□□□□ -1.85
CHD9-209ENST00000564255 FAM83CQ9BQN1 747 aa3.53□□□□□ -1.85
CHD9-209ENST00000564255 SLC12A9Q9BXP2 914 aa3.53□□□□□ -1.85
CHD9-209ENST00000564255 SLC5A4Q9NY91 659 aa3.53□□□□□ -1.85
CHD9-209ENST00000564255 TPX2Q9ULW0 747 aaKnown RBP3.53□□□□□ -1.85
CHD9-209ENST00000564255 RNF112Q9ULX5 631 aa3.53□□□□□ -1.85
CHD9-209ENST00000564255 SHISA3A0PJX4 238 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 THBDP07204 575 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 FAM87AP0C7U9 286 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 STAT4Q14765 748 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 RCSD1Q6JBY9 416 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 OGFOD3Q6PK18 319 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 ALYREFQ86V81 257 aaKnown RBP3.52□□□□□ -1.85
CHD9-209ENST00000564255 CLEC10AQ8IUN9 316 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 IFNL3Q8IZI9 196 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 UTP4Q969X6 686 aaKnown RBP3.52□□□□□ -1.85
CHD9-209ENST00000564255 PRDM5Q9NQX1 630 aaPredicted RBP3.52□□□□□ -1.85
CHD9-209ENST00000564255 GPR27Q9NS67 375 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 GTF2IRD1Q9UHL9 959 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 TMEFF2Q9UIK5 374 aaPredicted RBP3.52□□□□□ -1.85
CHD9-209ENST00000564255 MINPP1Q9UNW1 487 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 TRAF6Q9Y4K3 522 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 FAM181BA6NEQ2 426 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 CBX4O00257 560 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 WIPF1O43516 503 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 ZEB2O60315 1214 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 KPNA6O60684 536 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 ZNF205O95201 554 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 CRTAMO95727 393 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 CBX7O95931 251 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 CKMP06732 381 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 RXRBP28702 533 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 BMP8BP34820 402 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 MCL1Q07820 350 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 TNK2Q07912 1038 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 TTF1Q15361 905 aaPredicted RBP3.52□□□□□ -1.85
CHD9-209ENST00000564255 NFKBIBQ15653 356 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 DPY19L1Q2PZI1 675 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 CFAP100Q494V2 611 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 SPATS2Q86XZ4 545 aaKnown RBP3.52□□□□□ -1.85
CHD9-209ENST00000564255 WDR66Q8TBY9 1149 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 PUS7LQ9H0K6 701 aaKnown RBP3.52□□□□□ -1.85
CHD9-209ENST00000564255 BACE2Q9Y5Z0 518 aa3.52□□□□□ -1.85
CHD9-209ENST00000564255 MEFVO15553 781 aaPredicted RBP3.51□□□□□ -1.85
CHD9-209ENST00000564255 KATNA1O75449 491 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 JMJD7P0C870 316 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 NOP2P46087 812 aaKnown RBP3.51□□□□□ -1.85
CHD9-209ENST00000564255 MECP2P51608 486 aaKnown RBP3.51□□□□□ -1.85
CHD9-209ENST00000564255 STRN3Q13033 797 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 PIK3R6Q5UE93 754 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 ABHD17CQ6PCB6 329 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 PODNQ7Z5L7 613 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 TXNRD3Q86VQ6 643 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 PPIL6Q8IXY8 311 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 ZNF655Q8N720 491 aaPredicted RBP3.51□□□□□ -1.85
CHD9-209ENST00000564255 OR2W6PQ8NHA6 318 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 FCRL3Q96P31 734 aaPredicted RBP3.51□□□□□ -1.85
CHD9-209ENST00000564255 MMP19Q99542 508 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 DUSP15Q9H1R2 295 aaPredicted RBP3.51□□□□□ -1.85
CHD9-209ENST00000564255 IFT22Q9H7X7 185 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 TCEAL9Q9UHQ7 104 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 PCDHA9Q9Y5H5 950 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 C2orf71A6NGG8 1288 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 K7ESF4 209 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 TRAF5O00463 557 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 VAV1P15498 845 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 MTMR1Q13613 665 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 IQCEQ6IPM2 695 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 CRTC3Q6UUV7 619 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 LBX2Q6XYB7 198 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 BEND4Q6ZU67 534 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 PHF20Q9BVI0 1012 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 ASCC2Q9H1I8 757 aaPredicted RBP3.51□□□□□ -1.85
CHD9-209ENST00000564255 SAMD15Q9P1V8 674 aa3.51□□□□□ -1.85
CHD9-209ENST00000564255 APOBEC2Q9Y235 224 aaKnown RBP3.51□□□□□ -1.85
CHD9-209ENST00000564255 CCDC194A0A1B0GVG4 234 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 PRR33A8MZF0 331 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 TSPAN6O43657 245 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 GLRX3O76003 335 aaKnown RBP3.5□□□□□ -1.85
CHD9-209ENST00000564255 F2P00734 622 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 CD3EP07766 207 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 ADMP35318 185 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 RTP2Q5QGT7 225 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 CWF19L1Q69YN2 538 aaKnown RBP3.5□□□□□ -1.85
CHD9-209ENST00000564255 DDX53Q86TM3 631 aaKnown RBP3.5□□□□□ -1.85
CHD9-209ENST00000564255 CCDC103Q8IW40 242 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 USHBP1Q8N6Y0 703 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 PI4K2BQ8TCG2 481 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 USP7Q93009 1102 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 TCTN2Q96GX1 697 aa3.5□□□□□ -1.85
CHD9-209ENST00000564255 TTC1Q99614 292 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms