RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 SMCR8Q8TEV9 937 aaPredicted RBP13.91□□□□□ -0.18
COMMD4-209ENST00000564068 MLXIPQ9HAP2 919 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 CPSF2Q9P2I0 782 aaKnown RBP13.91□□□□□ -0.18
COMMD4-209ENST00000564068 L1RE1Q9UN81 338 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 NOVA2Q9UNW9 492 aaKnown RBP13.91□□□□□ -0.18
COMMD4-209ENST00000564068 UBN2Q6ZU65 1347 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 LIFRP42702 1097 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 FOXR1Q6PIV2 292 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 SAP30BPQ9UHR5 308 aaKnown RBP13.91□□□□□ -0.18
COMMD4-209ENST00000564068 FLOT1O75955 427 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 RXRBP28702 533 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 KIF11P52732 1056 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 CORO7P57737 925 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 GRIN1Q05586 938 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 NR1I3Q14994 352 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 KCNB2Q92953 911 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 ATP6V0A2Q9Y487 856 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 PCDHA13Q9Y5I0 950 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 A0A1B0GTH6 734 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 ECM2O94769 699 aaPredicted RBP13.9□□□□□ -0.18
COMMD4-209ENST00000564068 PDE8BO95263 885 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 GUCY1A3Q02108 690 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 NFRKBQ6P4R8 1299 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 ERMNQ8TAM6 284 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 P2RX5Q93086 422 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 TRIM7Q9C029 511 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 SLC24A3Q9HC58 644 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 SNAP23O00161 211 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 SPOPO43791 374 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 PRCPP42785 496 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 IRAK1P51617 712 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 LRRC41Q15345 812 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 LRRC31Q6UY01 552 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 GSTA5Q7RTV2 222 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 PIH1D3Q9NQM4 214 aaKnown RBP13.9□□□□□ -0.18
COMMD4-209ENST00000564068 MTUS1Q9ULD2 1270 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 ATP8A1Q9Y2Q0 1164 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 CD2APQ9Y5K6 639 aa13.9□□□□□ -0.18
COMMD4-209ENST00000564068 NCK2O43639 380 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 TNFAIP3P21580 790 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 LONP1P36776 959 aaKnown RBP13.89□□□□□ -0.19
COMMD4-209ENST00000564068 EIF6P56537 245 aaKnown RBP13.89□□□□□ -0.19
COMMD4-209ENST00000564068 RASGRP2Q7LDG7 609 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 U2AF1L4Q8WU68 220 aaKnown RBP13.89□□□□□ -0.19
COMMD4-209ENST00000564068 PRM3Q9NNZ6 103 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 CEP83Q9Y592 693 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 SETBP1Q9Y6X0 1596 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 BACH1O14867 736 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 ZRANB2O95218 330 aaKnown RBP eCLIP13.89□□□□□ -0.19
COMMD4-209ENST00000564068 GOLGA8HP0CJ92 632 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 GUCY2CP25092 1073 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 SCARF1Q14162 830 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 LRRC1Q9BTT6 524 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 CLTCQ00610 1675 aaKnown RBP13.89□□□□□ -0.19
COMMD4-209ENST00000564068 CYP2D7A0A087X1C5 515 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 POTEJP0CG39 1038 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 PLCB3Q01970 1234 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 FAM133BQ5BKY9 247 aaKnown RBP13.89□□□□□ -0.19
COMMD4-209ENST00000564068 CCDC105Q8IYK2 499 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 RETREG2Q8NC44 543 aa13.89□□□□□ -0.19
COMMD4-209ENST00000564068 NAP1L3Q99457 506 aaPredicted RBP13.89□□□□□ -0.19
COMMD4-209ENST00000564068 BIN2Q9UBW5 565 aaPredicted RBP13.89□□□□□ -0.19
COMMD4-209ENST00000564068 ADD3Q9UEY8 706 aaKnown RBP13.89□□□□□ -0.19
COMMD4-209ENST00000564068 LRRIQ3A6PVS8 624 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-209ENST00000564068 MCAMP43121 646 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 TMEM132AQ24JP5 1023 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 HS2ST1Q7LGA3 356 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 CXorf56Q9H5V9 222 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 TRPC5Q9UL62 973 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-209ENST00000564068 AXIN2Q9Y2T1 843 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 SOS2Q07890 1332 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-209ENST00000564068 CIAO1O76071 339 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 MXRA7P84157 204 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 PICALMQ13492 652 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 CCDC197Q8NCU1 140 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 GPCPD1Q9NPB8 672 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 CTTNBP2NLQ9P2B4 639 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 NEDD4P46934 1319 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 SEMA3EO15041 775 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 DHX9Q08211 1270 aaKnown RBP13.88□□□□□ -0.19
COMMD4-209ENST00000564068 CALCRLQ16602 461 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 LMNTD2Q8IXW0 634 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 LCORLQ8N3X6 602 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 AP1M1Q9BXS5 423 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.88□□□□□ -0.19
COMMD4-209ENST00000564068 ASIC3Q9UHC3 531 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 ADAMTS1Q9UHI8 967 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 FAM205CA6NFA0 338 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 SMCO2A6NFE2 343 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 CTSWP56202 376 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 LLGL1Q15334 1064 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 SEL1L2Q5TEA6 688 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 HNRNPLLQ8WVV9 542 aaKnown RBP13.88□□□□□ -0.19
COMMD4-209ENST00000564068 FAM212AQ96EL1 285 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 INTS9Q9NV88 658 aaKnown RBP13.88□□□□□ -0.19
COMMD4-209ENST00000564068 HPCAL4Q9UM19 191 aa13.88□□□□□ -0.19
COMMD4-209ENST00000564068 IQGAP1P46940 1657 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 LGALS16A8MUM7 142 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 PLEKHA8P1O95397 391 aa13.87□□□□□ -0.19
COMMD4-209ENST00000564068 GYPCP04921 128 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms